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Database-ID

Resolution

Resolution Method

CTF correction

3D reconstruction Algorithm

3D reconstruction Software

PDB-2b6o1.9
PDB-4a822.0
PDB-3m9i2.5
PDB-2zz92.8
PDB-1tvk2.89
PDB-1at93.0
PDB-1sor3.0
PDB-2at93.0
EMDB-52563.1FSC 0.143EACH PARTICLEcommon lineIMIRS
PDB-3izx3.1FSC 0.143EACH PARTICLEcommon lineIMIRS
PDB-1fbb3.2
PDB-1fbk3.2
PDB-2d573.2
PDB-2h8a3.2CrystallographicCRYSTALLOGRAPHY
EMDB-51603.3FSC 0.143EACH PARTICLEFourier Space ReconstructionFrealign, IMIRS
EMDB-51853.3FSC 0.5EMANIHRSRIHRSR, EMAN
EMDB-56233.3FSC 0.143 , and Gold Standard FSCEACH PARTICLEFREALIGN
PDB-3iyl3.3FSC 0.143EACH PARTICLEFourier Space ReconstructionFrealign, IMIRS
PDB-3j063.3TruncationIHRSRIHRSR, EMAN
EMDB-17523.5Comparison with X-ray mapPHASE FLIP > EACH PARTICLERIco, FPMRIco
EMDB-22783.5FSC 0.143EACH PARTICLEcommon lineIMIRS
EMDB-54953.5FSC 0.143EACH PARTICLEprojection matchingEMAN, Frealign
PDB-1brd3.5
PDB-1jff3.5
PDB-2brd3.5
PDB-3dww3.5
PDB-3j263.5FSC 0.143EACH PARTICLEprojection matchingEMAN, Frealign
PDB-1h6i3.54
EMDB-51563.6FSC 0.143ctfilt3 with EACH PARTICLE adjustmentcentral sectionsfrealign
EMDB-51723.6FSC 0.5EACH PARTICLEcommon lineIMIRS
EMDB-54993.6FSC 0.143EMAN per particle, with astigmatism compensationMPSAEMAN
EMDB-55203.6FSC 0.143EMAN per particle, with astigmatism compensationMPSAEMAN
PDB-3iyn3.6FSC 0.5EACH PARTICLEcommon lineIMIRS
PDB-3izo3.6common line for orientation, center refinement icosahedral symmetry-adapted functions for 3D reconstructionIMIRS
PDB-3j273.6FSC 0.143EMAN, per particle, with astigmatism compensationMPSAEMAN
PDB-3j2p3.6FSC 0.143EMAN, per particle, with astigmatism compensationMPSAEMAN
PDB-1ih53.7
PDB-1tub3.7
EMDB-14613.8Comparison with X-ray mapEACH PARTICLEFREALIGN randomized searchFREALIGN
EMDB-18243.8FSC 0.5EACH PARTICLEFourierEMAN
EMDB-51993.8FSC 0.143EACH PARTICLEprojection matchingfrealign
EMDB-54963.8FSC 0.143EACH PARTICLEprojection matchingEMAN, Frealign
PDB-1fqy3.8
PDB-2xyy3.8EACH PARTICLEFOURIER
PDB-3gzt3.8EACH PARTICLEprojection matching, refinement using FREALIGN
PDB-3gzu3.8EACH PARTICLE CTFprojection matching, refinement using FEALIGN
PDB-3iyu3.8FSC 0.143EACH PARTICLEprojection matchingfrealign
PDB-3n093.8EACH PARTICLEprojection matching
EMDB-15083.88FSC 0.5EACH PARTICLEFourier common line, FOURIER BESSELsynthesisIMIRS
PDB-3cnf3.88EACH PARTICLEFOURIER common line, FOURIER- BESSEL SYNTHESIS
EMDB-52333.9FSC 0.143EACH FILM/CCDcommon lineIMIRS
EMDB-55993.9Gold-standard FSC 0.143 and feature basedeach WHOLE FILM/CCDprojection matching, Fourier reconstructionEMAN, EMAN, XMIPP
PDB-3iz33.9FSC 0.143EACH FILM/CCDcommon lineIMIRS
EMDB-10444.0FSC 0.5Measurement of positions of Thon rings from area of tube that was processedHOME MADE , MRC
EMDB-16414.0Figure of meritEach filamenthelical RECONSTRUCTIONHOME MADE
EMDB-18264.0FSC 0.5EACH PARTICLEFourierEMAN
EMDB-51484.0FSC 0.5EACH FILM/CCDprojection matchingEMAN
PDB-1oed4.0
PDB-1ucu4.0AMPLITUDE AND PHASEhelical RECONSTRUCTION
PDB-2bg94.0
PDB-2xyz4.0EACH PARTICLEFOURIER
PDB-3a5x4.0AMPLITUDE AND PHASEhelical RECONSTRUCTION
PDB-3iyg4.0FSC 0.5EACH FILM/CCDprojection matchingEMAN
PDB-3ktt4.0FSC at 0.5 cut-offprojection matching
PDB-3zfs4.0EACH FILM/CCDREFINEMENT IN EMAN2
EMDB-53764.1feature basedeach imagecommon lineIMIRS, ISAF
PDB-3j174.1feature basedeach imagecommon lineIMIRS, ISAF
EMDB-16094.2FSC 0.143EACH PARTICLEprojection matchingFREALIGN
EMDB-50014.2FSC 0.5EACH FILM/CCDprojection matchingEMAN
EMDB-51554.2FSC 0.143ctfilt3 with EACH PARTICLE adjustmentcentral sectionsfrealign
PDB-3cau4.2EACH FILM/CCDEMAN, single particle
PDB-3iyj4.2CTFILT3 WITH EACH PARTICLE ADJUSTMENTCENTRAL SECTIONS
EMDB-51374.3FSC 0.5EACH FILM/CCDprojection matchingEMAN
PDB-3los4.3FSC 0.5EACH FILM/CCDprojection matchingEMAN
EMDB-13164.45.0CTFFIND and CTFTILT phase-correction and amplitude-weighting of each paritcle after Grigorieff 1998SIRT - iterative algebraic reconstructionSpider
EMDB-23644.4FSC 0.5Particles from EACH FILM/CCDEMAN, BSOFT
EMDB-54884.4FSC 0.143EACH PARTICLEprojection matchingFrealign, Uppsala_
PDB-2om34.4Phase correction and amplitude weighting adapted from Grigorieff 1998(after determination of CTF and specimen tilt)single particle helical RECONSTRUCTION
EMDB-16534.5Feature basedEACH FILM/CCDcommon lineIMIRS
EMDB-20964.5feature-basedEACH FILM/CCDEMAN
EMDB-20974.5feature-basedEACH FILM/CCDEMAN
EMDB-21424.5FSC 0.143WIENER FILTER weighting EACH PARTICLE during 3D reconstructionMPSAGPU-adapted, EMAN, EMAN
EMDB-22724.5common lineISAFs
EMDB-22734.5Each imagecommon lineISAFs
EMDB-22754.5gold-standard FSC 0.143each imageCTFFIND, RELION
EMDB-50034.5FSC 0.5EACH PARTICLEicosahedralEMAN
EMDB-54154.5FSC 0.143CTF was estimated using Appion softwareFREALIGN
EMDB-55844.5FSC 0.143 . The reported resolution is for the entire reconstruction. The resolution of the coat subunit region (B345) is estimated to 3.9 A using the same criterionEACH PARTICLEprojection matchingFrealign
EMDB-55854.5FSC 0.5EACH FILM/CCDprojection matchingEMAN
EMDB-55864.5FSC 0.5EACH FILM/CCDprojection matchingEMAN
PDB-3c5b4.5EACH PARTICLEEMAN icosahedral virus reconstruction
PDB-3j1q4.5FSC 0.143CTF was estimated using Appion softwaresingle particle, icosahedralFREALIGN
PDB-3j314.5FSC 0.143 . The reported resolution is for the entire reconstruction. The resolution of the coat subunit region (B345) is estimated to 3.9 A using the same criterionEACH PARTICLEprojection matchingFrealign
PDB-3j324.5FSC 0.5EACH FILM/CCDprojection matchingEMAN
PDB-3k1q4.5Fully corrected. See Zhou et al., 1999, J. Virol. 73, 3210-3218
EMDB-17134.6FSC 0.5EACH FILM/CCDcommon lineMPSA
EMDB-17304.6FSC 0.5EACH PARTICLE was fully CTF correctedprojection matchingSPIDER, IMAGIC
EMDB-22764.6gold-standard FSC 0.143each imageCTFFIND, RELION
PDB-2xd84.6EACH FILM/CCDcommon line
PDB-2xea4.6EACH PARTICLE WAS FULLY CTF CORRECTEDprojection matching

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