[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,313 items for (keywords: recombinant & proteins)

PDB-8wy8:
Cryo-EM structure of DSR2 apo complex

PDB-8wy9:
Cryo-EM structure of DSR2 apo (partial) complex

PDB-8wya:
Cryo-EM structure of DSR2-tube complex

PDB-8wyb:
Cryo-EM structure of DSR2 (H171A)-tube-NAD+ complex

PDB-8wyc:
Cryo-EM structure of DSR2 (H171A)-tube-NAD+ (partial) complex

PDB-8wyd:
Cryo-EM structure of DSR2-DSAD1 complex

PDB-8wye:
Cryo-EM structure of DSR2-DSAD1 (partial) complex

PDB-8wyf:
Cryo-EM structure of DSR2-DSAD1-NAD+ (partial) complex


EMDB entry, No image

EMDB-19497:
Cryo-EM reconstruction of the formin Cdc12 bound to the barbed end of F-actin (without phalloidin)


EMDB entry, No image

EMDB-19503:
Structure of the F-actin barbed end bound by formin mDia1

PDB-8ru2:
Structure of the F-actin barbed end bound by formin mDia1

PDB-8tl6:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF5

PDB-8qgy:
Cryo-EM structure of C-terminally truncated Apoptosis signal-regulating kinase 1 (ASK1)

PDB-8rox:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 12

PDB-8roy:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 24

PDB-8sl3:
Human adenylyl Cyclase 5 in complex with Gbg

PDB-8r5x:
Structure of coxsackievirus B5 capsid (mutant CVB5F.cas.genogroupB) - F particle

PDB-8r5y:
Structure of coxsackievirus B5 capsid (mutant CVB5F.cas.genogroupB) - A particle

PDB-8r5z:
Structure of coxsackievirus B5 capsid (mutant CVB5F.cas.genogroupB) - E particle

PDB-8twv:
ELIC5 with Propylamine in spNW15 nanodiscs with 2:1:1 POPC:POPE:POPG

PDB-8twz:
ELIC with Propylamine in spNW15 nanodiscs with 2:1:1 POPC:POPE:POPG

PDB-8glt:
Backbone model of de novo-designed chlorophyll-binding nanocage O32-15

PDB-8y6o:
Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U11 and tri-snRNP part

EMDB-42812:
PNMA2 capsid, overall icosahedral map

EMDB-42815:
PNMA2 capsid, focussed refinement of a pentamer (C5 symmetry)

PDB-8uyo:
Structure of a recombinant human PNMA2 capsid

PDB-8iyx:
Cryo-EM structure of the GPR34 receptor in complex with the antagonist YL-365

PDB-8y7e:
Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U12 snRNP part

PDB-8rc1:
MAP7 MTBD (microtubule binding domain) decorated microtubule protofilament

PDB-8ge5:
CryoEM structure of beta-2-adrenergic receptor in complex with nucleotide-free Gs heterotrimer (#6 of 20)

PDB-8ge6:
CryoEM structure of beta-2-adrenergic receptor in complex with nucleotide-free Gs heterotrimer (#7 of 20)

PDB-8ge7:
CryoEM structure of beta-2-adrenergic receptor in complex with nucleotide-free Gs heterotrimer (#8 of 20)

PDB-8ge8:
CryoEM structure of beta-2-adrenergic receptor in complex with nucleotide-free Gs heterotrimer (#9 of 20)

PDB-8ge9:
CryoEM structure of beta-2-adrenergic receptor in complex with nucleotide-free Gs heterotrimer (#10 of 20)

PDB-8gea:
CryoEM structure of beta-2-adrenergic receptor in complex with nucleotide-free Gs heterotrimer (#11 of 20)

PDB-8geb:
CryoEM structure of beta-2-adrenergic receptor in complex with nucleotide-free Gs heterotrimer (#12 of 20)

PDB-8gec:
CryoEM structure of beta-2-adrenergic receptor in complex with nucleotide-free Gs heterotrimer (#13 of 20)

PDB-8ged:
CryoEM structure of beta-2-adrenergic receptor in complex with nucleotide-free Gs heterotrimer (#14 of 20)

PDB-8gee:
CryoEM structure of beta-2-adrenergic receptor in complex with nucleotide-free Gs heterotrimer (#15 of 20)

PDB-8gef:
CryoEM structure of beta-2-adrenergic receptor in complex with nucleotide-free Gs heterotrimer (#16 of 20)

PDB-8ggi:
Locally refined cryoEM structure of receptor from beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #1 of 20)

PDB-8ggj:
Locally refined cryoEM structure of receptor from beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #2 of 20)

PDB-8ggk:
Locally refined cryoEM structure of receptor from beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #3 of 20)

PDB-8ggl:
Locally refined cryoEM structure of receptor from beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #4 of 20)

PDB-8ggm:
Locally refined cryoEM structure of receptor from beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #5 of 20)

PDB-8ggn:
Locally refined cryoEM structure of receptor from beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #6 of 20)

PDB-8ggo:
Locally refined cryoEM structure of receptor from beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #7 of 20)

PDB-8ggp:
Locally refined cryoEM structure of receptor from beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #8 of 20)

PDB-8ggq:
Locally refined cryoEM structure of receptor from beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #9 of 20)

PDB-8ggr:
Locally refined cryoEM structure of receptor from beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #10 of 20)

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more