[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 113 items for (author: yip & a)

EMDB-37631:
Hepatitis B virus capsid (HBV core protein)
Method: single particle / : Yip RPH, Lai LTF, Lau WCY, Ngo JCK, Kwok DCY

EMDB-37634:
SR protein kinase 2 bound at 2-fold vertex of Hepatitis B virus capsid
Method: single particle / : Yip RPH, Lai LTF, Kwok DCY, Lau WCY, Ngo JCK

EMDB-38062:
Hepatitis B virus capsid in complex with SR protein kinase 2
Method: single particle / : Yip RPH, Lai LTF, Kwok DCY, Lau WCY, Ngo JCK

EMDB-40344:
Terminating ribosome with SRI-41315
Method: single particle / : Yip MCJ, Coelho JPL, Oltion K, Tauton J, Shao S

EMDB-40345:
terminating rabbit ribosome with SRI-41315 (focused on ABCE1)
Method: single particle / : Yip MCJ, Coelho JPL, Oltion K, Tauton J, Shao S

PDB-8scb:
Terminating ribosome with SRI-41315
Method: single particle / : Yip MCJ, Coelho JPL, Oltion K, Tauton J, Shao S

EMDB-17839:
Asymmetric unit of the yeast fatty acid synthase in the non-rotated state with ACP at the ketosreductase domain (FASamn sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

EMDB-17840:
Cryo-EM structure of the yeast fatty acid synthase at 1.9 angstrom resolution
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

EMDB-17842:
Asymmetric unit of the yeast fatty acid synthase in the non-rotated state with ACP at the ketosynthase domain (FASamn sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

EMDB-17843:
Asymmetric unit of the yeast fatty acid synthase with ACP at the enoyl reductase domain (FASam sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

EMDB-17846:
Asymmetric unit of the yeast fatty acid synthase in the semi non-rotated state with ACP at the enoyl reductase domain (FASam sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

EMDB-17847:
Asymmetric unit of the yeast fatty acid synthase in the non-rotated state with ACP at the ketosynthase domain (FASam sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

EMDB-17848:
Asymmetric unit of the yeast fatty acid synthase in the semi non-rotated state with ACP at the ketosynthase domain (FASam sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

EMDB-17851:
Asymmetric unit of the yeast fatty acid synthase in non-rotated state with ACP at the acetyl transferase domain (FASx sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

EMDB-17852:
Asymmetric unit of the yeast fatty acid synthase in the semi non-rotated state with ACP at the acetyl transferase domain (FASx sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

EMDB-17853:
Asymmetric unit of the yeast fatty acid synthase in the semi rotated state with ACP at the acetyl transferase domain (FASx sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

EMDB-17854:
Asymmetric unit of the yeast fatty acid synthase in the non-rotated state with ACP at the ketosynthase domain (FASx sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

EMDB-17855:
Asymmetric unit of the yeast fatty acid synthase in the semi non-rotated state with ACP at the ketosynthase domain (FASx sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

EMDB-17856:
Asymmetric unit of the yeast fatty acid synthase in the non-rotated state with ACP at the malonyl/palmitoyl transferase domain (FASx sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

EMDB-17859:
Asymmetric unit of the yeast fatty acid synthase in rotated state with ACP at the acetyl transferase domain (FASx sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

PDB-8prv:
Asymmetric unit of the yeast fatty acid synthase in the non-rotated state with ACP at the ketosreductase domain (FASamn sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

PDB-8prw:
Cryo-EM structure of the yeast fatty acid synthase at 1.9 angstrom resolution
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

PDB-8ps1:
Asymmetric unit of the yeast fatty acid synthase in the non-rotated state with ACP at the ketosynthase domain (FASamn sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

PDB-8ps2:
Asymmetric unit of the yeast fatty acid synthase with ACP at the enoyl reductase domain (FASam sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

PDB-8ps8:
Asymmetric unit of the yeast fatty acid synthase in the semi non-rotated state with ACP at the enoyl reductase domain (FASam sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

PDB-8ps9:
Asymmetric unit of the yeast fatty acid synthase in the non-rotated state with ACP at the ketosynthase domain (FASam sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

PDB-8psa:
Asymmetric unit of the yeast fatty acid synthase in the semi non-rotated state with ACP at the ketosynthase domain (FASam sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

PDB-8psf:
Asymmetric unit of the yeast fatty acid synthase in non-rotated state with ACP at the acetyl transferase domain (FASx sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

PDB-8psg:
Asymmetric unit of the yeast fatty acid synthase in the semi non-rotated state with ACP at the acetyl transferase domain (FASx sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

PDB-8psj:
Asymmetric unit of the yeast fatty acid synthase in the semi rotated state with ACP at the acetyl transferase domain (FASx sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

PDB-8psk:
Asymmetric unit of the yeast fatty acid synthase in the non-rotated state with ACP at the ketosynthase domain (FASx sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

PDB-8psl:
Asymmetric unit of the yeast fatty acid synthase in the semi non-rotated state with ACP at the ketosynthase domain (FASx sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

PDB-8psm:
Asymmetric unit of the yeast fatty acid synthase in the non-rotated state with ACP at the malonyl/palmitoyl transferase domain (FASx sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

PDB-8psp:
Asymmetric unit of the yeast fatty acid synthase in rotated state with ACP at the acetyl transferase domain (FASx sample)
Method: single particle / : Singh K, Bunzel G, Graf B, Yip KM, Stark H, Chari A

EMDB-27738:
Negative stain EM map of the heterodimeric p110gamma-p84 complex
Method: single particle / : Burke JE, Dalwadi U, Rathinaswamy MK, Yip CK, Nam SE

EMDB-27627:
Structure of p110 gamma bound to the Ras inhibitory nanobody NB7
Method: single particle / : Burke JE, Nam SE, Rathinaswamy MK, Yip CK

PDB-8dp0:
Structure of p110 gamma bound to the Ras inhibitory nanobody NB7
Method: single particle / : Burke JE, Nam SE, Rathinaswamy MK, Yip CK

EMDB-34195:
Human menin in complex with H3K79Me2 nucleosome
Method: single particle / : Lin J, Yu D, Lam WH, Dang S, Zhai Y, Li XD

PDB-8gpn:
Human menin in complex with H3K79Me2 nucleosome
Method: single particle / : Lin J, Yu D, Lam WH, Dang S, Zhai Y, Li XD

EMDB-26612:
Complex of UBE2O with NAP1L1 and ubiquitylated uL2
Method: single particle / : Yip MCJ, Sedor SF, Shao S

EMDB-26614:
Complex of UBE2O with NAP1L1
Method: single particle / : Yip MCJ, Sedor SF, Shao S

EMDB-26615:
Complex of UBE2O with NAP1L1 and ubiquitylated uL2 (focused on UBE2O-Ub)
Method: single particle / : Yip MCJ, Sedor SF, Shao S

PDB-7un3:
Complex of UBE2O with NAP1L1 and ubiquitylated uL2
Method: single particle / : Yip MCJ, Sedor SF, Shao S

PDB-7un6:
Complex of UBE2O with NAP1L1
Method: single particle / : Yip MCJ, Sedor SF, Shao S

EMDB-26792:
Transcription co-activator SAGA
Method: single particle / : Vasyliuk D, Yip CK

EMDB-26803:
Cryo-EM structure of the SAGA Tra1 module
Method: single particle / : Vasyliuk D, Yip CK

EMDB-26804:
Cryo-EM structure of the SAGA core module
Method: single particle / : Vasyliuk D, Yip CK

EMDB-26616:
SfSTING with c-di-GMP single fiber
Method: single particle / : Morehouse BR, Yip MCJ, Keszei AFA, McNamara-Bordewick NK, Shao S, Kranzusch PJ

EMDB-26617:
SfSTING with c-di-GMP double fiber
Method: single particle / : Morehouse BR, Yip MCJ, Keszei AFA, McNamara-Bordewick NK, Shao S, Kranzusch PJ

EMDB-26618:
SfSTING with cGAMP (masked)
Method: single particle / : Morehouse BR, Yip MCJ, Keszei AFA, McNamara-Bordewick NK, Shao S, Kranzusch PJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more