[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 27 items for (author: xiaojiang & s & chen)

EMDB-42144:
SARS-CoV-2 Nsp15, apo-form
Method: single particle / : Ito F, Yang H, Zhou ZH, Chen XS

EMDB-42145:
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, consensus form
Method: single particle / : Ito F, Yang H, Zhou ZH, Chen XS

EMDB-42146:
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, state 1
Method: single particle / : Ito F, Yang H, Zhou ZH, Chen XS

EMDB-42147:
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, state 2
Method: single particle / : Ito F, Yang H, Zhou ZH, Chen XS

PDB-8ud2:
SARS-CoV-2 Nsp15, apo-form
Method: single particle / : Ito F, Yang H, Zhou ZH, Chen XS

PDB-8ud3:
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, consensus form
Method: single particle / : Ito F, Yang H, Zhou ZH, Chen XS

PDB-8ud4:
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, state 1
Method: single particle / : Ito F, Yang H, Zhou ZH, Chen XS

PDB-8ud5:
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, state 2
Method: single particle / : Ito F, Yang H, Zhou ZH, Chen XS

EMDB-27875:
Full-length APOBEC3G in complex with HIV-1 Vif, CBF-beta, and fork RNA
Method: single particle / : Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS

EMDB-27885:
APOBEC3G in complex with HIV-1 Vif/CBF-beta/EloB/EloC/Cul5/Rbx2
Method: single particle / : Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS

EMDB-27887:
RNA-mediated APOBEC3G dimer
Method: single particle / : Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS

PDB-8e40:
Full-length APOBEC3G in complex with HIV-1 Vif, CBF-beta, and fork RNA
Method: single particle / : Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS

EMDB-33364:
Cryo-EM structure of a class T GPCR in apo state
Method: single particle / : Liu ZJ, Hua T, Xu WX, Wu LJ

EMDB-33365:
Cryo-EM structure of a class T GPCR in ligand-free state
Method: single particle / : Liu ZJ, Hua T, Xu WX, Wu LJ

EMDB-33366:
Cryo-EM structure of a class T GPCR in active state
Method: single particle / : Liu ZJ, Hua T, Xu WX, Wu LJ

PDB-7xp4:
Cryo-EM structure of a class T GPCR in apo state
Method: single particle / : Liu ZJ, Hua T, Xu WX, Wu LJ

PDB-7xp5:
Cryo-EM structure of a class T GPCR in ligand-free state
Method: single particle / : Liu ZJ, Hua T, Xu WX, Wu LJ

PDB-7xp6:
Cryo-EM structure of a class T GPCR in active state
Method: single particle / : Liu ZJ, Hua T, Xu WX, Wu LJ

EMDB-1681:
Parallel conformation of wild type double hexamer LTag
Method: single particle / : Cuesta I, Nunez-Ramirez R, Scheres SHW, Gai D, Chen XS, Fanning E, Carazo JM

EMDB-1682:
Displaced conformation of wild type double hexamer LTag
Method: single particle / : Cuesta I, Nunez-Ramirez R, Scheres SHW, Gai D, Chen XS, Fanning E, Carazo JM

EMDB-1683:
Helicase Domain hexamer from double hexamer LTag with protruding DNA
Method: single particle / : Cuesta I, Nunez-Ramirez R, Scheres SHW, Gai D, Chen XS, Fanning E, Carazo JM

EMDB-1684:
Helicase Domain hexamer from double hexamer LTag
Method: single particle / : Cuesta I, Nunez-Ramirez R, Scheres SHW, Gai D, Chen XS, Fanning E, Carazo JM

EMDB-1685:
Double hexamer of LTag108-627 mutant
Method: single particle / : Cuesta I, Nunez-Ramirez R, Scheres SHW, Gai D, Chen XS, Fanning E, Carazo JM

EMDB-1686:
AT helicase hexamer from Double hexamer of LTag108-627 mutant
Method: single particle / : Cuesta I, NunezRamirez R, Scheres SHW, Gai D, Chen XS, Fanning E, Carazo JM

EMDB-1687:
EP helicase hexamer from Double hexamer of LTag108-627 mutant
Method: single particle / : Cuesta I, Nunez-Ramirez R, Scheres SHW, Gai D, Chen XS, Fanning E, Carazo JM

EMDB-1134:
Polymorphism and double hexamer structure in the archaeal minichromosome maintenance (MCM) helicase from Methanobacterium thermoautotrophicum.
Method: single particle / : Gomez-Llorente Y, Fletcher RJ, Chen XS, Carazo JM, San Martin C

EMDB-1054:
Large T antigen on the simian virus 40 origin of replication: a 3D snapshot prior to DNA replication.
Method: single particle / : Gomez-Lorenzo MG, Valle M, Frank J, Gruss C, Sorzano COS, Chen XS, Donate L, Carazo JM

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more