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Showing all 41 items for (author: valle, & m.)
PDB-7zz6: 
Cryo-EM structure of "CT-CT dimer" of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
Method: single particle / : Lopez-Alonso JP, Lazaro M, Gil D, Choi PH, Tong L, Valle M
PDB-7zyy:
Cryo-EM structure of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
Method: single particle / : Lopez-Alonso JP, Lazaro M, Gil D, Choi PH, Tong L, Valle M
PDB-7zyz:
Cryo-EM structure of "CT oxa" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
Method: single particle / : Lopez-Alonso JP, Lazaro M, Gil D, Choi PH, Tong L, Valle M
PDB-7zz0:
Cryo-EM structure of "CT empty" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
Method: single particle / : Lopez-Alonso JP, Lazaro M, Gil D, Choi PH, Tong L, Valle M
PDB-7zz1:
Cryo-EM structure of "CT react" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
Method: single particle / : Lopez-Alonso JP, Lazaro M, Gil D, Choi PH, Tong L, Valle M
PDB-7zz2:
Cryo-EM structure of "CT pyr" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
Method: single particle / : Lopez-Alonso JP, Lazaro M, Gil D, Choi PH, Tong L, Valle M
PDB-7zz3:
Cryo-EM structure of "BC react" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
Method: single particle / : Lopez-Alonso JP, Lazaro M, Gil D, Choi PH, Tong L, Valle M
PDB-7zz4:
Cryo-EM structure of "BC closed" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
Method: single particle / : Lopez-Alonso JP, Lazaro M, Gil D, Choi PH, Tong L, Valle M
PDB-7zz5:
Cryo-EM structure of "BC open" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
Method: single particle / : Lopez-Alonso JP, Lazaro M, Gil D, Choi PH, Tong L, Valle M
PDB-7zz8:
Cryo-EM structure of Lactococcus lactis pyruvate carboxylase with acetyl-CoA and cyclic di-AMP
Method: single particle / : Lopez-Alonso JP, Lazaro M, Gil D, Choi PH, Tong L, Valle M
PDB-7nww:
CspA-27 cotranslational folding intermediate 1
Method: single particle / : Agirrezabala X, Samatova E, Macher M, Liutkute M, Gil-Carton D, Novacek J, Valle M, Rodnina MV
PDB-7oif:
CspA-27 cotranslational folding intermediate 2
Method: single particle / : Agirrezabala X, Samatova E, Macher M, Liutkute M, Gil-Carton D, Novacek J, Valle M, Rodnina MV
PDB-7oig:
CspA-27 cotranslational folding intermediate 3
Method: single particle / : Agirrezabala X, Samatova E, Macher M, Liutkute M, Gil-Carton D, Novacek J, Valle M, Rodnina MV
PDB-7oii:
CspA-70 cotranslational folding intermediate 2
Method: single particle / : Agirrezabala X, Samatova E, Macher M, Liutkute M, Gil-Carton D, Novacek J, Valle M, Rodnina MV
PDB-7ot5:
CspA-70 cotranslational folding intermediate 1
Method: single particle / : Agirrezabala X, Samatova E, Macher M, Liutkute M, Gil-Carton D, Novacek J, Valle M, Rodnina MV
PDB-7o19:
Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan
Method: single particle / : van der Stel AX, Gordon ER, Sengupta A, Martinez AK, Klepacki D, Perry TN, Herrero del Valle A, Vazquez-Laslop N, Sachs MS, Cruz-Vera LR, Innis CA
PDB-7o1a:
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Method: single particle / : van der Stel AX, Gordon ER, Sengupta A, Martinez AK, Klepacki D, Perry TN, Herrero del Valle A, Vazquez-Laslop N, Sachs MS, Cruz-Vera LR, Innis CA
PDB-7o1c:
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan
Method: single particle / : van der Stel AX, Gordon ER, Sengupta A, Martinez AK, Klepacki D, Perry TN, Herrero del Valle A, Vazquez-Laslop N, Sachs MS, Cruz-Vera LR, Innis CA
PDB-7a1d:
Cryo-EM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis (open conformation)
Method: single particle / : Lazaro M, Melero R, Huet C, Lopez-Alonso JP, Delgado S, Dodu A, Bruch EM, Abriata LA, Alzari PM, Valle M, Lisa MN
PDB-5odv:
Structure of Watermelon mosaic virus potyvirus.
Method: helical / : Zamora M, Mendez-Lopez E, Agirrezabala X, Cuesta R, Lavin JL, Sanchez-Pina MA, Aranda M, Valle M
PDB-5np6:
70S structure prior to bypassing
Method: single particle / : Agirrezabala X, Samatova E, Klimova M, Zamora M, Gil-Carton D, Rodnina M, Valle M
PDB-5fn1:
Electron cryo-microscopy of filamentous flexible virus PepMV (Pepino Mosaic Virus)
Method: single particle / : Agirrezabala X, Mendez-Lopez E, Lasso G, Sanchez-Pina MA, Aranda MA, Valle M
PDB-4v47:
Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome
Method: single particle / : Gao H, Sengupta J, Valle M, Korostelev A, Eswar N, Stagg SM, Van Roey P, Agrawal RK, Harvey ST, Sali A, Chapman MS, Frank J
PDB-4v48:
Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome
Method: single particle / : Gao H, Sengupta J, Valle M, Korostelev A, Eswar N, Stagg SM, Van Roey P, Agrawal RK, Harvey ST, Sali A, Chapman MS, Frank J
PDB-1zn0:
Coordinates of RRF and EF-G fitted into Cryo-EM map of the 50S subunit bound with both EF-G (GDPNP) and RRF
Method: single particle / : Gao N, Zavialov AV, Li W, Sengupta J, Valle M, Gursky RP, Ehrenberg M, Frank J
PDB-1zn1:
Coordinates of RRF fitted into Cryo-EM map of the 70S post-termination complex
Method: single particle / : Gao N, Zavialov AV, Li W, Sengupta J, Valle M, Gursky RP, Ehrenberg M, Frank J
PDB-1zc8:
Coordinates of tmRNA, SmpB, EF-Tu and h44 fitted into Cryo-EM map of the 70S ribosome and tmRNA complex
Method: single particle / : Valle M, Gillet R, Kaur S, Henne A, Ramakrishnan V, Frank J
PDB-1qza:
Coordinates of the A/T site tRNA model fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome
Method: single particle / : Valle M, Zavialov A, Li W, Stagg SM, Sengupta J, Nielsen RC, Nissen P, Harvey SC, Ehrenberg M, Frank J
PDB-1qzb:
Coordinates of the A-site tRNA model fitted into the cryo-EM map of 70S ribosome in the pre-translocational state
Method: single particle / : Valle M, Zavialov A, Li W, Stagg SM, Sengupta J, Nielsen RC, Nissen P, Harvey SC, Ehrenberg M, Frank J
PDB-1qzc:
Coordinates of S12, SH44, LH69 and SRL separately fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome
Method: single particle / : Valle M, Zavialov A, Li W, Stagg SM, Sengupta J, Nielsen RC, Nissen P, Harvey SC, Ehrenberg M, Frank J
PDB-1qzd:
EF-Tu.kirromycin coordinates fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome
Method: single particle / : Valle M, Zavialov A, Li W, Stagg SM, Sengupta J, Nielsen RC, Nissen P, Harvey SC, Ehrenberg M, Frank J
PDB-1r2w:
Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of the 70S ribosome
Method: single particle / : Valle M, Zavialov A, Li W, Stagg SM, Sengupta J, Nielsen RC, Nissen P, Harvey SC, Ehrenberg M, Frank J
PDB-1r2x:
Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome
Method: single particle / : Valle M, Zavialov A, Li W, Stagg SM, Sengupta J, Nielsen RC, Nissen P, Harvey SC, Ehrenberg M, Frank J
PDB-1pn6:
Domain-wise fitting of the crystal structure of T.thermophilus EF-G into the low resolution map of the release complex.Puromycin.EFG.GDPNP of E.coli 70S ribosome.
Method: single particle / : Valle M, Zavialov A, Sengupta J, Rawat U, Ehrenberg M, Frank J
PDB-1pn7:
Coordinates of S12, L11 proteins and P-tRNA, from the 70S X-ray structure aligned to the 70S Cryo-EM map of E.coli ribosome
Method: single particle / : Valle M, Zavialov A, Sengupta J, Rawat U, Ehrenberg M, Frank J
PDB-1pn8:
Coordinates of S12, L11 proteins and E-site tRNA from 70S crystal structure separately fitted into the Cryo-EM map of E.coli 70S.EF-G.GDPNP complex. The atomic coordinates originally from the E-site tRNA were fitted in the position of the hybrid P/E-site tRNA.
Method: single particle / : Valle M, Zavialov A, Sengupta J, Rawat U, Ehrenberg M, Frank J
PDB-1mvr:
Decoding Center & Peptidyl transferase center from the X-ray structure of the Thermus thermophilus 70S ribosome, aligned to the low resolution Cryo-EM map of E.coli 70S Ribosome
Method: single particle / : Rawat UB, Zavialov AV, Sengupta J, Valle M, Grassucci RA, Linde J, Vestergaard B, Ehrenberg M, Frank J
PDB-1mi6:
Docking of the modified RF2 X-ray structure into the Low Resolution Cryo-EM map of RF2 E.coli 70S Ribosome
Method: single particle / : Rawat UBS, Zavialov AV, Sengupta J, Valle M, Grassucci RA, Linde J, Vestergaard B, Ehrenberg M, Frank J
PDB-1ls2:
Fitting of EF-Tu and tRNA in the Low Resolution Cryo-EM Map of an EF-Tu Ternary Complex (GDP and Kirromycin) Bound to E. coli 70S Ribosome
Method: single particle / : Valle M, Sengupta J, Swami NK, Grassucci RA, Burkhardt N, Nierhaus KH, Agrawal RK, Frank J
PDB-1lu3:
Separate Fitting of the Anticodon Loop Region of tRNA (nucleotide 26-42) in the Low Resolution Cryo-EM Map of an EF-Tu Ternary Complex (GDP and Kirromycin) Bound to E. coli 70S Ribosome
Method: single particle / : Valle M, Sengupta J, Swami NK, Grassucci RA, Burkhardt N, Nierhaus KH, Agrawal RK, Frank J
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