[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 99 items for (author: tung & c)

EMDB-37631:
Hepatitis B virus capsid (HBV core protein)
Method: single particle / : Yip RPH, Lai LTF, Lau WCY, Ngo JCK, Kwok DCY

EMDB-37634:
SR protein kinase 2 bound at 2-fold vertex of Hepatitis B virus capsid
Method: single particle / : Yip RPH, Lai LTF, Kwok DCY, Lau WCY, Ngo JCK

EMDB-38062:
Hepatitis B virus capsid in complex with SR protein kinase 2
Method: single particle / : Yip RPH, Lai LTF, Kwok DCY, Lau WCY, Ngo JCK

EMDB-17705:
Structure of Chelator-GIDSR4 - Fbp1 - phospho-Ubc8~ubiquitin - class I
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17706:
Structure of Chelator-GIDSR4 - Fbp1 - phospho-Ubc8~ubiquitin - class II
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17707:
Chelator-GIDSR4 - Fbp1 - phospho-Ubc8~ubiquitin - class III
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17709:
Structure of Chelator-GIDSR4 - Fbp1 - phospho-Ubc8~ubiquitin - class V
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17710:
Structure of Chelator-GIDSR4 - Fbp1 - phospho-Ubc8~ubiquitin - class IV
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17713:
Catalytic module of human CTLH E3 ligase bound to multiphosphorylated UBE2H~ubiquitin
Method: single particle / : Chrustowicz J, Sherpa D, Prabu RJ, Schulman BA

EMDB-17715:
SRS and Cat modules of human CTLHSR4 bound to multiphosphorylated UBE2H~ubiquitin
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17716:
Structure of CTLHSR4 - phospho-UBE2H~ubiquitin bound to engineered VH
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17717:
SRS and Cat modules of yeast Chelator-GIDSR4 bound to multiphosphorylated Ubc8~ubiquitin
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17764:
Catalytic module of yeast GID E3 ligase bound to multiphosphorylated Ubc8~ubiquitin
Method: single particle / : Chrustowicz J, Sherpa D, Prabu RJ, Schulman BA

PDB-8pjn:
Catalytic module of human CTLH E3 ligase bound to multiphosphorylated UBE2H~ubiquitin
Method: single particle / : Chrustowicz J, Sherpa D, Prabu RJ, Schulman BA

PDB-8pmq:
Catalytic module of yeast GID E3 ligase bound to multiphosphorylated Ubc8~ubiquitin
Method: single particle / : Chrustowicz J, Sherpa D, Prabu RJ, Schulman BA

EMDB-16355:
Structure of Dimeric HECT E3 Ubiquitin Ligase UBR5
Method: single particle / : Hehl LA, Prabu JR, Schulman BA

EMDB-16356:
Structure of HECT E3 UBR5 forming K48 linked Ubiquitin chains
Method: single particle / : Hehl LA, Prabu JR, Schulman BA

EMDB-16865:
Tetrameric HECT E3 Ubiquitin Ligase UBR5
Method: single particle / : Hehl LA, Prabu JR, Schulman BA

EMDB-16866:
Cryo-EM map of ubiquitin-VME bound HECT E3 ligase UBR5
Method: single particle / : Hehl LA, Horn-Ghetko D, Prabu JR, Schulman BA

EMDB-16867:
Ubiquitin transfer from E2 to E3: UBE2D2-ubiquitin linked to HECT E3 ligase UBR5
Method: single particle / : Hehl LA, Horn-Ghetko D, Prabu JR, Schulman BA

EMDB-17466:
Cryo-EM map of HECT E3 ligase UBR5 forming K48 linked ubiquitin chains
Method: single particle / : Hehl LA, Prabu JR, Schulman BA

PDB-8c06:
Structure of Dimeric HECT E3 Ubiquitin Ligase UBR5
Method: single particle / : Hehl LA, Prabu JR, Schulman BA

PDB-8c07:
Structure of HECT E3 UBR5 forming K48 linked Ubiquitin chains
Method: single particle / : Hehl LA, Prabu JR, Schulman BA

EMDB-27148:
Zebrafish MFSD2A isoform B in inward open ligand bound conformation
Method: single particle / : Nguyen C, Lei HT, Lai LTF, Gallentino MJ, Mu X, Matthies D, Gonen T

EMDB-27149:
Zebrafish MFSD2A isoform B in inward open ligand-free conformation
Method: single particle / : Nguyen C, Lei HT, Lai LTF, Gallentino MJ, Mu X, Matthies D, Gonen T

EMDB-27150:
Zebrafish MFSD2A isoform B in inward open ligand 1A conformation
Method: single particle / : Nguyen C, Lei HT, Lai LTF, Gallentino MJ, Mu X, Matthies D, Gonen T

EMDB-27151:
Zebrafish MFSD2A isoform B in inward open ligand 1B conformation
Method: single particle / : Nguyen C, Lei HT, Lai LTF, Gallentino MJ, Mu X, Matthies D, Gonen T

EMDB-27152:
Zebrafish MFSD2A isoform B in inward open ligand 2B conformation
Method: single particle / : Nguyen C, Lei HT, Lai LTF, Gallentino MJ, Mu X, Matthies D, Gonen T

EMDB-27153:
Zebrafish MFSD2A isoform B in inward open ligand 3C conformation
Method: single particle / : Nguyen C, Lei HT, Lai LTF, Gallentino MJ, Mu X, Matthies D, Gonen T

PDB-8d2s:
Zebrafish MFSD2A isoform B in inward open ligand bound conformation
Method: single particle / : Nguyen C, Lei HT, Lai LTF, Gallentino MJ, Mu X, Matthies D, Gonen T

PDB-8d2t:
Zebrafish MFSD2A isoform B in inward open ligand-free conformation
Method: single particle / : Nguyen C, Lei HT, Lai LTF, Gallentino MJ, Mu X, Matthies D, Gonen T

PDB-8d2u:
Zebrafish MFSD2A isoform B in inward open ligand 1A conformation
Method: single particle / : Nguyen C, Lei HT, Lai LTF, Gallentino MJ, Mu X, Matthies D, Gonen T

PDB-8d2v:
Zebrafish MFSD2A isoform B in inward open ligand 1B conformation
Method: single particle / : Nguyen C, Lei HT, Lai LTF, Gallentino MJ, Mu X, Matthies D, Gonen T

PDB-8d2w:
Zebrafish MFSD2A isoform B in inward open ligand 2B conformation
Method: single particle / : Nguyen C, Lei HT, Lai LTF, Gallentino MJ, Mu X, Matthies D, Gonen T

PDB-8d2x:
Zebrafish MFSD2A isoform B in inward open ligand 3C conformation
Method: single particle / : Nguyen C, Lei HT, Lai LTF, Gallentino MJ, Mu X, Matthies D, Gonen T

EMDB-34648:
CryoEM structure of Helicobacter pylori UreFD/urease complex
Method: single particle / : Nim YS, Fong IYH, Deme J, Tsang KL, Caesar J, Johnson S, Wong KB, Lea SM

EMDB-34659:
CryoEM Structure of Klebsiella pneumoniae UreD/urease complex
Method: single particle / : Nim YS, Fong IYH, Deme J, Tsang KL, Caesar J, Johnson S, Wong KB, Lea SM

PDB-8hc1:
CryoEM structure of Helicobacter pylori UreFD/urease complex
Method: single particle / : Nim YS, Fong IYH, Deme J, Tsang KL, Caesar J, Johnson S, Wong KB, Lea SM

PDB-8hcn:
CryoEM Structure of Klebsiella pneumoniae UreD/urease complex
Method: single particle / : Nim YS, Fong IYH, Deme J, Tsang KL, Caesar J, Johnson S, Wong KB, Lea SM

EMDB-14323:
Structure of Chelator-GIDSR4 bound to Mdh2
Method: single particle / : Sherpa D, Chrustowicz J, Schulman B

EMDB-14324:
Structure of Cage-GIDSR4 bound to PHSVTP-Fbp1
Method: single particle / : Chrustowicz J, Sherpa D, Qiao S, Schulman B

EMDB-14338:
Structure of endogenous Cage-GIDAnt complex
Method: single particle / : Sherpa D, Chrustowicz J, Qiao S, Schulman B

EMDB-32830:
GID subcomplex: Gid12 bound Substrate Receptor Scaffolding module
Method: single particle / : Qiao S, Cheng JD, Schulman BA

EMDB-32831:
Gid12 bound GIDSR4 E3 ubiquitin ligase complex
Method: single particle / : Qiao S, Cheng DJ, Schulman BA

EMDB-32833:
Gid12 bound Chelator-GIDSR4
Method: single particle / : Qiao S, Cheng DJ, Schulman BA

EMDB-32834:
Cage assembly GID E3 ubiquitin ligase
Method: single particle / : Qiao S, Cheng DJ, Schulman BA

EMDB-32835:
Gid12 bound Cage-GIDSR3
Method: single particle / : Qiao S, Cheng DJ, Schulman BA

PDB-7wug:
GID subcomplex: Gid12 bound Substrate Receptor Scaffolding module
Method: single particle / : Qiao S, Cheng JD, Schulman BA

EMDB-30262:
DXPS
Method: single particle / : Lau WCY

PDB-7bzx:
DXPS
Method: single particle / : Lau WCY

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more