[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 119 items for (author: tano & y)

EMDB-15698:
Cryo-EM structure of Cas12k-sgRNA binary complex (type V-K CRISPR-associated transposon)
Method: single particle / : Tenjo-Castano F, Sofos N, Stella S, Molina R, Pape T, Lopez-Mendez B, Stutzke LS, Temperini P, Montoya G

PDB-8axb:
Cryo-EM structure of Cas12k-sgRNA binary complex (type V-K CRISPR-associated transposon)
Method: single particle / : Tenjo-Castano F, Sofos N, Stella S, Molina R, Pape T, Lopez-Mendez B, Stutzke LS, Temperini P, Montoya G

EMDB-15697:
Cryo-EM structure of shCas12k-sgRNA-dsDNA ternary complex (type V-K CRISPR-associated transposon)
Method: single particle / : Tenjo-Castano F, Sofos N, Stella S, Fuglsang A, Pape T, Mesa P, Stutzke LS, Temperini P, Montoya G

PDB-8axa:
Cryo-EM structure of shCas12k-sgRNA-dsDNA ternary complex (type V-K CRISPR-associated transposon)
Method: single particle / : Tenjo-Castano F, Sofos N, Stella S, Fuglsang A, Pape T, Mesa P, Stutzke LS, Temperini P, Montoya G

EMDB-29607:
HIV-2 Gag Capsid from Immature Virus-like Particles
Method: single particle / : Talledge N, Zhang W, Mansky LM

EMDB-28375:
Structure of the human L-type voltage-gated calcium channel Cav1.2 complexed with L-leucine (CABAD Map 2)
Method: single particle / : Chen Z, Mondal A, Abderemane-Ali F, Minor DL

EMDB-28376:
Structure of a human EMC:human Cav1.2 channel complex in GDN detergent (ECAB Map 3)
Method: single particle / : Chen Z, Mondal A, Abderemane-Ali F, Minor DL

EMDB-28561:
Human L-type voltage-gated calcium channel Cav1.2 complexed with L-leucine (Segment Map 01)
Method: single particle / : Chen Z, Mondal A, Abderemane-Ali F, Minor DL

EMDB-28564:
Human L-type voltage-gated calcium channel Cav1.2 complexed with L-leucine (Segment Map 02)
Method: single particle / : Chen Z, Mondal A, Abderemane-Ali F, Minor DL

EMDB-28578:
Human EMC:human Cav1.2 channel complex (Segment map 01)
Method: single particle / : Chen Z, Mondal A, Abderemane-Ali F, Minor DL

EMDB-28579:
Human EMC:human Cav1.2 channel complex in GDN detergent (Segment map 02)
Method: single particle / : Chen Z, Mondal A, Abderemane-Ali F, Minor DL

EMDB-40559:
Human EMC:human Cav1.2 channel complex in GDN detergent (ECAB Map 1, Consensus Map)
Method: single particle / : Chen Z, Mondal A, Abderemane-Ali F, Minor DL

EMDB-40560:
Human EMC:human Cav1.2 channel complex in GDN detergent (ECAB Map 2, Consensus Map)
Method: single particle / : Chen Z, Mondal A, Abderemane-Ali F, Minor DL

EMDB-40561:
Human L-type voltage-gated calcium channel Cav1.2 (CABAD Map 1, Consensus Map)
Method: single particle / : Chen Z, Mondal A, Abderemane-Ali F, Minor DL

EMDB-29606:
CryoET of HIV-2 Immature Particles
Method: electron tomography / : Talledge N, Zhang W, Mansky ML

EMDB-15116:
Structural insights into the binding of bS1 to the ribosome
Method: single particle / : D'Urso G, Chat S, Gillet R, Giudice E

PDB-8a3l:
Structural insights into the binding of bS1 to the ribosome
Method: single particle / : D'Urso G, Chat S, Gillet R, Giudice E

EMDB-27548:
Cryo-EM structure of skeletal muscle alpha-actin
Method: helical / : Arora AS, Huang HL, Heissler SM, Chinthalapudi K

EMDB-27549:
Cryo-EM structure of cardiac muscle alpha-actin
Method: single particle / : Arora AS, Huang HL, Heissler SM, Chinthalapudi K

EMDB-27565:
Cryo-EM structure of nonmuscle gamma-actin
Method: single particle / : Arora AS, Huang HL, Heissler SM, Chinthalapudi K

EMDB-27572:
Cryo-EM structure of nonmuscle beta-actin
Method: single particle / : Arora AS, Huang HL, Heissler SM, Chinthalapudi K

PDB-8dmx:
Cryo-EM structure of skeletal muscle alpha-actin
Method: helical / : Arora AS, Huang HL, Heissler SM, Chinthalapudi K

PDB-8dmy:
Cryo-EM structure of cardiac muscle alpha-actin
Method: single particle / : Arora AS, Huang HL, Heissler SM, Chinthalapudi K

PDB-8dnf:
Cryo-EM structure of nonmuscle gamma-actin
Method: single particle / : Arora AS, Huang HL, Heissler SM, Chinthalapudi K

PDB-8dnh:
Cryo-EM structure of nonmuscle beta-actin
Method: single particle / : Arora AS, Huang HL, Heissler SM, Chinthalapudi K

EMDB-35399:
Structure of human alpha-2/delta-1 with mirogabalin
Method: single particle / : Kozai D, Numoto N, Fujiyoshi Y

EMDB-35400:
Structure of human alpha-2/delta-1 without mirogabalin
Method: single particle / : Kozai D, Numoto N, Fujiyoshi Y

PDB-8if3:
Structure of human alpha-2/delta-1 with mirogabalin
Method: single particle / : Kozai D, Numoto N, Fujiyoshi Y

PDB-8if4:
Structure of human alpha-2/delta-1 without mirogabalin
Method: single particle / : Kozai D, Numoto N, Fujiyoshi Y

EMDB-16183:
In situ structure of the Caulobacter crescentus S-layer
Method: subtomogram averaging / : von Kuegelgen A, Bharat T

EMDB-16207:
HIV-1 CA-SP1 subtomogram average with Relion4 from EMPIAR-10164 dataset, 3.2 A from 5 tomograms
Method: subtomogram averaging / : Ke Z, Briggs JAG, Scheres SHW

EMDB-16209:
HIV-1 CA-SP1 subtomogram average with Relion4 from EMPIAR-10164 dataset, 3.0 A from the full dataset
Method: subtomogram averaging / : Ke Z, Briggs JAG, Scheres SHW

EMDB-26840:
Focused refinement of the Raptor-TFEB-Rag-Ragulator complex with Raptor mask
Method: single particle / : Cui Z, Hurley J

EMDB-26842:
Focused refinement of the Raptor-TFEB-Rag-Ragulator complex with c-Rag-Ragulator mask
Method: single particle / : Cui Z, Hurley J

EMDB-26843:
Focused refinement of the Raptor-TFEB-Rag-Ragulator complex with TFEB-nc-Rag-Ragulator mask
Method: single particle / : Cui Z, Hurley J

EMDB-26844:
Homogeneous refinement of the Raptor-TFEB-Rag-Ragulator complex
Method: single particle / : Cui Z, Hurley J

EMDB-26846:
Composite cryo-EM map of the Raptor-TFEB-Rag-Ragulator complex
Method: single particle / : Cui Z, Hurley J

EMDB-26852:
Cryo-EM structure of the mTORC1-TFEB-Rag-Ragulator complex with C2 symmetry
Method: single particle / : Cui Z, Hurley J

EMDB-26857:
cryo-EM structure of the mTORC1-TFEB-Rag-Ragulator complex with symmetry expansion
Method: single particle / : Cui Z, Hurley J

EMDB-26861:
A composite cryo-EM map of the mTORC1-TFEB-Rag-Ragulator complex
Method: single particle / : Cui Z, Hurley J

PDB-7ux2:
cryo-EM structure of the Raptor-TFEB-Rag-Ragulator complex
Method: single particle / : Cui Z, Hurley J

PDB-7uxc:
cryo-EM structure of the mTORC1-TFEB-Rag-Ragulator complex with symmetry expansion
Method: single particle / : Cui Z, Hurley J

PDB-7uxh:
cryo-EM structure of the mTORC1-TFEB-Rag-Ragulator complex
Method: single particle / : Cui Z, Hurley J

EMDB-15949:
COPII inner coat reprocessed with relion4.0
Method: subtomogram averaging / : Zanetti G, Pyle E

EMDB-15294:
Cryo-EM structure of the strand transfer complex of the TnsB transposase (type V-K CRISPR-associated transposon)
Method: single particle / : Tenjo-Castano F, Sofos N, Lopez-Mendez B, Stutzke LS, Fuglsang A, Stella S, Montoya G

EMDB-15344:
Type V-K CAST TnsB bound to LTR-SR
Method: single particle / : Tenjo-Castano F, Sofos N, Lopez-Mendez B, Stutzke LS, Fuglsang A, Stella S, Montoya G

PDB-8aa5:
Cryo-EM structure of the strand transfer complex of the TnsB transposase (type V-K CRISPR-associated transposon)
Method: single particle / : Tenjo-Castano F, Sofos N, Lopez-Mendez B, Stutzke LS, Fuglsang A, Stella S, Montoya G

EMDB-32381:
Trichodesmium erythraeum cyanophycin synthetase 1 (TeCphA1)
Method: single particle / : Kawasaki M, Miyakawa T, Yang J, Adachi N, Fujii A, Miyauchi Y, Muramatsu T, Moriya T, Senda T, Tanokura M

EMDB-32382:
Trichodesmium erythraeum cyanophycin synthetase 1 (TeCphA1) with ATPgammaS
Method: single particle / : Kawasaki M, Miyakawa T, Yang J, Adachi N, Fujii A, Miyauchi Y, Muramatsu T, Moriya T, Senda T, Tanokura M

EMDB-32383:
Trichodesmium erythraeum cyanophycin synthetase 1 (TeCphA1) with ATPgammaS, 4x(beta-Asp-Arg), and aspartate
Method: single particle / : Miyakawa T, Yang J, Kawasaki M, Adachi N, Fujii A, Miyauchi Y, Muramatsu T, Moriya T, Senda T, Tanokura M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more