[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 45 items for (author: steffen & am)

EMDB-12324:
In situ cryo-electron tomogram of the Synechocystis wild-type VIPP1 strain grown in high light
Method: electron tomography / : Wietrzynski W, Klumpe S, Heinz S, Spaniol B, Schaffer M, Rast A, Nickelsen J, Schroda M, Engel BD

EMDB-12325:
In situ cryo-electron tomogram of the Synechocystis F4E VIPP1 mutant grown in high light
Method: electron tomography / : Wietrzynski W, Klumpe S, Heinz S, Spaniol B, Schaffer M, Rast A, Nickelsen J, Schroda M, Engel BD

EMDB-12326:
In situ cryo-electron tomogram of the Synechocystis V11E VIPP1 mutant grown in high light
Method: electron tomography / : Wietrzynski W, Klumpe S, Heinz S, Spaniol B, Schaffer M, Rast A, Nickelsen J, Schroda M, Engel BD

EMDB-12327:
In situ cryo-electron tomogram of a cluster of VIPP1-mCherry structures inside the Chlamydomonas chloroplast
Method: electron tomography / : Wietrzynski W, Klumpe S, Heinz S, Spaniol B, Schaffer M, Rast A, Nickelsen J, Schroda M, Engel BD

EMDB-12328:
In situ cryo-electron tomogram of a cluster of VIPP1-mCherry structures inside the Chlamydomonas chloroplast
Method: electron tomography / : Wietrzynski W, Klumpe S, Heinz S, Spaniol B, Schaffer M, Rast A, Nickelsen J, Schroda M, Engel BD

EMDB-12329:
In situ cryo-electron tomogram of a cluster of VIPP1-mCherry structures inside the Chlamydomonas chloroplast
Method: electron tomography / : Wietrzynski W, Klumpe S, Heinz S, Spaniol B, Schaffer M, Rast A, Nickelsen J, Schroda M, Engel BD

EMDB-12330:
In situ cryo-electron tomogram of a cluster of VIPP1-mCherry structures inside the Chlamydomonas chloroplast
Method: electron tomography / : Wietrzynski W, Klumpe S, Heinz S, Spaniol B, Schaffer M, Rast A, Nickelsen J, Schroda M, Engel BD

EMDB-12710:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Method: single particle / : Gupta TK, Klumpe S, Gries K, Strauss M, Rudack T, Schuller JM, Schroda M, Engel BD

EMDB-12711:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Method: single particle / : Gupta TK, Klumpe S, Gries K, Strauss M, Rudack T, Schuller JM, Schroda M, Engel BD

EMDB-12712:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Method: single particle / : Gupta TK, Klumpe S, Gries K, Strauss M, Rudack T, Schuller JM, Schroda M, Engel BD

EMDB-12713:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Method: single particle / : Gupta TK, Klumpe S, Gries K, Strauss M, Rudack T, Schuller JM, Schroda M, Engel BD

EMDB-12714:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Method: single particle / : Gupta TK, Klumpe S, Gries K, Strauss M, Rudack T, Schuller JM, Schroda M, Engel BD

PDB-7o3w:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Method: single particle / : Gupta TK, Klumpe S, Gries K, Strauss M, Rudack T, Schuller JM, Schroda M, Engel BD

PDB-7o3x:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Method: single particle / : Gupta TK, Klumpe S, Gries K, Strauss M, Rudack T, Schuller JM, Schroda M, Engel BD

PDB-7o3y:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Method: single particle / : Gupta TK, Klumpe S, Gries K, Strauss M, Rudack T, Schuller JM, Schroda M, Engel BD

PDB-7o3z:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Method: single particle / : Gupta TK, Klumpe S, Gries K, Strauss M, Rudack T, Schuller JM, Schroda M, Engel BD

PDB-7o40:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Method: single particle / : Gupta TK, Klumpe S, Gries K, Strauss M, Rudack T, Schuller JM, Schroda M, Engel BD

EMDB-11978:
Nanobody E bound to Spike-RBD in a localized reconstruction
Method: single particle / : Hallberg BM, Das H

EMDB-11981:
SARS-CoV-spike bound to two neutralising nanobodies
Method: single particle / : Hallberg BM, Das H

PDB-7b14:
Nanobody E bound to Spike-RBD in a localized reconstruction
Method: single particle / : Hallberg BM, Das H

PDB-7b18:
SARS-CoV-spike bound to two neutralising nanobodies
Method: single particle / : Hallberg BM, Das H

EMDB-11980:
SARS-CoV-spike RBD bound to two neutralising nanobodies.
Method: single particle / : Hallberg BM, Das H

PDB-7b17:
SARS-CoV-spike RBD bound to two neutralising nanobodies.
Method: single particle / : Hallberg BM, Das H

EMDB-23018:
SARS-CoV-2 spike in complex with nanobodies E
Method: single particle / : Hallberg BM, Das H

PDB-7ksg:
SARS-CoV-2 spike in complex with nanobodies E
Method: single particle / : Hallberg BM, Das H

EMDB-21992:
GLP-1 peptide hormone bound to Glucagon-Like peptide-1 (GLP-1) Receptor
Method: single particle / : Belousoff MJ, Zhang X, Danev R

EMDB-21993:
Non peptide agonist CHU-128, bound to Glucagon-Like peptide-1 (GLP-1) Receptor
Method: single particle / : Belousoff MJ, Zhang X, Danev R

EMDB-21994:
Non peptide agonist PF-06882961, bound to Glucagon-Like peptide-1 (GLP-1) Receptor
Method: single particle / : Belousoff MJ, Zhang X, Danev R

PDB-6x18:
GLP-1 peptide hormone bound to Glucagon-Like peptide-1 (GLP-1) Receptor
Method: single particle / : Belousoff MJ, Zhang X, Danev R

PDB-6x19:
Non peptide agonist CHU-128, bound to Glucagon-Like peptide-1 (GLP-1) Receptor
Method: single particle / : Belousoff MJ, Zhang X, Danev R

PDB-6x1a:
Non peptide agonist PF-06882961, bound to Glucagon-Like peptide-1 (GLP-1) Receptor
Method: single particle / : Belousoff MJ, Zhang X, Danev R

EMDB-7875:
BG505 MD39 SOSIP trimer in complex with mature BG18 fragment antigen binding
Method: single particle / : Ozorowski G, Steichen JM, Schief WR, Ward AB

EMDB-7876:
BG505 MD64 N332-GT2 SOSIP trimer in complex with germline-reverted BG18 fragment antigen binding
Method: single particle / : Ozorowski G, Steichen JM, Schief WR, Ward AB

EMDB-7884:
BG505 MD64 N332-GT5 SOSIP trimer in complex with BG18-like precursor HMP1 fragment antigen binding and base-binding RM20A3 fragment antigen binding
Method: single particle / : Torres JL, Ozorowski G, Steichen JM, Schief WR, Ward AB

EMDB-7885:
BG505 MD64 N332-GT5 SOSIP trimer in complex with BG18-like precursor HMP42 fragment antigen binding and base-binding RM20A3 fragment antigen binding
Method: single particle / : Torres JL, Ozorowski G, Steichen JM, Schief WR, Ward AB

PDB-6dfg:
BG505 MD39 SOSIP trimer in complex with mature BG18 fragment antigen binding
Method: single particle / : Ozorowski G, Steichen JM, Schief WR, Ward AB

PDB-6dfh:
BG505 MD64 N332-GT2 SOSIP trimer in complex with germline-reverted BG18 fragment antigen binding
Method: single particle / : Ozorowski G, Steichen JM, Schief WR, Ward AB

PDB-6nf5:
BG505 MD64 N332-GT5 SOSIP trimer in complex with BG18-like precursor HMP1 fragmentantigen binding and base-binding RM20A3 fragment antigen binding
Method: single particle / : Ozorowski G, Torres JL, Steichen JM, Schief WR, Ward AB

PDB-6nfc:
BG505 MD64 N332-GT5 SOSIP trimer in complex with BG18-like precursor HMP42 fragmentantigen binding and base-binding RM20A3 fragment antigen binding
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-4728:
Cryo-EM structure of a poly(A) RNP bound to the Pan2-Pan3 deadenylase
Method: single particle / : Schaefer IB, Conti E

PDB-6r5k:
Cryo-EM structure of a poly(A) RNP bound to the Pan2-Pan3 deadenylase
Method: single particle / : Schaefer IB, Conti E

EMDB-9029:
Hemagglutinin trimeric ectodomain (B/Massachusetts/02/2012) in complex with Fab from IgG CR9114 and single-domain antibody SD84
Method: single particle / : Pallesen J, Nieusma T, Hoffman RMB, Ward AB

EMDB-6533:
Electron cryo-microscopy of human TAP transporter inhibited by the ICP47 viral inhibitor from herpes simplex virus type 1
Method: single particle / : Oldham ML, Hite RK, Steffen AM, Damko E, Li Z, Walz T, Chen J

EMDB-6357:
Negative stain (RCT) surface of full-length glucagon receptor FAB complex
Method: single particle / : Yang L, Yang D, de Graaf C, Moeller A, West GM, Dharmarajan V, Wang C, Siu FY, Song G, Reedtz-Runge S, Pascal BD, Wu B, Potter CS, Zhou H, Griffin PR, Carragher B, Yang H, Wang MW, Stevens RC, Jiang H

EMDB-6358:
Negative stain (RCT) surface of full-length glucagon receptor FAB complex
Method: single particle / : Yang L, Yang D, de Graaf C, Moeller A, West GM, Dharmarajan V, Wang C, Siu FY, Song G, Reedtz-Runge S, Pascal BD, Wu B, Potter CS, Zhou H, Griffin PR, Carragher B, Yang H, Wang MW, Stevens RC, Jiang H

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more