[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,734 items for (author: song & l)


EMDB entry, No image

EMDB-37240:
SARS-CoV-2 Omicron spike in complex with 5817 Fab
Method: single particle / : Cao L, Wang X


EMDB entry, No image

EMDB-37241:
The interface structure of Omicron RBD binding to 5817 Fab
Method: single particle / : Cao L, Wang X

PDB-8khc:
SARS-CoV-2 Omicron spike in complex with 5817 Fab
Method: single particle / : Cao L, Wang X

PDB-8khd:
The interface structure of Omicron RBD binding to 5817 Fab
Method: single particle / : Cao L, Wang X

EMDB-37919:
Cryo-EM structure of DSR2 apo complex
Method: single particle / : Zhang JT, Jia N, Liu XY

EMDB-37920:
Cryo-EM structure of DSR2 apo (partial) complex
Method: single particle / : Zhang JT, Jia N, Liu XY

EMDB-37921:
Cryo-EM structure of DSR2-tube complex
Method: single particle / : Zhang JT, Jia N, Liu XY

EMDB-37922:
Cryo-EM structure of DSR2 (H171A)-tube-NAD+ complex
Method: single particle / : Zhang JT, Jia N, Liu XY

EMDB-37923:
Cryo-EM structure of DSR2 (H171A)-tube-NAD+ (partial) complex
Method: single particle / : Zhang JT, Jia N, Liu XY

EMDB-37924:
Cryo-EM structure of DSR2-DSAD1 complex
Method: single particle / : Zhang JT, Jia N, Liu XY

EMDB-37925:
Cryo-EM structure of DSR2-DSAD1 (partial) complex
Method: single particle / : Zhang JT, Jia N, Liu XY

EMDB-37926:
Cryo-EM structure of DSR2-DSAD1-NAD+ (partial) complex
Method: single particle / : Zhang JT, Jia N, Liu XY

PDB-8wy8:
Cryo-EM structure of DSR2 apo complex
Method: single particle / : Zhang JT, Jia N, Liu XY

PDB-8wy9:
Cryo-EM structure of DSR2 apo (partial) complex
Method: single particle / : Zhang JT, Jia N, Liu XY

PDB-8wya:
Cryo-EM structure of DSR2-tube complex
Method: single particle / : Zhang JT, Jia N, Liu XY

PDB-8wyb:
Cryo-EM structure of DSR2 (H171A)-tube-NAD+ complex
Method: single particle / : Zhang JT, Jia N, Liu XY

PDB-8wyc:
Cryo-EM structure of DSR2 (H171A)-tube-NAD+ (partial) complex
Method: single particle / : Zhang JT, Jia N, Liu XY

PDB-8wyd:
Cryo-EM structure of DSR2-DSAD1 complex
Method: single particle / : Zhang JT, Jia N, Liu XY

PDB-8wye:
Cryo-EM structure of DSR2-DSAD1 (partial) complex
Method: single particle / : Zhang JT, Jia N, Liu XY

PDB-8wyf:
Cryo-EM structure of DSR2-DSAD1-NAD+ (partial) complex
Method: single particle / : Zhang JT, Jia N, Liu XY

EMDB-38691:
Thiamine-bound human SLC19A3
Method: single particle / : Dang Y, Wang GP, Zhang Z

EMDB-38692:
Pyridoxamine-bound human SLC19A3
Method: single particle / : Dang Y, Wang GP, Zhang Z

EMDB-38693:
Fedratinib-bound human SLC19A3
Method: single particle / : Dang Y, Wang GP, Zhang Z

PDB-8xv2:
Thiamine-bound human SLC19A3
Method: single particle / : Dang Y, Wang GP, Zhang Z

PDB-8xv5:
Pyridoxamine-bound human SLC19A3
Method: single particle / : Dang Y, Wang GP, Zhang Z

PDB-8xv9:
Fedratinib-bound human SLC19A3
Method: single particle / : Dang Y, Wang GP, Zhang Z

EMDB-37695:
Cryo-EM structure of human SIDT1 protein with C1 symmetry at neutral pH
Method: single particle / : Liu W, Tang M, Wang J, Zhang X, Wu S, Ru H

EMDB-37696:
Cryo-EM structure of human SIDT1 protein with C2 symmetry at neutral pH
Method: single particle / : Liu W, Tang M, Wang J, Zhang X, Wu S, Ru H

EMDB-37697:
Cryo-EM structure of human SIDT1 protein with C1 symmetry at low pH
Method: single particle / : Liu W, Tang M, Wang J, Zhang X, Wu S, Ru H

EMDB-37698:
Cryo-EM structure of human SIDT1 protein with C2 symmetry at low pH
Method: single particle / : Liu W, Tang M, Wang J, Zhang X, Wu S, Ru H

PDB-8woq:
Cryo-EM structure of human SIDT1 protein with C1 symmetry at neutral pH
Method: single particle / : Liu W, Tang M, Wang J, Zhang X, Wu S, Ru H

PDB-8wor:
Cryo-EM structure of human SIDT1 protein with C2 symmetry at neutral pH
Method: single particle / : Liu W, Tang M, Wang J, Zhang X, Wu S, Ru H

PDB-8wos:
Cryo-EM structure of human SIDT1 protein with C1 symmetry at low pH
Method: single particle / : Liu W, Tang M, Wang J, Zhang X, Wu S, Ru H

PDB-8wot:
Cryo-EM structure of human SIDT1 protein with C2 symmetry at low pH
Method: single particle / : Liu W, Tang M, Wang J, Zhang X, Wu S, Ru H

EMDB-36678:
PSI-AcpPCI supercomplex from Amphidinium carterae
Method: single particle / : Li ZH, Li XY, Wang WD

EMDB-36742:
PSI-AcpPCI supercomplex from Symbiodinium
Method: single particle / : Li ZH, Li XY, Wang WD

EMDB-36743:
PSI-AcpPCI supercomplex from Symbiodinium
Method: single particle / : Li XY, Li ZH, Wang WD

PDB-8jw0:
PSI-AcpPCI supercomplex from Amphidinium carterae
Method: single particle / : Li ZH, Li XY, Wang WD

PDB-8jze:
PSI-AcpPCI supercomplex from Symbiodinium
Method: single particle / : Li ZH, Li XY, Wang WD

PDB-8jzf:
PSI-AcpPCI supercomplex from Symbiodinium
Method: single particle / : Li XY, Li ZH, Wang WD

EMDB-38214:
The structure of ASFV A137R
Method: single particle / : Li C, Song H, Gao GF

PDB-8xb8:
The structure of ASFV A137R
Method: single particle / : Li C, Song H, Gao GF

EMDB-29723:
Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate, 30S focused map
Method: single particle / : Bhattacharjee S, Brown PZ, Frank J

EMDB-29724:
Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate consensus, 30S focused
Method: single particle / : Bhattacharjee S, Feng X, Maji S, Dadhwal P, Zhang Z, Brown PZ, Frank J

EMDB-29833:
Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate, 30S focused
Method: single particle / : Bhattacharjee S, Feng X, Maji S, Dadhwal P, Zhang Z, Brown PZ, Frank J

EMDB-29834:
Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate, 50S focused from 30S subtracted
Method: single particle / : Bhattacharjee S, Brown PZ, Frank J

EMDB-29842:
Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate, 50S focused and 30S subtracted
Method: single particle / : Bhattacharjee S, Brown PZ, Frank J

EMDB-33990:
Cryo-EM structure of EBV gHgL-gp42 in complex with mAbs 3E8 and 5E3 (localized refinement)
Method: single particle / : Liu L, Sun H, Jiang Y, Hong J, Zheng Q, Li S, Chen Y, Xia N

EMDB-33992:
Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 10E4 (localized refinement)
Method: single particle / : Liu L, Sun H, Jiang Y, Hong J, Zheng Q, Li S, Chen Y, Xia N

EMDB-33993:
Cryo-EM density map of EBV gHgL-gp42 in complex with four mAbs 5E3, 3E8, 6H2 and 10E4
Method: single particle / : Liu L, Sun H, Jiang Y, Liu X, Zhao D, Zheng Q, Li S, Chen Y, Xia N

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more