[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 165 items for (author: shi & jp)

EMDB-29943:
Cryo-EM Structure of the Prostaglandin E2 Receptor 4 Coupled to G Protein
Method: single particle / : Shenming H, Mengyao X, Lei L, Yang D, Sheng C, Jinpeng S

EMDB-29944:
Cryo-EM Structure of the Prostaglandin E2 Receptor 4 Coupled to G Protein
Method: single particle / : Shenming H, Mengyao X, Lei L, Jiangqian M, Sheng C, Jinpeng S

EMDB-29945:
Cryo-EM Structure of the Prostaglandin E2 Receptor 4 Coupled to G Protein
Method: single particle / : Shenming H, Mengyao X, Lei L, Jianqiang M, Jinpeng S

EMDB-29946:
Cryo-EM Structure of the Prostaglandin E2 Receptor 3 Coupled to G Protein
Method: single particle / : Shenming H, Mengyao X, Lei L, Yang D, Shiyi G, Jinpeng S

EMDB-29935:
Cryo-EM Structure of the Prostaglandin E Receptor EP4 Coupled to G Protein
Method: single particle / : Huang SM, Xiong MY, Liu L, Mu J, Sheng C, Sun J

EMDB-29940:
Cryo-EM Structure of the Prostaglandin E2 Receptor 4 Coupled to G Protein
Method: single particle / : Huang SM, Xiong MY, Liu L, Mu J, Sheng C, Sun J

EMDB-16110:
Human Urea Transporter UT-A (N-Terminal Domain Model)
Method: single particle / : Chi G, Pike ACW, Maclean EM, Mukhopadhyay SMM, Bohstedt T, Scacioc A, Wang D, McKinley G, Fernandez-Cid A, Arrowsmith CH, Bountra C, Edwards A, Burgess-Brown NA, van Putte W, Duerr K

EMDB-16111:
Map of Human Urea Transporter UT-A Collected with 0 and 30 Degree Tilts
Method: single particle / : Chi G, Pike ACW, Maclean EM, Bohstedt T, Wang D, Mckinley G, Fernandez-Cid A, Mukhopadhyay SMM, Burgess-Brown NA, Edwards A, Arrowsmith C, Bountra C, Duerr KL

EMDB-16112:
Human Urea Transporter UT-B/UT1 in Complex with Inhibitor UTBinh-14
Method: single particle / : Chi G, Dietz L, Pike ACW, Maclean EM, Mukhopadhyay SMM, Bohstedt T, Wang D, Scacioc A, McKinley G, Arrowsmith CH, Edwards A, Bountra C, Fernandez-Cid A, Burgess-Brown NA, Duerr KL

EMDB-41109:
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
Method: single particle / : Abini-Agbomson S, Armache KJ

EMDB-41113:
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
Method: single particle / : Abini-Agbomson S, Armache KJ

EMDB-41259:
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
Method: single particle / : Abini-Agbomson S, Armache KJ

EMDB-41272:
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
Method: single particle / : Abini-Agbomson S, Armache KJ

EMDB-35522:
Cryo-EM structure of the TUG891 bound GPR120-Giq complex(mask on receptor)
Method: single particle / : Mao C, Xiao P, Tao X, Qin J, He Q, Zhang C, Yu X, Zhang Y, Sun J

EMDB-35523:
Cryo-EM structure of the TUG891 bound GPR120-Giq complex(mask on Giq-scFV16 complex)
Method: single particle / : Mao C, Xiao P, Tao X, Qin J, He Q, Zhang C, Yu X, Zhang Y, Sun J

EMDB-35524:
Cryo-EM structure of the eicosapentaenoic acid bound GPR120-Gi1 complex(mask on receptor)
Method: single particle / : Mao C, Xiao P, Tao X, Qin J, He Q, Zhang C, Yu X, Zhang Y, Sun J

EMDB-35525:
Cryo-EM structure of the eicosapentaenoic acid bound GPR120-Gi1 complex(mask on Gil-scFV16 complex)
Method: single particle / : Mao C, Xiao P, Tao X, Qin J, He Q, Zhang C, Yu X, Zhang Y, Sun J

EMDB-35529:
Cryo-EM structure of the TUG891 bound GPR120-Giq complex (consensus map)
Method: single particle / : Mao C, Xiao P, Tao X, Qin J, He Q, Zhang C, Yu X, Zhang Y, Sun J

EMDB-35533:
Cryo-EM structure of the eicosapentaenoic acid bound GPR120-Gi complex(consensus map)
Method: single particle / : Mao C, Xiao P, Tao X, Qin J, He Q, Zhang C, Yu X, Zhang Y, Sun J

EMDB-35356:
Cryo-EM structure of the 9-hydroxystearic acid bound GPR120-Gi complex
Method: single particle / : Mao C, Xiao P, Tao X, Qin J, He Q, Zhang C, Yu X, Zhang Y, Sun J

EMDB-35357:
Cryo-EM structure of the linoleic acid bound GPR120-Gi complex
Method: single particle / : Mao C, Xiao P, Tao X, Qin J, He Q, Zhang C, Yu X, Zhang Y, Sun J

EMDB-35358:
Cryo-EM structure of the oleic acid bound GPR120-Gi complex
Method: single particle / : Mao C, Xiao P, Tao X, Qin J, He Q, Zhang C, Yu X, Zhang Y, Sun J

EMDB-35359:
Cryo-EM structure of the TUG891 bound GPR120-Gi complex
Method: single particle / : Mao C, Xiao P, Tao X, Qin J, He Q, Zhang C, Yu X, Zhang Y, Sun J

EMDB-35360:
Cryo-EM structure of the eicosapentaenoic acid bound GPR120-Gi complex
Method: single particle / : Mao C, Xiao P, Tao X, Qin J, He Q, Zhang C, Yu X, Zhang Y, Sun J

EMDB-29736:
Cryo-EM structure of the TUG891 bound GPR120-Giq complex
Method: single particle / : Mao C, Xiao P, Tao X, Qin J, He Q, Zhang C, Yu X, Zhang Y, Sun J

EMDB-26936:
Complex of Plasmodium falciparum circumsporozoite protein with 850 Fab
Method: single particle / : Kucharska I, Prieto K, Rubinstein JL, Julien JP

EMDB-26262:
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21F2
Method: single particle / : Patel A, Ortlund E

EMDB-26669:
SARS-Cov2 Omicron varient S protein structure in complex with neutralizing monoclonal antibody 002-S21F2
Method: single particle / : Patel A, Ortlund E

PDB-7u0p:
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21F2
Method: single particle / : Patel A, Ortlund E

PDB-7upl:
SARS-Cov2 Omicron varient S protein structure in complex with neutralizing monoclonal antibody 002-S21F2
Method: single particle / : Patel A, Ortlund E

EMDB-33452:
Cryo-EM structure of the R399-bound GPBAR-Gs complex
Method: single particle / : Ma L, Yang F, Wu X, Mao C, Sun J, Yu X, Zhang Y, Zhang P

EMDB-31232:
Structural basis for the tethered peptide activation of adhesion GPCRs
Method: single particle / : Ping YQ, Xiao P, Yang F, Zhao RJ, Guo SC, Yan X, Wu X, Sun JP

EMDB-31254:
GPR114-Gs-scFv16 complex
Method: single particle / : Ping Y

EMDB-32526:
Cryo-EM structure of LY341495/NAM-bound mGlu3
Method: single particle / : Fang W, Yang F, Xu CJ, Ling SL, Lin L, Zhou YX, Sun WJ, Wang XM, Liu P, Rondard P, Pan S, Pin JP, Tian CL, Liu JF

EMDB-32527:
Cryo-EM structure of inactive mGlu3 bound to LY341495
Method: single particle / : Fang W, Yang F, Xu CJ, Ling SL, Lin L, Zhou YX, Sun WJ, Wang XM, Liu P, Rondard P, Pan S, Pin JP, Tian CL, Liu JF

EMDB-32530:
Cryo-EM structure of LY2794193-bound mGlu3
Method: single particle / : Fang W, Yang F, Xu CJ, Ling SL, Lin L, Zhou YX, Sun WJ, Wang XM, Liu P, Rondard P, Pan S, Pin JP, Tian CL, Liu JF

EMDB-31061:
A dual mechanism of action of AT-527 against SARS-CoV-2 polymerase
Method: single particle / : Shannon A, Fattorini V

EMDB-30817:
High Resolution Cryo-EM Structure of Cytochrome bo3 from E. Coli Reveals High Affinity Quinol Binding Site and Interactions of Protein with Lipids
Method: single particle / : Zhu JP, Zhang K, Gennis RB, Li J, Han L

EMDB-30818:
High Resolution Cryo-EM Structure of Cytochrome bo3 from E. Coli Reveals High Affinity Quinol Binding Site and Interactions of Protein with Lipids
Method: single particle / : Zhu JP, Zhang K, Gennis RB, Li J, Han L

EMDB-30819:
High Resolution Cryo-EM Structure of Cytochrome bo3 from E. Coli Reveals High Affinity Quinol Binding Site and Interactions of Protein with Lipids
Method: single particle / : Zhu JP, Zhang K, Gennis RB, Li J, Han L

EMDB-12240:
Bacterial 30S ribosomal subunit assembly complex state M (Consensus refinement)
Method: single particle / : Schedlbauer A, Iturrioz I

EMDB-12243:
Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement)
Method: single particle / : Schedlbauer A, Iturrioz I

EMDB-12245:
Complete Bacterial 30S ribosomal subunit assembly complex state F (+RsgA)(Consensus Refinement)
Method: single particle / : Schedlbauer A, Iturrioz I

EMDB-12247:
Bacterial 30S ribosomal subunit assembly complex state A (Consensus refinement)
Method: single particle / : Schedlbauer A, Iturrioz I

EMDB-12248:
Bacterial 30S ribosomal subunit assembly complex state C (Consensus Refinement)
Method: single particle / : Schedlbauer A, Iturrioz I

EMDB-12249:
Bacterial 30S ribosomal subunit assembly complex state D (Consensus refinement)
Method: single particle / : Schedlbauer A, Iturrioz I

EMDB-12251:
Complete Bacterial 30S ribosomal subunit assembly complex state I (Consensus Refinement)
Method: single particle / : Schedlbauer A, Iturrioz I

EMDB-24642:
SARS-CoV-2 Spike bound to Fab PDI 210
Method: single particle / : Pymm P, Glukhova A, Black K, Tham WH

EMDB-24643:
SARS-CoV-2 Spike bound to Fab PDI 96
Method: single particle / : Pymm P, Glukhova A, Black K, Tham WH

EMDB-24644:
SARS-CoV-2 Spike bound to Fab PDI 215
Method: single particle / : Black K, Glukhova A, Pymm P, Tham WH

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more