[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 38 items for (author: shalev-benami & m)

EMDB-15786:
Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli (Apo form)
Method: single particle / : Degtjarik O, Smithers L, Boland C, Caffrey M, Shalev Benami M

EMDB-15787:
Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli in complex with PE
Method: single particle / : Degtjarik O, Smithers L, Boland C, Caffrey M, Shalev Benami M

EMDB-15788:
Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli in complex with PE (C387S mutant)
Method: single particle / : Degtjarik O, Smithers L, Boland C, Caffrey M, Shalev Benami M

EMDB-15789:
Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli in complex with Lyso-PE
Method: single particle / : Degtjarik O, Smithers L, Boland C, Caffrey M, Shalev Benami M

EMDB-15790:
Cryo-EM structure apolipoprotein N-acyltransferase Lnt from E.coli in complex with FP3
Method: single particle / : Degtjarik O, Smithers L, Boland C, Caffrey M, Shalev Benami M

EMDB-15791:
Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli in complex with Pam3
Method: single particle / : Degtjarik O, Smithers L, Boland C, Caffrey M, Shalev Benami M

PDB-8b0k:
Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli (Apo form)
Method: single particle / : Degtjarik O, Smithers L, Boland C, Caffrey M, Shalev Benami M

PDB-8b0l:
Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli in complex with PE
Method: single particle / : Degtjarik O, Smithers L, Boland C, Caffrey M, Shalev Benami M

PDB-8b0m:
Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli in complex with PE (C387S mutant)
Method: single particle / : Degtjarik O, Smithers L, Boland C, Caffrey M, Shalev Benami M

PDB-8b0n:
Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli in complex with Lyso-PE
Method: single particle / : Degtjarik O, Smithers L, Boland C, Caffrey M, Shalev Benami M

PDB-8b0o:
Cryo-EM structure apolipoprotein N-acyltransferase Lnt from E.coli in complex with FP3
Method: single particle / : Degtjarik O, Smithers L, Boland C, Caffrey M, Shalev Benami M

PDB-8b0p:
Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli in complex with Pam3
Method: single particle / : Degtjarik O, Smithers L, Boland C, Caffrey M, Shalev Benami M

EMDB-13485:
Cryo-EM structure of Bestrhodopsin (rhodopsin-rhodopsin-bestrophin) complex
Method: single particle / : Matzov D, Kaczmarczyk I, Shalev-Benami M

PDB-7pl9:
Cryo-EM structure of Bestrhodopsin (rhodopsin-rhodopsin-bestrophin) complex
Method: single particle / : Matzov D, Kaczmarczyk I, Shalev-Benami M

EMDB-25076:
LPHN3 (ADGRL3) 7TM domain bound to tethered agonist in complex with G protein heterotrimer
Method: single particle / : Barros-Alvarez X, Panova O, Skiniotis G

EMDB-25077:
GPR56 (ADGRG1) 7TM domain bound to tethered agonist in complex with G protein heterotrimer
Method: single particle / : Barros-Alvarez X, Panova O, Skiniotis G

PDB-7sf7:
LPHN3 (ADGRL3) 7TM domain bound to tethered agonist in complex with G protein heterotrimer
Method: single particle / : Barros-Alvarez X, Panova O, Skiniotis G

PDB-7sf8:
GPR56 (ADGRG1) 7TM domain bound to tethered agonist in complex with G protein heterotrimer
Method: single particle / : Barros-Alvarez X, Panova O, Skiniotis G

EMDB-11927:
Melanocortin receptor 4 (MC4R) Gs protein complex
Method: single particle / : Degtjarik O, Israeli H, Prabahar V, Shalev-Benami M

PDB-7aue:
Melanocortin receptor 4 (MC4R) Gs protein complex
Method: single particle / : Degtjarik O, Israeli H, Prabahar V, Shalev-Benami M

EMDB-11232:
Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
Method: single particle / : Matzov D, Halfon H

PDB-6zj3:
Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
Method: single particle / : Matzov D, Halfon H, Zimmerman E, Rozenberg H, Bashan A, Gray MW, Yonath AE, Shalev-Benami M

EMDB-10223:
Cryo-EM Structure of T. kodakarensis 70S ribosome
Method: single particle / : Matzov D, Sas-Chen A

EMDB-10224:
Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain
Method: single particle / : Matzov D, Sas-Chen A

EMDB-10503:
Cryo-EM Structure of T. kodakarensis 70S ribosome
Method: single particle / : Matzov D, Sas-Chen A

PDB-6skf:
Cryo-EM Structure of T. kodakarensis 70S ribosome
Method: single particle / : Matzov D, Sas-Chen A, Thomas JM, Santangelo T, Meier JL, Schwartz S, Shalev-Benami M

PDB-6skg:
Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain
Method: single particle / : Matzov D, Sas-Chen A, Thomas JM, Santangelo T, Meier JL, Schwartz S, Shalev-Benami M

PDB-6th6:
Cryo-EM Structure of T. kodakarensis 70S ribosome
Method: single particle / : Matzov D, Sas-Chen A, Thomas JM, Santangelo T, Meier JL, Schwartz S, Shalev-Benami M

EMDB-0339:
Cannabinoid Receptor 1-G Protein Complex
Method: single particle / : Krishna Kumar K, Shalev-Benami M, Hu H, Weis WI, Kobilka BK, Skiniotis G

PDB-6n4b:
Cannabinoid Receptor 1-G Protein Complex
Method: single particle / : Krishna Kumar K, Shalev-Benami M, Hu H, Weis WI, Kobilka BK, Skiniotis G

EMDB-7526:
Human Teneurin 2 extra-cellular region
Method: single particle / : Shalev-Benami M, Li J, Sudhof T, Skiniotis G, Arac D

PDB-6cmx:
Human Teneurin 2 extra-cellular region
Method: single particle / : Shalev-Benami M, Li J, Sudhof T, Skiniotis G, Arac D

EMDB-7024:
Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin
Method: single particle / : Shalev-Benami M, Zhang Y, Rozenberg H, Matzov D, Zimmerman E, Bashan A, Jaffe CL, Yonath A, Skiniotis G

EMDB-7025:
Cryo-EM structure of of the large subunit of Leishmania ribosome bound to paromomycin
Method: single particle / : Shalev-Benami M, Zhang Y, Rozenberg H, Nobe Y, Taoka M, Matzov D, Zimmerman E, Bashan A, Isobe T, Jaffe CL, Yonath A, Skiniotis G

PDB-6az1:
Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin
Method: single particle / : Shalev-Benami M, Zhang Y, Rozenberg H, Matzov D, Zimmerman E, Bashan A, Jaffe CL, Yonath A, Skiniotis G

PDB-6az3:
Cryo-EM structure of of the large subunit of Leishmania ribosome bound to paromomycin
Method: single particle / : Shalev-Benami M, Zhang Y, Rozenberg H, Nobe Y, Taoka M, Matzov D, Zimmerman E, Bashan A, Isobe T, Jaffe CL, Yonath A, Skiniotis G

EMDB-6583:
Cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
Method: single particle / : Shalev-Benami M, Zhang Y, Matzov D, Halfon Y, Zackay A, Rozenberg H, Zimmerman E, Bashan A, Jaffe CL, Yonath A, Skiniotis G

PDB-3jcs:
2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
Method: single particle / : Shalev-Benami M, Zhang Y, Matzov D, Halfon Y, Zackay A, Rozenberg H, Zimmerman E, Bashan A, Jaffe CL, Yonath A, Skiniotis G

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more