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Showing all 43 items for (author: shaikh & t)

EMDB-17015:
Cryo-EM map of the focused refinement of the subfamily III haloalkane dehalogenase from Haloferax mediterranei dimer forming hexameric assembly.
Method: single particle / : Polak M, Novacek J, Chmelova K, Marek M

PDB-8ooh:
Cryo-EM map of the focused refinement of the subfamily III haloalkane dehalogenase from Haloferax mediterranei dimer forming hexameric assembly.
Method: single particle / : Polak M, Novacek J, Chmelova K, Marek M

EMDB-16998:
Cryo-EM structure of subfamily III haloalkane dehalogenase DhmeA from Haloferax mediterranei
Method: single particle / : Marek M, Novacek J, Polak M, Chmelova K

EMDB-15714:
Resting state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand JNJ-61432059
Method: single particle / : Zhang D, Lape R, Shaikh S, Kohegyi B, Watson JF, Cais O, Nakagawa T, Greger I

EMDB-15716:
Resting state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand JNJ-55511118
Method: single particle / : Zhang D, Lape R, Shaikh S, Kohegyi B, Watson JF, Cais O, Nakagawa T, Greger IH

EMDB-15717:
Resting state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand LY3130481
Method: single particle / : Zhang D, Lape R, Shaikh S, Kohegyi B, Watson JF, Cais O, Nakagawa T, Greger IH

EMDB-15718:
Open state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand JNJ-61432059
Method: single particle / : Zhang D, Lape R, Shaikh S, Kohegyi B, Watson JF, Cais O, Nakagawa T, Greger IH

PDB-8ayl:
Resting state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand JNJ-61432059
Method: single particle / : Zhang D, Lape R, Shaikh S, Kohegyi B, Watson JF, Cais O, Nakagawa T, Greger I

PDB-8aym:
Resting state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand JNJ-55511118
Method: single particle / : Zhang D, Lape R, Shaikh S, Kohegyi B, Watson JF, Cais O, Nakagawa T, Greger IH

PDB-8ayn:
Resting state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand LY3130481
Method: single particle / : Zhang D, Lape R, Shaikh S, Kohegyi B, Watson JF, Cais O, Nakagawa T, Greger IH

PDB-8ayo:
Open state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand JNJ-61432059
Method: single particle / : Zhang D, Lape R, Shaikh S, Kohegyi B, Watson JF, Cais O, Nakagawa T, Greger IH

EMDB-12273:
Cryo-EM structure of the human FERRY complex
Method: single particle / : Quentin D, Klink BU, Raunser S

PDB-7nd2:
Cryo-EM structure of the human FERRY complex
Method: single particle / : Quentin D, Klink BU, Raunser S

EMDB-13969:
Active state of GluA1/2 in complex with TARP gamma 8, L-glutamate and CTZ
Method: single particle / : Herguedas B, Kohegyi B, Zhang D, Greger IH

EMDB-13970:
Active state of GluA1/A2 AMPA receptor in complex with TARP gamma-8 (TMD)
Method: single particle / : Herguedas B, Kohegyi B, Dohrke JN, Watson JF, Zhang D, Ho H, Shaikh SH, Lape R, Krieger JM, Greger IH

EMDB-13971:
Active state of GluA1/A2 AMPA receptor in complex with TARP gamma-8 (LBD)
Method: single particle / : Herguedas B, Kohegyi B, Dohrke JN, Watson JF, Zhang D, Ho H, Shaikh SH, Lape R, Krieger JM, Greger IH

EMDB-13972:
Desensitized state of GluA1/2 AMPA receptor in complex with TARP-gamma 8 (TMD-LBD)
Method: single particle / : Herguedas B, Kohegyi B, Dohrke JN, Watson JF, Zhang D, Ho H, Shaikh S, Lape R, Krieger JM, Greger IH

EMDB-13973:
Desensitized state of GluA1/2 AMPA receptor in complex with TARP-gamma 8 (TMD)
Method: single particle / : Herguedas B, Kohegyi B, Dohrke JN, Watson JF, Zhang D, Ho H, Shaikh SH, Lape R, Krieger JM, Greger IH

EMDB-13974:
Desensitized state of GluA1/2 AMPA receptor in complex with TARP-gamma 8 (LBD)
Method: single particle / : Herguedas B, Kohegyi B, Dohrke JN, Watson JF, Zhang D, Ho H, Shaikh SH, Lape R, Krieger JM, Greger IH

PDB-7qhb:
Active state of GluA1/2 in complex with TARP gamma 8, L-glutamate and CTZ
Method: single particle / : Herguedas B, Kohegyi B, Zhang D, Greger IH

PDB-7qhh:
Desensitized state of GluA1/2 AMPA receptor in complex with TARP-gamma 8 (TMD-LBD)
Method: single particle / : Herguedas B, Kohegyi B, Dohrke JN, Watson JF, Zhang D, Ho H, Shaikh S, Lape R, Krieger JM, Greger IH

EMDB-2970:
Cryo-EM structure of E. coli 70S ribosome bound to additional non-ribosomal proteins.
Method: single particle / : Shasmal M, Dey S, Shaikh TR, Bhakta S, Sengupta J

EMDB-2972:
Cryo-EM structure of E. coli 70S ribosome bound to additional non-ribosomal proteins.
Method: single particle / : Shasmal M, Dey S, Shaikh TR, Bhakta S, Sengupta J

PDB-5flx:
Mammalian 40S HCV-IRES complex
Method: single particle / : Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT

EMDB-3221:
Mammalian 80S HCV-IRES complex, Classical
Method: single particle / : Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT

EMDB-3223:
Mammalian 80S HCV-IRES complex, Classical / no head tilt
Method: single particle / : Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT

EMDB-3224:
Mammalian 40S HCV-IRES complex
Method: single particle / : Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT

EMDB-3225:
Mammalian 80S HCV-IRES complex, Rolled
Method: single particle / : Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT

EMDB-3226:
Mammalian 80S HCV-IRES complex, Rotated
Method: single particle / : Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT

PDB-4v69:
Ternary complex-bound E.coli 70S ribosome.
Method: single particle / : Villa E, Sengupta J, Trabuco LG, LeBarron J, Baxter WT, Shaikh TR, Grassucci RA, Nissen P, Ehrenberg M, Schulten K, Frank J

EMDB-1915:
Initial binding position of RRF on the post-termination complex
Method: single particle / : Yokoyama T, Shaikh TR, Iwakura N, Kaji H, Kaji A, Agrawal RK

EMDB-1916:
Initial binding conformation of RRF on the post-termination complex
Method: single particle / : Yokoyama T, Shaikh TR, Iwakura N, Kaji H, Kaji A, Agrawal RK

EMDB-1917:
Intermediate binding positions of RRF and EF-G on the post-termination complex
Method: single particle / : Yokoyama T, Shaikh TR, Iwakura N, Kaji H, Kaji A, Agrawal RK

EMDB-1918:
Binding conformations and positions of RRF and EF-G during intermediate state of ribosome recycling
Method: single particle / : Yokoyama T, Shaikh TR, Iwakura N, Kaji H, Kaji A, Agrawal RK

PDB-3j0d:
Models for the T. thermophilus ribosome recycling factor bound to the E. coli post-termination complex
Method: single particle / : Yokoyama T, Shaikh TR, Iwakura N, Kaji H, Kaji A, Agrawal RK

PDB-3j0e:
Models for the T. thermophilus ribosome recycling factor and the E. coli elongation factor G bound to the E. coli post-termination complex
Method: single particle / : Yokoyama T, Shaikh TR, Iwakura N, Kaji H, Kaji A, Agrawal RK

EMDB-5036:
Aminoacyl-tRNA-EF-Tu-GDP-kir ternary complex-bound E. coli 70S ribosome
Method: single particle / : Villa E, Sengupta J, Trabuco LG, LeBarron J, Baxter WT, Shaikh TR, Grassucci RA, Nissen P, Ehrenberg M, Schulten K, Frank J

EMDB-1143:
Structure of the E. coli protein-conducting channel bound to a translating ribosome.
Method: single particle / : Mitra K, Schaffitzel C, Shaikh T, Tama F, Jenni S, Brooks III CL, Ban N, Frank J

PDB-2akh:
Normal mode-based flexible fitted coordinates of a non-translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
Method: single particle / : Mitra KM, Schaffitzel C, Shaikh T, Tama F, Jenni S, Brooks III CL, Ban N, Frank J

PDB-2aki:
Normal mode-based flexible fitted coordinates of a translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
Method: single particle / : Mitra K, Schaffitzel C, Shaikh T, Tama F, Jenni S, Brooks III CL, Ban N, Frank J

EMDB-1132:
A partial atomic structure for the flagellar hook of Salmonella typhimurium.
Method: helical / : Shaikh TR, Thomas DR, Chen JZ, Samatey FA, Matsunami H, Imada K, Namba K, DeRosier DJ

PDB-2bgy:
Fit of the x-ray structure of the baterial flagellar hook fragment flge31 into an EM map from the hook of Caulobacter crescentus.
Method: electron crystallography / : Shaikh TR, Thomas DR, Chen JZ, Samatey FA, Matsunami H, Imada K, Namba K, DeRosier DJ

PDB-2bgz:
ATOMIC MODEL OF THE BACTERIAL FLAGELLAR BASED ON DOCKING AN X-RAY DERIVED HOOK STRUCTURE INTO AN EM MAP.
Method: electron crystallography / : Shaikh TR, Thomas DR, Chen JZ, Samatey FA, Matsunami H, Imada K, Namba K, Derosier DJ

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

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