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Showing all 24 items for (author: scott & jd)

EMDB-41374:
Antibody N3-1 bound to RBDs in the up and down conformations
Method: single particle / : Hsieh CL, McLellan JS

EMDB-41382:
Antibody N3-1 bound to RBD in the up conformation
Method: single particle / : Hsieh CL, McLellan JS

EMDB-41399:
Antibody N3-1 bound to SARS-CoV-2 spike
Method: single particle / : Hsieh CL, McLellan JS

EMDB-17540:
Cryo-EM structure of full-length human UBR5 (homotetramer)
Method: single particle / : Aguirre JD, Kater L, Kempf G, Cavadini S, Thoma NH

EMDB-17542:
Negative stain map of UBR5 (dimer) in complex with RARA/RXRA
Method: single particle / : Aguirre JD, Cavadini S, Kempf G, Kater L, Thoma NH

EMDB-27732:
eEF1A(GDP)aa-tRNA stalled on the rabbit 80S ribosome by ternatin-4
Method: single particle / : Brown A, Shao S, Rundlet EJ, Juette MF, Carelli JD, Taunton J, Blanchard SC

EMDB-27691:
eEF1A(GDP)aa-tRNA stalled on the human 80S ribosome by didemnin B
Method: single particle / : Rundlet EJ, Juette MF, Blanchard SC, Ferguson A, Taunton J, Carelli JD

EMDB-27694:
eEF1A(GDP)aa-tRNA stalled on the human 80S ribosome by ternatin-4
Method: single particle / : Rundlet EJ, Ferguson A, Juette MF, Carelli JD, Taunton J, Blanchard SC

EMDB-26507:
SARS-CoV-2 spike in complex with Multivalent miniprotein inhibitor FUS231-P24 (2RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26508:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS231-P24 (3RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26509:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS31-G10 (2RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26510:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS31-G10 (3RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26511:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26512:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-25810:
Human Metapneumovirus F trimer in complex with M4B06 Fab
Method: single particle / : Xiao X, Tian D, Yan X, Eddins NJ, Galli JD, Su H, Vora KA, Chen Z, Zhang L

EMDB-21147:
Cryo-EM structure of the Glucagon-like peptide-1 receptor in complex with G protein, GLP-1 peptide and a positive allosteric modulator
Method: single particle / : Sun B, Feng D, Bueno A, Kobilka B, Sloop K

EMDB-11002:
CryoEM structure of bovine cytochrome bc1 in complex with a tetrahydroquinolone inhibitor
Method: single particle / : Muench SP, Johnson R, Amporndanai K, Atonyuk S

EMDB-21411:
HIV envelope glycoprotein bound with soluble CD4 (D1-D2) and antibody 17b on AT-2 treated BaL strain virus
Method: subtomogram averaging / : Jun L, Ze L, Li W

EMDB-21412:
Ligand-free HIV envelope glycoprotein on AT-2 treated BaL strain virus
Method: subtomogram averaging / : Jun L, Ze L, Li W

EMDB-21413:
HIV envelope glycoprotein bound with antibodies 10-1074 and 3BNC117 on AT-2 treated BaL strain virus
Method: subtomogram averaging / : Jun L, Ze L, Li W

EMDB-8125:
BG505 SOSIP.664 HIV-1 Env trimer in complex with anti-HIV fusion peptide targeting N123-VRC34.01 Fab
Method: single particle / : Ozorowski G, Ward AB

EMDB-5755:
3D EM Reconstruction of the AKAP18-PKA Complex in a Bent Conformation
Method: single particle / : Smith FD, Reichow SL, Esseltine JL, Shi D, Langeberg LK, Scott JD, Gonen T

EMDB-5756:
3D EM Reconstruction of the AKAP18-PKA Complex in a Linear Conformation
Method: single particle / : Smith FD, Reichow SL, Esseltine JL, Shi D, Langeberg LK, Scott JD, Gonen T

EMDB-1200:
Automated cryoEM data acquisition and analysis of 284742 particles of GroEL.
Method: single particle / : Stagg SM, Pulokas J, Fellmann D, Cheng A, Quispe JD, Mallick SP, Avila RM, Carragher B, Potter CS

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

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Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

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Related info.:EMN Search / EMN Statistics

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Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

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