[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 590 items for (author: sato & c)

EMDB-38986:
P-glycoprotein in complex with UIC2 Fab and triple elacridar molecules in LMNG detergent
Method: single particle / : Hamaguchi-Suzuki N, Adachi N, Moriya T, Kawasaki M, Suzuki K, Anzai N, Senda T, Murata T

EMDB-38987:
P-glycoprotein in complex with UIC2 Fab and triple elacridar molecules in nanodisc
Method: single particle / : Hamaguchi-Suzuki N, Adachi N, Moriya T, Kawasaki M, Suzuki K, Anzai N, Senda T, Murata T

PDB-8y6h:
P-glycoprotein in complex with UIC2 Fab and triple elacridar molecules in LMNG detergent
Method: single particle / : Hamaguchi-Suzuki N, Adachi N, Moriya T, Kawasaki M, Suzuki K, Anzai N, Senda T, Murata T

PDB-8y6i:
P-glycoprotein in complex with UIC2 Fab and triple elacridar molecules in nanodisc
Method: single particle / : Hamaguchi-Suzuki N, Adachi N, Moriya T, Kawasaki M, Suzuki K, Anzai N, Senda T, Murata T

EMDB-17171:
CTE typeI tau filament from Guam ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

EMDB-17173:
CTE typeIII tau filament from Guam ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

EMDB-17174:
CTE typeII tau filament from Guam ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

EMDB-17175:
TMEM106B Fold1-s filament from Guam ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

EMDB-17176:
TMEM106B Fold I-d filament from Guam ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

EMDB-17177:
Ab typeII filament from Guam ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

EMDB-17178:
CTE typeI tau filament from Kii ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

EMDB-17179:
TypeII tau filament from Kii ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

EMDB-17180:
CTE typeIII tau filament
Method: helical / : Tetter S, Qi C, Ryskeldi-Falcon B, Scheres SHW, Goedert M

EMDB-17181:
PHF tau filament from Kii ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

PDB-8ot6:
CTE typeI tau filament from Guam ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

PDB-8ot9:
CTE typeIII tau filament from Guam ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

PDB-8otc:
CTE typeII tau filament from Guam ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

PDB-8otd:
TMEM106B Fold1-s filament from Guam ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

PDB-8ote:
TMEM106B Fold I-d filament from Guam ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

PDB-8otf:
Ab typeII filament from Guam ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

PDB-8otg:
CTE typeI tau filament from Kii ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

PDB-8oth:
TypeII tau filament from Kii ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

PDB-8oti:
CTE typeIII tau filament
Method: helical / : Tetter S, Qi C, Ryskeldi-Falcon B, Scheres SHW, Goedert M

PDB-8otj:
PHF tau filament from Kii ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

EMDB-41062:
CryoEM structure of an inward-facing MelBSt at a Na(+)-bound and sugar low-affinity conformation
Method: single particle / : Guan L

PDB-8t60:
CryoEM structure of an inward-facing MelBSt at a Na(+)-bound and sugar low-affinity conformation
Method: single particle / : Guan L

EMDB-35411:
Dibekacin-bound E.coli 70S ribosome in the PURE system
Method: single particle / : Tomono J, Asano K, Chiashi T, Tanaka Y, Yokoyama T

EMDB-35412:
Arbekacin-bound E.coli 70S ribosome in the PURE system
Method: single particle / : Tomono J, Asano K, Chiashi T, Tanaka Y, Yokoyama T

EMDB-35413:
Dibekacin-added human 80S ribosome
Method: single particle / : Tomono J, Asano K, Chiashi T, Tanaka Y, Yokoyama T

EMDB-35414:
Arbekacin-added human 80S ribosome
Method: single particle / : Tomono J, Asano K, Chiashi T, Tanaka Y, Yokoyama T

PDB-8ifb:
Dibekacin-bound E.coli 70S ribosome in the PURE system
Method: single particle / : Tomono J, Asano K, Chiashi T, Tanaka Y, Yokoyama T

PDB-8ifc:
Arbekacin-bound E.coli 70S ribosome in the PURE system
Method: single particle / : Tomono J, Asano K, Chiashi T, Tanaka Y, Yokoyama T

PDB-8ifd:
Dibekacin-added human 80S ribosome
Method: single particle / : Tomono J, Asano K, Chiashi T, Tanaka Y, Yokoyama T

PDB-8ife:
Arbekacin-added human 80S ribosome
Method: single particle / : Tomono J, Asano K, Chiashi T, Tanaka Y, Yokoyama T

EMDB-36948:
Human gamma-secretase in complex with a substrate mimetic
Method: single particle / : Shi YG, Zhou R, Wolfe MS

PDB-8k8e:
Human gamma-secretase in complex with a substrate mimetic
Method: single particle / : Shi YG, Zhou R, Wolfe MS

EMDB-16781:
NTD focused cryo-EM map of p97/VCP in ADP.Pi state
Method: single particle / : Cheng TC, Sakata E, Schuetz AK

EMDB-17016:
Full composite cryo-EM map of p97/VCP in ADP.Pi state
Method: single particle / : Cheng TC, Sakata E, Schuetz AK

EMDB-17024:
D1-D2 ring focused cryo-EM map of p97/VCP in ADP.Pi state
Method: single particle / : Cheng TC, Sakata E, Schuetz AK

EMDB-17128:
Consensus cryo-EM map of p97/VCP in ADP.Pi state
Method: single particle / : Cheng TC, Sakata E, Schuetz AK

PDB-8ooi:
Full composite cryo-EM map of p97/VCP in ADP.Pi state
Method: single particle / : Cheng TC, Sakata E, Schuetz AK

EMDB-34981:
Cryo-EM structure of human NTCP-myr-preS1-YN9048Fab complex
Method: single particle / : Asami J, Shimizu T, Ohto U

EMDB-34982:
Cryo-EM structure of human NTCP-myr-preS1-YN9016Fab complex
Method: single particle / : Asami J, Shimizu T, Ohto U

PDB-8hrx:
Cryo-EM structure of human NTCP-myr-preS1-YN9048Fab complex
Method: single particle / : Asami J, Shimizu T, Ohto U

PDB-8hry:
Cryo-EM structure of human NTCP-myr-preS1-YN9016Fab complex
Method: single particle / : Asami J, Shimizu T, Ohto U

EMDB-36724:
Structure of the SARS-CoV-2 XBB.1.5 spike glycoprotein (closed state 1)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

EMDB-36726:
Structure of the SARS-CoV-2 XBB.1.5 spike glycoprotein (closed state 2)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

EMDB-36727:
Structure of SARS-CoV-2 XBB.1.5 spike glycoprotein in complex with ACE2 (1-up state)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

EMDB-36728:
Structure of SARS-CoV-2 XBB.1.5 spike glycoprotein in complex with ACE2 (2-up state)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

EMDB-36729:
Structure of SARS-CoV-2 XBB.1.5 spike RBD in complex with ACE2
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more