[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 52 items for (author: sachse, & c.)

PDB-8akq:
180 A SynPspA rod after incubation with ATP
Method: helical / : Junglas B, Hudina E, Schoennenbeck P, Ritter I, Santiago-Schuebel B, Huesgen P, Sachse C

PDB-8akr:
200 A SynPspA rod after incubation with ATP
Method: helical / : Junglas B, Hudina E, Schoennenbeck P, Ritter I, Santiago-Schuebel B, Huesgen P, Sachse C

PDB-8aks:
215 A SynPspA rod after incubation with ATP
Method: helical / : Junglas B, Hudina E, Schoennenbeck P, Ritter I, Santiago-Schuebel B, Huesgen P, Sachse C

PDB-8akt:
235 A SynPspA rod after incubation with ATP
Method: helical / : Junglas B, Hudina E, Schoennenbeck P, Ritter I, Santiago-Schuebel B, Huesgen P, Sachse C

PDB-8aku:
250 A SynPspA rod after incubation with ATP
Method: helical / : Junglas B, Hudina E, Schoennenbeck P, Ritter I, Santiago-Schuebel B, Huesgen P, Sachse C

PDB-8akv:
270 A SynPspA rod after incubation with ATP
Method: helical / : Junglas B, Hudina E, Schoennenbeck P, Ritter I, Santiago-Schuebel B, Huesgen P, Sachse C

PDB-8akw:
280 A SynPspA rod after incubation with ATP
Method: helical / : Junglas B, Hudina E, Schoennenbeck P, Ritter I, Santiago-Schuebel B, Huesgen P, Sachse C

PDB-8akx:
305 A SynPspA rod after incubation with ATP
Method: helical / : Junglas B, Hudina E, Schoennenbeck P, Ritter I, Santiago-Schuebel B, Huesgen P, Sachse C

PDB-8aky:
290 A SynPspA rod after incubation with ATP
Method: helical / : Junglas B, Hudina E, Schoennenbeck P, Ritter I, Santiago-Schuebel B, Huesgen P, Sachse C

PDB-8akz:
320 A SynPspA rod after incubation with ATP
Method: helical / : Junglas B, Hudina E, Schoennenbeck P, Ritter I, Santiago-Schuebel B, Huesgen P, Sachse C

PDB-8al0:
365 A SynPspA rod after incubation with ATP
Method: helical / : Junglas B, Hudina E, Schoennenbeck P, Ritter I, Santiago-Schuebel B, Huesgen P, Sachse C

PDB-8afx:
Single particle structure of Atg18-WT
Method: single particle / : Mann D, Fromm S, Martinez-Sanchez A, Gopaldass N, Mayer A, Sachse C

PDB-8afq:
Tube assembly of Atg18-PR72AA
Method: helical / : Mann D, Fromm S, Martinez-Sanchez A, Gopaldass N, Mayer A, Sachse C

PDB-8afw:
Tube assembly of Atg18-WT
Method: helical / : Mann D, Fromm S, Martinez-Sanchez A, Gopaldass N, Mayer A, Sachse C

PDB-8afy:
Subtomogram average of membrane-bound Atg18 oligomers
Method: subtomogram averaging / : Mann D, Fromm S, Martinez-Sanchez A, Gopaldass N, Mayer A, Sachse C

PDB-7zw6:
Oligomeric structure of SynDLP
Method: single particle / : Gewehr L, Junglas B, Jilly R, Franz J, Wenyu EZ, Weidner T, Bonn M, Sachse C, Schneider D

PDB-7q22:
cryo iDPC-STEM structure recorded with CSA 2.0
Method: helical / : Sachse C, Leidl ML

PDB-7q23:
cryo iDPC-STEM structure recorded with CSA 3.0
Method: helical / : Sachse C, Leidl ML

PDB-7q2q:
cryo iDPC-STEM structure recorded with CSA 3.5
Method: helical / : Sachse C, Leidl ML

PDB-7q2r:
cryo iDPC-STEM structure recorded with CSA 4.0
Method: helical / : Sachse C, Leidl ML

PDB-7q2s:
cryo iDPC-STEM structure recorded with CSA 4.5
Method: helical / : Sachse C, Leidl ML

PDB-7abk:
Helical structure of PspA
Method: helical / : Junglas B, Huber ST, Mann D, Heidler T, Clarke M, Schneider D, Sachse C

PDB-6zh3:
Cryo-EM structure of ESCRT-III helical Vps24 filaments
Method: helical / : Huber ST, Mostafavi S, Mortensen SA, Sachse C

PDB-6tgp:
Cryo-EM structure of AtNBR1-PB1 filament (S-type)
Method: helical / : Jakobi AJ, Sachse C

PDB-6tgn:
Cryo-EM structure of AtNBR1-PB1 filament (L-type)
Method: helical / : Jakobi AJ, Sachse C

PDB-6tgy:
Cryo-EM structure of p62-PB1 filament (L-type)
Method: helical / : Jakobi AJ, Huber ST, Mortensen SA, Sachse C

PDB-6th3:
Cryo-EM structure of p62-PB1 filament (S-type)
Method: helical / : Jakobi AJ, Huber ST, Mortensen SA, Sachse C

PDB-6sae:
Cryo-EM structure of TMV in water
Method: helical / : Weis F, Beckers M, Sachse C

PDB-6sag:
Cryo-EM structure of TMV with Ca2+ at low pH
Method: helical / : Weis F, Beckers M, Sachse C

PDB-6ggs:
Structure of RIP2 CARD filament
Method: helical / : Pellegrini E, Cusack S, Desfosses A, Schoehn G, Malet H, Gutsche I, Sachse C, Hons M

PDB-5m5x:
RNA Polymerase I elongation complex 1
Method: single particle / : Tafur L, Sadian Y, Hoffmann NA, Jakobi AJ, Wetzel R, Hagen WJH, Sachse C, Muller CW

PDB-5m5y:
RNA Polymerase I elongation complex 2
Method: single particle / : Tafur L, Sadian Y, Hoffmann NA, Jakobi AJ, Wetzel R, Hagen WJH, Sachse C, Muller CW

PDB-5m64:
RNA Polymerase I elongation complex with A49 tandem winged helix domain
Method: single particle / : Tafur L, Sadian Y, Hoffmann NA, Jakobi AJ, Wetzel R, Hagen WJH, Sachse C, Muller CW

PDB-5m5w:
RNA Polymerase I open complex
Method: single particle / : Tafur L, Sadian Y, Hoffmann NA, Jakobi AJ, Wetzel R, Hagen WJH, Sachse C, Muller CW

PDB-5kc2:
Negative stain structure of Vps15/Vps34 complex
Method: single particle / : Kirsten ML, Zhang L, Ohashi Y, Perisic O, Williams RL, Sachse C

PDB-5l93:
An atomic model of HIV-1 CA-SP1 reveals structures regulating assembly and maturation
Method: subtomogram averaging / : Schur FKM, Obr M, Hagen WJH, Wan W, Arjen JJ, Kirkpatrick JM, Sachse C, Kraeusslich HG, Briggs JAG

PDB-5jm0:
Structure of the S. cerevisiae alpha-mannosidase 1
Method: single particle / : Schneider S, Kosinski J, Jakobi AJ, Hagen WJH, Sachse C

PDB-5jm9:
Structure of S. cerevesiae mApe1 dodecamer
Method: single particle / : Sachse C, Bertipaglia C

PDB-5fj8:
Cryo-EM structure of yeast RNA polymerase III elongation complex at 3. 9 A
Method: single particle / : Hoffmann NA, Jakobi AJ, Moreno-Morcillo M, Glatt S, Kosinski J, Hagen WJ, Sachse C, Muller CW

PDB-5fj9:
Cryo-EM structure of yeast apo RNA polymerase III at 4.6 A
Method: single particle / : Hoffmann NA, Jakobi AJ, Moreno-Morcillo M, Glatt S, Kosinski J, Hagen WJ, Sachse C, Muller CW

PDB-5fja:
Cryo-EM structure of yeast RNA polymerase III at 4.7 A
Method: single particle / : Hoffmann NA, Jakobi AJ, Moreno-Morcillo M, Glatt S, Kosinski J, Hagen WJ, Sachse C, Muller CW

PDB-4uf8:
Electron cryo-microscopy structure of PB1-p62 filaments
Method: helical / : Ciuffa R, Lamark T, Tarafder A, Guesdon A, Rybina S, Hagen WJH, Johansen T, Sachse C

PDB-4uf9:
Electron cryo-microscopy structure of PB1-p62 type T filaments
Method: helical / : Ciuffa R, Lamark T, Tarafder A, Guesdon A, Rybina S, Hagen WJH, Johansen T, Sachse C

PDB-5ahv:
Cryo-EM structure of helical ANTH and ENTH tubules on PI(4,5)P2-containing membranes
Method: single particle / : Skruzny M, Desfosses A, Prinz S, Dodonova SO, Gieras A, Uetrecht C, Jakobi AJ, Abella M, Hagen WJH, Schulz J, Meijers R, Rybin V, Briggs JAG, Sachse C, Kaksonen M

PDB-4uft:
Structure of the helical Measles virus nucleocapsid
Method: single particle / : Gutsche I, Desfosses A, Effantin G, Ling WL, Haupt M, Ruigrok RWH, Sachse C, Schoehn G

PDB-5aey:
actin-like ParM protein bound to AMPPNP
Method: helical / : Bharat TAM, Murshudov GN, Sachse C, Lowe J

PDB-5ai7:
ParM doublet model
Method: helical / : Bharat TAM, Murshudov GN, Sachse C, Lowe J

PDB-4udv:
Cryo-EM structure of TMV at 3.35 A resolution
Method: helical / : Fromm SA, Bharat TAM, Jakobi AJ, Hagen WJH, Sachse C

PDB-4ard:
Structure of the immature retroviral capsid at 8A resolution by cryo- electron microscopy
Method: helical / : Bharat TAM, Davey NE, Ulbrich P, Riches JD, Marco AD, Rumlova M, Sachse C, Ruml T, Briggs JAG

PDB-4arg:
Structure of the immature retroviral capsid at 8A resolution by cryo- electron microscopy
Method: helical / : Bharat TAM, Davey NE, Ulbrich P, Riches JD, Marco AD, Rumlova M, Sachse C, Ruml T, Briggs JAG

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more