[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 107 items for (author: ranson, & n.a.)

PDB-8oh2:
Structure of the Tau-PAM4 Type 1 amyloid fibril
Method: helical / : Wilkinson M, Louros N, Tsaka G, Ramakers M, Morelli C, Garcia T, Gallardo RU, D'Haeyer S, Goossens V, Audenaert D, Thal DR, Ranson NA, Radford SE, Rousseau F, Schymkowitz J

PDB-8ohi:
Structure of the Fmoc-Tau-PAM4 Type 2 amyloid fibril
Method: helical / : Wilkinson M, Louros N, Tsaka G, Ramakers M, Morelli C, Garcia T, Gallardo RU, D'Haeyer S, Goossens V, Audenaert D, Thal DR, Ranson NA, Radford SE, Rousseau F, Schymkowitz J

PDB-8ohp:
Structure of the Fmoc-Tau-PAM4 Type 3 amyloid fibril
Method: helical / : Wilkinson M, Louros N, Tsaka G, Ramakers M, Morelli C, Garcia T, Gallardo RU, D'Haeyer S, Goossens V, Audenaert D, Thal DR, Ranson NA, Radford SE, Rousseau F, Schymkowitz J

PDB-8oi0:
Structure of the Fmoc-Tau-PAM4 Type 4 amyloid fibril
Method: helical / : Wilkinson M, Louros N, Tsaka G, Ramakers M, Morelli C, Garcia T, Gallardo RU, D'Haeyer S, Goossens V, Audenaert D, Thal DR, Ranson NA, Radford SE, Rousseau F, Schymkowitz J

PDB-8awt:
IAPP S20G lag-phase fibril polymorph 2PF-P
Method: helical / : Wilkinson M, Xu Y, Gallardo R, Radford SE, Ranson NA

PDB-8az0:
IAPP S20G growth-phase fibril polymorph 2PF-L
Method: helical / : Wilkinson M, Xu Y, Gallardo R, Radford SE, Ranson NA

PDB-8az1:
IAPP S20G growth-phase fibril polymorph 2PF-C
Method: helical / : Wilkinson M, Xu Y, Gallardo R, Radford SE, Ranson NA

PDB-8az2:
IAPP S20G growth-phase fibril polymorph 3PF-CU
Method: helical / : Wilkinson M, Xu Y, Gallardo R, Radford SE, Ranson NA

PDB-8az3:
IAPP S20G growth-phase fibril polymorph 4PF-CU
Method: helical / : Wilkinson M, Xu Y, Gallardo R, Radford SE, Ranson NA

PDB-8az4:
IAPP S20G plateau-phase fibril polymorph 2PF-L
Method: helical / : Wilkinson M, Xu Y, Gallardo R, Radford SE, Ranson NA

PDB-8az5:
IAPP S20G plateau-phase fibril polymorph 4PF-CU
Method: helical / : Wilkinson M, Xu Y, Gallardo R, Radford SE, Ranson NA

PDB-8az6:
IAPP S20G plateau-phase fibril polymorph 4PF-LU
Method: helical / : Wilkinson M, Xu Y, Gallardo R, Radford SE, Ranson NA

PDB-8az7:
IAPP S20G plateau-phase fibril polymorph 4PF-LJ
Method: helical / : Wilkinson M, Xu Y, Gallardo R, Radford SE, Ranson NA

PDB-8a9y:
Substrate-free levan utilisation machinery (utilisome)
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

PDB-8aa0:
Levan utilisation machinery (utilisome) with levan fructo-oligosaccharides DP 8-12
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

PDB-8aa1:
Core SusCD transporter units from the levan utilisome with levan fructo-oligosaccharides DP 8-12
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

PDB-8aa2:
Inactive levan utilisation machinery (utilisome) in the presence of levan fructo-oligosaccharides DP 15-25
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

PDB-8aa3:
Core SusCD transporter units from the inactive levan utilisome in the presence of levan fructo-oligosaccharides DP 15-25
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

PDB-8aa4:
SusC components of the dextran utilisation system (utilisome)
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

PDB-8bfa:
Sarkosyl-extracted AppNL-G-F Abeta42 fibril structure
Method: helical / : Wilkinson M, Leistner C, Burgess A, Goodfellow S, Deuchars S, Ranson NA, Radford SE, Frank RAW

PDB-8bfb:
Sarkosyl-extracted AppNL-G-F Abeta42 fibril structure (Methoxy-X04-labelled mice)
Method: helical / : Wilkinson M, Leistner C, Burgess A, Goodfellow S, Deuchars S, Ranson NA, Radford SE, Frank RAW

PDB-8bvq:
E. coli BAM complex (BamABCDE) bound to darobactin B
Method: single particle / : Horne JE, Fenn KL, Radford SE, Ranson NA

PDB-8bwc:
E. coli BAM complex (BamABCDE) wild-type
Method: single particle / : Machin JM, Radford SE, Ranson NA

PDB-8a7o:
beta-2-microglobulin DeltaN6 amyloid fibril form 2PFa
Method: helical / : Wilkinson M, Gallardo R, Radford SE, Ranson NA

PDB-8a7p:
beta-2-microglobulin DeltaN6 amyloid fibril form 2PFb
Method: helical / : Wilkinson M, Gallardo R, Radford SE, Ranson NA

PDB-8a7q:
beta-2-microglobulin V27M amyloid fibril form 4PF
Method: helical / : Wilkinson M, Gallardo R, Radford SE, Ranson NA

PDB-8a7t:
beta-2-microglobulin D76N amyloid fibril form 2PFa
Method: helical / : Wilkinson M, Gallardo R, Radford SE, Ranson NA

PDB-7zq8:
VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=4 VLP)
Method: single particle / : Kingston NJ, Grehan K, Snowden JS, Alzahrani J, Ranson NA, Rowlands DJ, Stonehouse NJ

PDB-7zqa:
VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=3* VLP)
Method: single particle / : Kingston NJ, Grehan K, Snowden JS, Alzahrani J, Ranson NA, Rowlands DJ, Stonehouse NJ

PDB-8a3c:
Nudaurelia capensis omega virus maturation intermediate captured at pH5.9 (insect cell expressed VLPs)
Method: single particle / : Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

PDB-8a41:
Nudaurelia capensis omega virus procapsid at pH7.6 (insect cell expressed VLPs)
Method: single particle / : Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

PDB-8a6j:
Nudaurelia capensis omega virus maturation intermediate captured at pH6.25 (insect cell expressed VLPs)
Method: single particle / : Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

PDB-8aay:
Nudaurelia capensis omega virus maturation intermediate captured at pH5.6 (insect cell expressed VLPs): small class from symmetry expansion
Method: single particle / : Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

PDB-8ac6:
Nudaurelia capensis omega virus maturation intermediate captured at pH5.6 (insect cell expressed VLPs): medium class from symmetry expansion
Method: single particle / : Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

PDB-8ach:
Nudaurelia capensis omega virus maturation intermediate captured at pH5.6 (insect cell expressed VLPs): large class from symmetry expansion
Method: single particle / : Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

PDB-7qep:
Cryo-EM structure of the ribosome from Encephalitozoon cuniculi
Method: single particle / : Nicholson D, Ranson NA, Melnikov SV

PDB-7p48:
Staphylococcus aureus ribosome in complex with Sal(B)
Method: single particle / : Nicholson D, Ranson NA, O'Neill AJ

PDB-7abl:
HBV pgRNA T=4 NCP icosahedral symmetry
Method: single particle / : Patel N, Clark S, Weis EU, Mata CP, Bohon J, Farquhar E, Ranson NA, Twarock R, Stockley PG

PDB-7anm:
Nudaurelia capensis omega virus capsid: virus-like particles expressed in Nicotiana benthamiana
Method: single particle / : Castells-Graells R, Ribeiro JRS, Domitrovic T, Hesketh EL, Scarff CA, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

PDB-7ata:
Nudaurelia capensis omega virus procapsid: virus-like particles expressed in Nicotiana benthamiana
Method: single particle / : Castells-Graells R, Ribeiro JRS, Domitrovic T, Hesketh EL, Scarff CA, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

PDB-7og6:
Structure of Alternanthera Mosaic VLP by cryoEM
Method: helical / : Byrne MJ, Ranson NA, Lomonossoff GP, Thuenemann EC

PDB-7bc4:
Cryo-EM structure of fatty acid synthase (FAS) from Pichia pastoris
Method: single particle / : Snowden JS, Alzahrani J, Sherry L, Stacey M, Rowlands DJ, Ranson NA, Stonehouse NJ

PDB-7bc5:
Cryo-EM structure of ACP domain from Pichia pastoris fatty acid synthase (FAS)
Method: single particle / : Snowden JS, Alzahrani J, Sherry L, Stacey M, Rowlands DJ, Ranson NA, Stonehouse NJ

PDB-7ncr:
Cryo-EM structure of Pepper cryptic virus 1 VLP
Method: single particle / : Byrne MJ, Sainsbury F, Ranson NA

PDB-6smx:
BamABCDE in MSP1D1 nanodisc
Method: single particle / : Iadanza MG, Ranson NA, Radford SE, Higgins AJ, Calabrese AN, Schiffrin B, White P

PDB-6sn0:
BamABCDE in MSP1D1 nanodisc ensemble 0-1
Method: single particle / : Iadanza MG, Ranson NA, Radford SE, Higgins AJ, Calabrese AN, Schiffrin B, White P

PDB-6sn2:
BamABCDE in MSP1D1 nanodisc ensemble 0-2
Method: single particle / : Iadanza MG, Ranson NA, Radford SE, Higgins AJ, Calabrese AN, Schiffrin B, White P

PDB-6sn3:
BamABCDE in MSP1D1 nanodisc ensemble 0-3
Method: single particle / : Iadanza MG, Ranson NA, Radford SE, Higgins AJ, Calabrese AN, Schiffrin B, White P

PDB-6sn4:
BamABCDE in MSP1D1 nanodisc ensemble 0-4
Method: single particle / : Iadanza MG, Ranson NA, Radford SE, Higgins AJ, Calabrese AN, Schiffrin B, White P

PDB-6sn5:
BamABCDE in MSP1D1 nanodisc ensemble 0-5
Method: single particle / : Iadanza MG, Ranson NA, Radford SE, Higgins AJ, Calabrese AN, Schiffrin B, White P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more