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Showing 1 - 50 of 550 items for (author: oda & t)

EMDB-19276:
Cryo-EM of tetrameric collagenase-cleaved Xenopus ZP2-N2N3 (cleaved xZP2-N2N3) (C1)
Method: single particle / : Wiseman B, Nishio S, Jovine L

EMDB-19277:
Cryo-EM of tetrameric collagenase-cleaved Xenopus ZP2-N2N3 (cleaved xZP2-N2N3) (C2)
Method: single particle / : Wiseman B, Nishio S, Jovine L

EMDB-36724:
Structure of the SARS-CoV-2 XBB.1.5 spike glycoprotein (closed state 1)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

EMDB-36726:
Structure of the SARS-CoV-2 XBB.1.5 spike glycoprotein (closed state 2)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

EMDB-36727:
Structure of SARS-CoV-2 XBB.1.5 spike glycoprotein in complex with ACE2 (1-up state)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

EMDB-36728:
Structure of SARS-CoV-2 XBB.1.5 spike glycoprotein in complex with ACE2 (2-up state)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

EMDB-36729:
Structure of SARS-CoV-2 XBB.1.5 spike RBD in complex with ACE2
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

EMDB-17241:
C. elegans L1 80S ribosome
Method: subtomogram averaging / : Schioetz OH, Kaiser CJO, Klumpe S, Beck F, Plitzko JM

EMDB-17242:
C. elegans L1 larva 80S ribosome class 1
Method: subtomogram averaging / : Schioetz OH, Kaiser CJO, Klumpe S, Beck F, Plitzko JM

EMDB-17243:
C. elegans L1 larva 80S ribosome class 2
Method: subtomogram averaging / : Schioetz OH, Kaiser CJO, Klumpe S, Beck F, Plitzko JM

EMDB-17244:
C. elegans L1 larva 80S ribosome class 3
Method: subtomogram averaging / : Schioetz OH, Kaiser CJO, Klumpe S, Beck F, Plitzko JM

EMDB-17245:
C. elegans L1 larva 80S ribosome class 4
Method: subtomogram averaging / : Schioetz OH, Kaiser CJO, Klumpe S, Beck F, Plitzko JM

EMDB-17246:
C. elegans L1 larva body wall muscle tomogram
Method: electron tomography / : Schioetz OH, Kaiser CJO, Klumpe S, Beck F, Plitzko JM

EMDB-17247:
C. elegans L1 larva ventral pharyngeal periphery tomogram
Method: electron tomography / : Schioetz OH, Kaiser CJO, Klumpe S, Beck F, Plitzko JM

EMDB-17248:
Tomogram of the nucleus of a C. elegans L1 larva
Method: electron tomography / : Schioetz OH, Kaiser CJO, Klumpe S, Beck F, Plitzko JM

EMDB-18186:
C. elegans L1 larva
Method: electron tomography / : Schioetz OH, Kaiser CJO, Klumpe S, Klebl DP, Schneider J, Beck F, Plitzko JM

EMDB-18187:
Focused refinment of 11-protofilament microtubule from C. elegans
Method: subtomogram averaging / : Schioetz OH, Kaiser CJO, Klumpe S, Klebl DP, Schneider J, Beck F, Plitzko JM

EMDB-35029:
SARS-CoV2 spike protein with ACE2, no ACE2 binding.
Method: single particle / : Kishikawa J, Hirose M, Kato T, Okamoto T

EMDB-35030:
SARS-CoV2 spike protein with ACE2. 1 ACE2 bound form.
Method: single particle / : Kishikawa J, Hirose M, Kato T, Okamoto T

EMDB-35031:
SARS-CoV2 spike protein with ACE2. 2 ACE2 bound form.
Method: single particle / : Kishikawa J, Hirose M, Kato T, Okamoto T

EMDB-35032:
SARS-CoV2 spike protein with ACE2. 3 ACE2 bound form.
Method: single particle / : Kishikawa J, Hirose M, Kato T, Okamoto T

EMDB-35036:
SARS-CoV2 spike protein with ACE2 decoy.no ACE2 decoy binding
Method: single particle / : Kishikawa J, Hirose M, Kato T, Okamoto T

EMDB-35037:
SARS-CoV2 spike protein with ACE2 decoy. 1 ACE2 decoy bound form.
Method: single particle / : Kishikawa J, Hirose M, Kato T, Okamoto T

EMDB-35038:
SARS-CoV2 spike protein with ACE2 decoy. 1 ACE2 decoy bound and 2 RBD up form.
Method: single particle / : Kishikawa J, Hirose M, Kato T, Okamoto T

EMDB-35039:
SARS-CoV2 spike protein with ACE2 decoy. 2 ACE2 decoy bound form.
Method: single particle / : Kishikawa J, Hirose M, Kato T, Okamoto T

EMDB-35040:
SARS-CoV2 spike protein with ACE2 decoy. 3 ACE2 decoy bound form.
Method: single particle / : Kishikawa J, Hirose M, Kato T, Okamoto T

EMDB-36345:
RBD of SARS-CoV2 spike protein with ACE2 decoy
Method: single particle / : Kishikawa J, Hirose M, Kato T, Okamoto T

PDB-8jje:
RBD of SARS-CoV2 spike protein with ACE2 decoy
Method: single particle / : Kishikawa J, Hirose M, Kato T, Okamoto T

EMDB-34741:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-11
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

EMDB-34742:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-11 focused on RBD and NIV-11 interface
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

PDB-8hgl:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-11
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

PDB-8hgm:
Structure of SARS-CoV-2 spike RBD in complex with neutralizing antibody NIV-11
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

EMDB-33785:
Cryo-EM structure of the histamine-bound histamine H4 receptor and Gq complex
Method: single particle / : Im D, Iwata S, Asada H

EMDB-33786:
Cryo-EM structure of the imetit-bound histamine H4 receptor and Gq complex
Method: single particle / : Im D, Iwata S, Asada H

EMDB-36751:
Outward_facing SLC15A4 monomer
Method: single particle / : Zhang SS, Chen XD, Xie M

EMDB-36752:
Outward-facing SLC15A4 dimer
Method: single particle / : Zhang SS, Chen XD, Xie M

EMDB-36753:
SLC15A4_TASL complex
Method: single particle / : Zhang SS, Chen XD, Xie M

PDB-8jzr:
Outward_facing SLC15A4 monomer
Method: single particle / : Zhang SS, Chen XD, Xie M

PDB-8jzs:
Outward-facing SLC15A4 dimer
Method: single particle / : Zhang SS, Chen XD, Xie M

PDB-8jzu:
SLC15A4_TASL complex
Method: single particle / : Zhang SS, Chen XD, Xie M

EMDB-28013:
Cryo-EM structure of the Glutaminase C core filament (fGAC)
Method: single particle / : Ambrosio AL, Dias SM, Quesnay JE, Portugal RV, Cassago A, van Heel MG, Islam Z, Rodrigues CT

PDB-8ec6:
Cryo-EM structure of the Glutaminase C core filament (fGAC)
Method: single particle / : Ambrosio AL, Dias SM, Quesnay JE, Portugal RV, Cassago A, van Heel MG, Islam Z, Rodrigues CT

EMDB-34429:
Cryo-EM structure of KpFtsZ-monobody double helical tube
Method: helical / : Fujita J, Amesaka H, Yoshizawa T, Kuroda N, Kamimura N, Hara M, Inoue T, Namba K, Tanaka S, Matsumura H

PDB-8h1o:
Cryo-EM structure of KpFtsZ-monobody double helical tube
Method: helical / : Fujita J, Amesaka H, Yoshizawa T, Kuroda N, Kamimura N, Hara M, Inoue T, Namba K, Tanaka S, Matsumura H

EMDB-35344:
Cryo-EM structure of KpFtsZ single filament
Method: helical / : Fujita J, Amesaka H, Yoshizawa T, Kuroda N, Kamimura N, Hibino K, Konishi T, Kato Y, Hara M, Inoue T, Namba K, Tanaka S, Matsumura H

PDB-8ibn:
Cryo-EM structure of KpFtsZ single filament
Method: helical / : Fujita J, Amesaka H, Yoshizawa T, Kuroda N, Kamimura N, Hibino K, Konishi T, Kato Y, Hara M, Inoue T, Namba K, Tanaka S, Matsumura H

EMDB-33820:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-8 focused on RBD and NIV-8 interface
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

EMDB-33821:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-8 (state 1)
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

EMDB-33822:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-8 (state 2)
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

EMDB-33823:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-10 focused on RBD and NIV-10 interface
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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