[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 72 items for (author: naiqian & cheng)

EMDB-22331:
SPN3US phage empty capsid
Method: single particle / : Heymann JB, Wang B, Newcomb WW, Wu W, Winkler DC, Cheng N, Reilly ER, Hsia RC, Thomas JA, Steven AC

EMDB-22332:
Phage SPN3US mottled capsid (glutaraldehyde-fixed)
Method: single particle / : Heymann JB, Wang B, Newcomb WW, Wu W, Winkler DC, Cheng N, Reilly ER, Hsia RC, Thomas JA, Steven AC

EMDB-22333:
SPN3US phage mottled capsid
Method: single particle / : Heymann JB, Wang B, Newcomb WW, Wu W, Winkler DC, Cheng N, Reilly ER, Hsia RC, Thomas JA, Steven AC

PDB-6ui6:
HBV T=3 149C3A
Method: single particle / : Wu W, Watts NR, Cheng N, Huang R, Steven A, Wingfield PT

PDB-6ui7:
HBV T=4 149C3A
Method: single particle / : Wu W, Watts NR, Cheng N, Huang R, Steven A, Wingfield PT

EMDB-20669:
HBV T=3 particle
Method: single particle / : Wu W, Watts NR, Cheng N, Huang R, Steven A, Wingfield PT

EMDB-20670:
HBV T=4 particle
Method: single particle / : Wu W

EMDB-4445:
Thermophage P23-45 procapsid asymmetric reconstruction
Method: single particle / : Bayfield OW, Klimuk E, Winkler DC, Hesketh EL, Chechik M, Cheng N, Dykeman EC, Minakhin L, Ranson NA, Severinov K, Steven AC, Antson AA

EMDB-4446:
Thermophage P23-45 empty expanded capsid C5 reconstruction
Method: single particle / : Bayfield OW, Klimuk E, Winkler DC, Hesketh EL, Chechik M, Cheng N, Dykeman EC, Minakhin L, Ranson NA, Severinov K, Steven AC, Antson AA

EMDB-4447:
Thermophage P23-45 procapsid icosahedral reconstruction
Method: single particle / : Bayfield OW, Klimuk E, Winkler DC, Hesketh EL, Chechik M, Cheng N, Dykeman EC, Minakhin L, Ranson NA, Severinov K, Steven AC, Antson AA

PDB-6ibc:
Thermophage P23-45 procapsid
Method: single particle / : Bayfield OW, Klimuk E, Winkler DC, Hesketh EL, Chechik M, Cheng N, Dykeman EC, Minakhin L, Ranson NA, Severinov K, Steven AC, Antson AA

EMDB-4433:
Thermophage P23-45 empty expanded capsid icosahedral reconstruction
Method: single particle / : Bayfield OW, Klimuk E, Winkler DC, Hesketh EL, Chechik M, Cheng N, Dykeman EC, Minakhin L, Ranson NA, Severinov K, Steven AC, Antson AA

PDB-6i9e:
Thermophage P23-45 empty expanded capsid
Method: single particle / : Bayfield OW, Klimuk E, Winkler DC, Hesketh EL, Chechik M, Cheng N, Dykeman EC, Minakhin L, Ranson NA, Severinov K, Steven AC, Antson AA

EMDB-8607:
Herpes Simplex Virion Primary Enveloped Virion
Method: single particle / : Fontana J, Newcomb WW, Winkler DC, Cheng N, Heymann JB, Steven AC

EMDB-8258:
Reconstructions of P22 gp20 minus particles: low dose
Method: single particle / : Wu W, Leavitt JC

EMDB-8259:
Reconstructions of P22 gp20 minus particles: 7th exposure
Method: single particle / : Wu W, Leavitt JC

EMDB-8260:
Reconstructions of P22 gp20 minus particles: 8th exposure
Method: single particle / : Wu W, Leavitt JC

EMDB-8261:
Reconstructions of P22 gp20 minus particles: 9th exposure
Method: single particle / : Wu W, Leavitt JC

EMDB-6439:
Helical cryo-EM reconstruction of HIV Rev filament
Method: helical / : DiMattia MA, Watts NR, Cheng N, Huang R, Heymann JB, Wingfield PT, Grimes JM, Stuart DI, Steven AC

EMDB-3358:
HSV bubblegram imaging
Method: single particle / : Wu W, Newcomb WW, Cheng N, Aksyuk A, Winkler DC, Steven AC

EMDB-3359:
HSV bubblegram imaging
Method: single particle / : Wu W, Newcomb WW, Cheng N, Aksyuk A, Winkler DC, Steven AC

EMDB-3360:
HSV bubblegram imaging
Method: single particle / : Wu W, Newcomb WW, Cheng N, Aksyuk A, Winkler DC, Steven AC

EMDB-3361:
HSV bubblegram imaging
Method: single particle / : Wu W, Newcomb WW, Cheng N, Aksyuk A, Winkler DC, Steven AC

EMDB-3288:
HSV bubblegram imaging
Method: single particle / : Wu W, Newcomb WW, Cheng N, Aksyuk A, Winkler DC, Steven AC

EMDB-6482:
Cryo-electron microscopy of alpha Synuclein amyloid fibrils
Method: helical / : Dearborn AD, Wall JS, Cheng N, Heymann JB, Kajava AV, Varkey J, Langen R, Steven AC

PDB-3j8f:
Cryo-EM reconstruction of poliovirus-receptor complex
Method: single particle / : Strauss M, Filman DJ, Belnap DM, Cheng N, Noel RT, Hogle JM

PDB-3j9f:
Poliovirus complexed with soluble, deglycosylated poliovirus receptor (Pvr) at 4 degrees C
Method: single particle / : Strauss M, Filman DJ, Belnap DM, Cheng N, Noel RT, Hogle JM

EMDB-6147:
Cryo-EM reconstruction of poliovirus-receptor complex
Method: single particle / : Strauss M, Filman DJ, Cheng N, Noel RT, Belnap DM, Hogle JM

EMDB-6148:
Cryo-EM reconstruction of poliovirus-receptor complex
Method: single particle / : Strauss M, Filman DJ, Cheng N, Noel RT, Belnap DM, Hogle JM

EMDB-6242:
Poliovirus complexed with soluble, glycosylated poliovirus receptor (Pvr) at 4 degrees C
Method: single particle / : Strauss M, Filman DJ, Belnap DM, Cheng N, Noel RT, Hogle JM

EMDB-6243:
Poliovirus complexed with soluble, deglycosylated poliovirus receptor (Pvr) at 4 degrees C
Method: single particle / : Strauss M, Filman DJ, Belnap DM, Cheng N, Noel RT, Hogle JM

EMDB-5917:
Encapsulin protein (EncA) from Myxococcus xanthus
Method: single particle / : McHugh CA, Fontana J, Lam AS, Cheng N, Aksyuk AA, Steven AC, Hoiczyk E

EMDB-5953:
Cryo-electron microscopy of iron-core lacking encapsulin nanocompartments from Myxococcus xanthus
Method: single particle / : McHugh CA, Fontana J, Nemecek D, Cheng N, Aksyuk AA, Heymann JB, Winkler DC, Lam AS, Wall JS, Steven AC, Hoiczyk E

PDB-4pt2:
Myxococcus xanthus encapsulin protein (EncA)
Method: single particle / : Fontana J, Aksyuk AA, Steven AC, Hoiczyk E

EMDB-5932:
Electron cryo-microscopy of Human Papillomavirus Type 16 Capsid
Method: single particle / : Cardone G, Moyer AL, Cheng N, Thompson CD, Dvoretzky I, Lowy DR, Schiller JT, Steven AC, Buck CB, Trus BL

PDB-3j6r:
Electron cryo-microscopy of Human Papillomavirus Type 16 capsid
Method: single particle / : Cardone G, Moyer AL, Cheng N, Thompson CD, Dvoretzky I, Lowy DR, Schiller JT, Steven AC, Buck CB, Trus BL

PDB-4btq:
Coordinates of the bacteriophage phi6 capsid subunits fitted into the cryoEM map EMD-1206
Method: single particle / : Nemecek D, Boura E, Wu W, Cheng N, Plevka P, Qiao J, Mindich L, Heymann JB, Hurley JH, Steven AC

EMDB-5772:
A Two-Pronged Structural Analysis of Retroviral Maturation Indicates that Core Formation Proceeds by a Disassembly-Reassembly Pathway Rather than a Displacive Transition
Method: single particle / : Keller PW, Huang RK, England M, Waki K, Cheng N, Heymann JB, Craven RC, Freed EO, Steven AC

EMDB-5773:
A Two-Pronged Structural Analysis of Retroviral Maturation Indicates that Core Formation Proceeds by a Disassembly-Reassembly Pathway Rather than a Displacive Transition
Method: single particle / : Keller PW, Huang RK, England M, Waki K, Cheng N, Heymann JB, Craven RC, Freed EO, Steven AC

EMDB-5774:
A Two-Pronged Structural Analysis of Retroviral Maturation Indicates that Core Formation Proceeds by a Disassembly-Reassembly Pathway Rather than a Displacive Transition
Method: single particle / : Keller PW, Huang RK, England M, Waki K, Cheng N, Heymann JB, Craven RC, Freed EO, Steven AC

EMDB-2364:
CryoEM reconstruction of the bacteriophage phi6 procapsid to the near-atomic resolution
Method: single particle / : Nemecek D, Boura E, Wu W, Cheng N, Plevka P, Qiao J, Mindich L, Heymann JB, Hurley JH, Steven AC

PDB-4btg:
Coordinates of the bacteriophage phi6 capsid subunits (P1A and P1B) fitted into the cryoEM reconstruction of the procapsid at 4.4 A resolution
Method: single particle / : Nemecek D, Boura E, Wu W, Cheng N, Plevka P, Qiao J, Mindich L, Heymann JB, Hurley JH, Steven AC

PDB-3j3o:
Conformational Shift of a Major Poliovirus Antigen Confirmed by Immuno-Cryogenic Electron Microscopy: 160S Poliovirus and C3-Fab Complex
Method: single particle / : Lin J, Cheng N, Hogle JM, Steven AC, Belnap DM

PDB-3j3p:
Conformational Shift of a Major Poliovirus Antigen Confirmed by Immuno-Cryogenic Electron Microscopy: 135S Poliovirus and C3-Fab Complex
Method: single particle / : Lin J, Cheng N, Hogle JM, Steven AC, Belnap DM

EMDB-5291:
Poliovirus 160S particle and C3 Fab complex at 11.1 Angstrom resolution
Method: single particle / : Lin J, Cheng N, Hogle JM, Steven AC, Belnap DM

EMDB-5292:
Poliovirus 135S particle and C3 Fab complex at 9.1 Angstrom resolution
Method: single particle / : Lin J, Cheng N, Hogle JM, Steven AC, Belnap DM

EMDB-5293:
Poliovirus 80S particle and C3 Fab complex at 22 Angstrom resolution
Method: single particle / : Lin J, Cheng N, Hogle JM, Steven AC, Belnap DM

EMDB-5355:
Expansion Intermediates of the Bacteriophage phi6 Procapsid
Method: single particle / : Nemecek D, Cheng N, Qiao J, Mindich L, Steven AC, Heymann JB

EMDB-5356:
Expansion Intermediates of the Bacteriophage phi6 Procapsid
Method: single particle / : Nemecek D, Cheng N, Qiao J, Mindich L, Steven AC, Heymann JB

EMDB-5357:
Expansion Intermediates of the Bacteriophage phi6 Procapsid
Method: single particle / : Nemecek D, Cheng N, Qiao J, Mindich L, Steven AC, Heymann JB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more