[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 247 items for (author: n. & cheng)

PDB-8twv:
ELIC5 with Propylamine in spNW15 nanodiscs with 2:1:1 POPC:POPE:POPG
Method: single particle / : Dalal V, Arcario MJ, Petroff II JT, Deitzen NM, Tan BK, Brannigan G, Cheng WWL

PDB-8twz:
ELIC with Propylamine in spNW15 nanodiscs with 2:1:1 POPC:POPE:POPG
Method: single particle / : Dalal V, Arcario MJ, Petroff II JT, Deitzen NM, Tan BK, Brannigan G, Cheng WWL

PDB-8ka8:
Cryo-EM structure of SARS-CoV-2 Delta RBD in complex with golden hamster ACE2 (local refinement)
Method: single particle / : Niu S, Zhao ZN, Chai Y, Gao GF

PDB-8kc2:
Cryo-EM structure of SARS-CoV-2 BA.3 RBD in complex with golden hamster ACE2 (local refinement)
Method: single particle / : Niu S, Zhao ZN, Chai Y, Gao GF

PDB-8w8q:
Cryo-EM structure of the GPR101-Gs complex
Method: single particle / : Sun JP, Gao N, Yu X, Wang GP, Yang F, Wang JY, Yang Z, Guan Y

PDB-8w8r:
Cryo-EM structure of the AA-14-bound GPR101-Gs complex
Method: single particle / : Sun JP, Yu X, Gao N, Yang F, Wang JY, Yang Z, Guan Y, Wang GP

PDB-8w8s:
Cryo-EM structure of the AA14-bound GPR101 complex
Method: single particle / : Sun JP, Yu X, Gao N, Yang F, Wang JY, Yang Z, Guan Y, Wang GP

PDB-8wc3:
Cryo-EM structure of the SEP363856-bound mTAAR1-Gs complex
Method: single particle / : Rong NK, Guo LL, Zhang MH, Li Q, Yang F, Sun JP

PDB-8wc4:
Cryo-EM structure of the ZH8651-bound mTAAR1-Gs complex
Method: single particle / : Rong NK, Guo LL, Zhang MH, Li Q, Yang F, Sun JP

PDB-8wc5:
Cryo-EM structure of the TMA-bound mTAAR1-Gs complex
Method: single particle / : Rong NK, Guo LL, Zhang MH, Li Q, Yang F, Sun JP

PDB-8wc6:
Cryo-EM structure of the PEA-bound mTAAR1-Gs complex
Method: single particle / : Rong NK, Guo LL, Zhang MH, Li Q, Yang F, Sun JP

PDB-8wc7:
Cryo-EM structure of the ZH8667-bound mTAAR1-Gs complex
Method: single particle / : Rong NK, Guo LL, Zhang MH, Li Q, Yang F, Sun JP

PDB-8wc8:
Cryo-EM structure of the ZH8651-bound hTAAR1-Gs complex
Method: single particle / : Rong NK, Guo LL, Zhang MH, Li Q, Yang F, Sun JP

PDB-8wc9:
Cryo-EM structure of the ZH8651-bound mTAAR1-Gq complex
Method: single particle / : Rong NK, Guo LL, Zhang MH, Li Q, Yang F, Sun JP

PDB-8wca:
Cryo-EM structure of the PEA-bound hTAAR1-Gs complex
Method: single particle / : Rong NK, Guo LL, Zhang MH, Li Q, Yang F, Sun JP

PDB-8wcb:
Cryo-EM structure of the CHA-bound mTAAR1-Gq complex
Method: single particle / : Rong NK, Guo LL, Zhang MH, Li Q, Yang F, Sun JP

PDB-8wcc:
Cryo-EM structure of the CHA-bound mTAAR1 complex
Method: single particle / : Rong NK, Guo LL, Zhang MH, Li Q, Yang F, Sun JP

PDB-8hri:
SARS-CoV-2 Delta variant spike protein
Method: single particle / : Xu J, Cheng H, Liu N, Wang HW

PDB-8hrj:
SARS-CoV-2 Delta variant spike protein
Method: single particle / : Xu J, Cheng H, Liu N, Wang HW

PDB-8fli:
Cryo-EM structure of a group II intron immediately before branching
Method: single particle / : Haack DB, Rudolfs BG, Zhang C, Lyumkis D, Toor N

PDB-8f32:
ELIC with Propylamine in SMA nanodiscs with 2:1:1 POPC:POPE:POPG
Method: single particle / : Dalal V, Arcario MJ, Petroff II JT, Deitzen NM, Tan BK, Brannigan G, Cheng WWL

PDB-8f33:
ELIC with Propylamine in saposin nanodiscs with 2:1:1 POPC:POPE:POPG
Method: single particle / : Dalal V, Arcario MJ, Petroff II JT, Deitzen NM, Tan BK, Brannigan G, Cheng WWL

PDB-8f34:
ELIC with Propylamine in spMSP1D1 nanodiscs with 2:1:1 POPC:POPE:POPG
Method: single particle / : Dalal V, Arcario MJ, Petroff II JT, Deitzen NM, Tan BK, Brannigan G, Cheng WWL

PDB-8f35:
Apo ELIC in spMSP1D1 nanodiscs with 2:1:1 POPC:POPE:POPG
Method: single particle / : Dalal V, Arcario MJ, Petroff II JT, Deitzen NM, Tan BK, Brannigan G, Cheng WWL

PDB-8p2l:
A CHIMERA construct containing human SARM1 ARM and SAM domains and C. elegans TIR domain.
Method: single particle / : Isupov MN, Opatowsky Y

PDB-8p2m:
C. elegans TIR-1 protein.
Method: single particle / : Isupov MN, Opatowsky Y

PDB-8iv4:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and 3E2 (local refinement)
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

PDB-8iv5:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and 1C4 (local refinement)
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

PDB-8iv8:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 3E2 and 1C4 (local refinement)
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

PDB-8iva:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs XMA01 and 3E2 (local refinement)
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

PDB-8imz:
Cryo-EM structure of mouse Piezo1-MDFIC complex (composite map)
Method: single particle / : Zhou Z, Ma X, Lin Y, Cheng D, Bavi N, Li JV, Sutton D, Yao M, Harvey N, Corry B, Zhang Y, Cox CD

PDB-8idt:
human nuclear pre-60S ribosomal particle - State G
Method: single particle / : Zhang Y, Gao N

PDB-8idy:
human nuclear pre-60S ribosomal particle - State F
Method: single particle / : Zhang Y, Gao N

PDB-8ie3:
human nuclear pre-60S ribosomal particle - State E
Method: single particle / : Zhang Y, Gao N

PDB-8ine:
human nuclear pre-60S ribosomal particle - State G'
Method: single particle / : Zhang Y, Gao N

PDB-8inf:
human nuclear pre-60S ribosomal particle - State F'
Method: single particle / : Zhang Y, Gao N

PDB-8ink:
human nuclear pre-60S ribosomal particle - State D
Method: single particle / : Zhang Y, Gao N

PDB-8ipd:
human nuclear pre-60S ribosomal particle - State C
Method: single particle / : Zhang Y, Gao N

PDB-8ipx:
human nuclear pre-60S ribosomal particle - State C'
Method: single particle / : Zhang Y, Gao N

PDB-8ipy:
human nuclear pre-60S ribosomal particle - State D'
Method: single particle / : Zhang Y, Gao N

PDB-8ir1:
human nuclear pre-60S ribosomal particle - State A
Method: single particle / : Zhang Y, Gao N

PDB-8ir3:
human nuclear pre-60S ribosomal particle - State B'
Method: single particle / : Zhang Y, Gao N

PDB-8isi:
Photochromobilin-free form of Arabidopsis thaliana phytochrome A - apo-AtphyA
Method: single particle / : Zhang Y, Ma C, Zhao J, Gao N, Wang J

PDB-8isj:
Pr conformer of Arabidopsis thaliana phytochrome A - AtphyA-Pr
Method: single particle / : Zhang Y, Ma C, Zhao J, Gao N, Wang J

PDB-8isk:
Pr conformer of Zea mays phytochrome A1 - ZmphyA1-Pr
Method: single particle / : Zhang Y, Ma C, Zhao J, Gao N, Wang J

PDB-7y71:
SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7
Method: single particle / : Chia WN, Tan CW, Tan AWK, Young B, Starr TN, Lopez E, Fibriansah G, Barr J, Cheng S, Yeoh AYY, Yap WC, Lim BL, Ng TS, Sia WR, Zhu F, Chen S, Zhang J, Greaney AJ, Chen M, Au GG, Paradkar P, Peiris M, Chung AW, Bloom JD, Lye D, Lok SM, Wang LF

PDB-7y72:
SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7 (focused refinement on Fab-RBD interface)
Method: single particle / : Chia WN, Tan CW, Tan AWK, Young B, Starr TN, Lopez E, Fibriansah G, Barr J, Cheng S, Yeoh AYY, Yap WC, Lim BL, Ng TS, Sia WR, Zhu F, Chen S, Zhang J, Greaney AJ, Chen M, Au GG, Paradkar P, Peiris M, Chung AW, Bloom JD, Lye D, Lok SM, Wang LF

PDB-8jng:
Methanesulfonate monooxygenase ferredoxin subunit of PBS-PSII-PSI-LHCs from Porphyridium purpureum.
Method: single particle / : You X, Zhang X, Cheng J, Xiao YN, Sun S, Sui SF

PDB-8jnl:
Psb34 from red algal Porphyridium purpureum.
Method: single particle / : You X, Zhang X, Cheng J, Xiao YN, Sun S, Sui SF

PDB-8jnm:
PsbW from red algal Porphyridium purpureum.
Method: single particle / : You X, Zhang X, Cheng J, Xiao YN, Sun S, Sui SF

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more