[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 128 items for (author: michael & g. & rossmann)

PDB-8h2i:
Near-atomic structure of five-fold averaged PBCV-1 capsid
Method: single particle / : Shao Q, Agarkova IV, Noel EA, Dunigan DD, Liu Y, Wang A, Guo M, Xie L, Zhao X, Rossmann MG, Van Etten JL, Klose T, Fang Q

PDB-7vrt:
The unexpanded head structure of phage T4
Method: single particle / : Fang Q, Tang W, Fokine A, Mahalingam M, Shao Q, Rossmann MG, Rao VB

PDB-7vs5:
The expanded head structure of phage T4
Method: single particle / : Fang Q, Tang W, Fokine A, Mahalingam M, Shao Q, Rossmann MG, Rao VB

PDB-7kcr:
Cryo-EM structure of Zika virus in complex with E protein cross-linking human monoclonal antibody ADI30056
Method: single particle / : Sevvana M, Rogers TF, Miller AS, Long F, Klose T, Beutler N, Lai YC, Parren M, Walker LM, Buda G, Burton DR, Rossmann MG, Kuhn RJ

PDB-6wds:
Enterovirus D68 in complex with human monoclonal antibody EV68-159
Method: single particle / : Fu J, Klose T, Vogt MR, Crowe JE, Rossmann MG, Kuhn RJ, Center for Structural Genomics of Infectious Diseases (CSGID)

PDB-6wdt:
Enterovirus D68 in complex with human monoclonal antibody EV68-228
Method: single particle / : Fu J, Vogt MR, Klose T, Crowe JE, Rossmann MG, Kuhn RJ, Center for Structural Genomics of Infectious Diseases (CSGID)

PDB-6odf:
EEEV glycoproteins bound with heparan sulfate
Method: single particle / : Rossmann MG, Chen CL

PDB-6cv1:
CryoEM structure of human enterovirus D68 full particle (after incubation with heparin-derived hexasaccharide)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cv2:
CryoEM structure of human enterovirus D68 full virion
Method: single particle / : Liu Y, Rossmann MG

PDB-6cv3:
CryoEM structure of human enterovirus D68 emptied particle
Method: single particle / : Liu Y, Rossmann MG

PDB-6cv4:
CryoEM structure of human enterovirus D68 emptied particle (after incubation with low molecular weight heparin)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cv5:
CryoEM structure of human enterovirus D68 full particle (after incubation with low molecular weight heparin)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cvb:
CryoEM structure of human enterovirus D68 in complex with 6'-sialyl-N-acetyllactosamine
Method: single particle / : Liu Y, Rossmann MG

PDB-6nqd:
Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 Fab
Method: single particle / : Fang Q, Rossmann MG

PDB-6nn3:
Structure of parvovirus B19 decorated with Fab molecules from a human antibody
Method: single particle / : Rossmann MG, Sun Y, Klose T, Liu Y

PDB-6ncl:
Near-atomic structure of icosahedrally averaged PBCV-1 capsid
Method: single particle / : Fang Q, Rossmann MG

PDB-6mid:
Cryo-EM structure of the ZIKV virion in complex with Fab fragments of the potently neutralizing human monoclonal antibody ZIKV-195
Method: single particle / : Long F, Rossmann MG

PDB-6mui:
CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-42 antibody
Method: single particle / : Hasan SS, Sun C, Kim AS, Watanabe Y, Chen CL, Klose T, Buda G, Crispin M, Diamond MS, Klimstra WB, Rossmann MG

PDB-6mw9:
CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-3 antibody
Method: single particle / : Hasan SS, Sun C, Kim AS, Watanabe Y, Chen CL, Klose T, Buda G, Crispin M, Diamond MS, Klimstra WB, Rossmann MG

PDB-6mwc:
CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-5 antibody
Method: single particle / : Hasan SS, Sun C, Kim AS, Watanabe Y, Chen CL, Klose T, Buda G, Crispin M, Diamond MS, Klimstra WB, Rossmann MG

PDB-6mwv:
CryoEM structure of Chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-58 Antibody
Method: single particle / : Hasan SS, Sun C, Kim AS, Watanabe Y, Chen CL, Klose T, Buda G, Crispin M, Diamond MS, Klimstra WB, Rossmann MG

PDB-6mwx:
CryoEM structure of Chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-69 Antibody
Method: single particle / : Hasan SS, Sun C, Kim AS, Watanabe Y, Chen CL, Klose T, Buda G, Crispin M, Diamond MS, Klimstra WB, Rossmann MG

PDB-6mx4:
CryoEM structure of chimeric Eastern Equine Encephalitis Virus
Method: single particle / : Hasan SS, Sun C, Kim AS, Watanabe Y, Chen CL, Klose T, Buda G, Crispin M, Diamond MS, Klimstra WB, Rossmann MG

PDB-6mx7:
CryoEM structure of chimeric Eastern Equine Encephalitis Virus: Genome-Binding Capsid N-terminal Domain
Method: single particle / : Hasan SS, Sun C, Kim AS, Watanabe Y, Chen CL, Klose T, Buda G, Crispin M, Diamond MS, Klimstra WB, Rossmann MG

PDB-6crp:
CryoEM structure of human enterovirus D68 abortive product 1 (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6crr:
CryoEM structure of human enterovirus D68 full native virion (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6crs:
CryoEM structure of human enterovirus D68 A-particle (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cru:
CryoEM structure of human enterovirus D68 emptied particle (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cs3:
CryoEM structure of human enterovirus D68 expanded 1 particle (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cs4:
CryoEM structure of human enterovirus D68 A-particle (pH 5.5 and 33 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cs5:
CryoEM structure of human enterovirus D68 abortive product 2 (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cs6:
CryoEM structure of human enterovirus D68 A-particle (pH 5.5 and room temperature)
Method: single particle / : Liu Y, Rossmann MG

PDB-6csa:
CryoEM structure of human enterovirus D68 emptied particle (pH 5.5 and room temperature)
Method: single particle / : Liu Y, Rossmann MG

PDB-6csg:
CryoEM structure of human enterovirus D68 full native virion
Method: single particle / : Liu Y, Rossmann MG

PDB-6csh:
CryoEM structure of human enterovirus D68 emptied particle (pH 5.5 and 33 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6mzi:
CryoEM structure of human enterovirus D68 expanded 1 particle (pH 6.5, 4 degrees Celsius, 3 min)
Method: single particle / : Liu Y, Rossmann MG

PDB-6co8:
Structure of Zika virus at a resolution of 3.1 Angstrom
Method: single particle / : Sevvana M, Long F, Miller AJ, Klose T, Buda G, Sun L, Kuhn RJ, Rossmann MR

PDB-5wk1:
Structure of the major capsid protein and the capsid stabilizing protein of the marine siphovirus TW1
Method: single particle / : Wang Z, Rossmann MG

PDB-5vu2:
Electron cryo-microscopy of "immature" Chikungunya VLP
Method: single particle / : Rossmann MG, Yap ML

PDB-5vf3:
Bacteriophage T4 isometric capsid
Method: single particle / : Chen Z, Sun L, Zhang Z, Fokine A, Padilla-Sanchez V, Hanein D, Jiang W, Rossmann MG, Rao VB

PDB-5w3e:
CryoEM structure of rhinovirus B14 in complex with C5 Fab (33 degrees Celsius, molar ratio 1:3, full particle)
Method: single particle / : Liu Y, Dong Y, Rossmann MG

PDB-5w3l:
CryoEM structure of rhinovirus B14 in complex with C5 Fab (4 degrees Celsius, molar ratio 1:3, full particle)
Method: single particle / : Liu Y, Dong Y, Rossmann MG

PDB-5w3m:
CryoEM structure of rhinovirus B14 in complex with C5 Fab (33 degrees Celsius, molar ratio 1:1, full particle)
Method: single particle / : Liu Y, Dong Y, Rossmann MG

PDB-5w3o:
CryoEM structure of rhinovirus B14 in complex with C5 Fab (33 degrees Celsius, molar ratio 1:3, empty particle)
Method: single particle / : Liu Y, Dong Y, Rossmann MG

PDB-5khc:
Structure of rubella virus E1 glycoprotein ectodomain fitted into sub-tomogram averaged surface spike density of rubella virus
Method: subtomogram averaging / : Mangala Prasad V, Klose T, Rossmann MG

PDB-5khe:
Fitted structure of rubella virus capsid protein
Method: subtomogram averaging / : Mangala Prasad V, Klose T, Rossmann MG

PDB-5khf:
Fitted structure of rubella virus capsid protein
Method: subtomogram averaging / : Mangala Prasad V, Klose T, Rossmann MG

PDB-5uhy:
A Human Antibody Against Zika Virus Crosslinks the E Protein to Prevent Infection
Method: single particle / : Hasan SS, Miller A, Sapparapu G, Fernandez E, Klose T, Long F, Fokine A, Porta JC, Jiang W, Diamond MS, Crowe Jr JE, Kuhn RJ, Rossmann MG

PDB-5u4w:
Cryo-EM Structure of Immature Zika Virus
Method: single particle / : Mangala Prasad V, Miller AS, Klose T, Sirohi D, Buda G, Jiang W, Kuhn RJ, Rossmann MG

PDB-5jzg:
CryoEM structure of the native empty particle of a human rhinovirus C
Method: single particle / : Liu Y, Hill MG, Klose T, Chen Z, Watters KE, Jiang W, Palmenberg AC, Rossmann MG

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more