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Showing 1 - 50 of 82 items for (author: maeda & k)

EMDB-34742:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-11 focused on RBD and NIV-11 interface
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

PDB-8hgl:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-11
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

PDB-8hgm:
Structure of SARS-CoV-2 spike RBD in complex with neutralizing antibody NIV-11
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

EMDB-33820:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-8 focused on RBD and NIV-8 interface
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

EMDB-33823:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-10 focused on RBD and NIV-10 interface
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

EMDB-33827:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-13 focused on RBD and NIV-13 interface
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

PDB-7yh6:
Structure of SARS-CoV-2 spike RBD in complex with neutralizing antibody NIV-8
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

PDB-7yh7:
SARS-CoV-2 spike in complex with neutralizing antibody NIV-8 (state 2)
Method: single particle / : Moriyama S, Anraku Y, Muranishi S, Adachi Y, Kuroda D, Higuchi Y, Kotaki R, Tonouchi K, Yumoto K, Suzuki T, Kita S, Fukuhara H, Kuroda Y, Yamamoto T, Onodera T, Fukushi S, Maeda K, Nakamura-Uchiyama F, Hashiguchi T, Hoshino A, Maenaka K, Takahashi Y

EMDB-25748:
Cryo-EM structure of ACh-bound M2R-Go signaling complex in S1 state
Method: single particle / : Xu J, Wang Q, Du Y, Kobilka BK

EMDB-25749:
Cryo-EM structure of ACh-bound M2R-Go signaling complex in S2 state
Method: single particle / : Xu J, Wang Q, Du Y, Kobilka BK

EMDB-25751:
Cryo-EM structure of S1 state ACh-bound M2R-Go signaling complex with a PAM
Method: single particle / : Xu J, Wang Q, Du Y, Kobilka BK

EMDB-25752:
Cryo-EM structure of S2 state ACh-bound M2R-Go signaling complex with a PAM
Method: single particle / : Xu J, Wang Q, Du Y, Kobilka BK

PDB-7t8x:
Cryo-EM structure of ACh-bound M2R-Go signaling complex in S1 state
Method: single particle / : Xu J, Wang Q, Du Y, Kobilka BK

PDB-7t90:
Cryo-EM structure of ACh-bound M2R-Go signaling complex in S2 state
Method: single particle / : Xu J, Wang Q, Du Y, Kobilka BK

PDB-7t94:
Cryo-EM structure of S1 state ACh-bound M2R-Go signaling complex with a PAM
Method: single particle / : Xu J, Wang Q, Du Y, Kobilka BK

PDB-7t96:
Cryo-EM structure of S2 state ACh-bound M2R-Go signaling complex with a PAM
Method: single particle / : Xu J, Wang Q, Du Y, Kobilka BK

EMDB-25706:
Cryo-EM structure of human SIMC1-SLF2 complex
Method: single particle / : Maeda S, Oravcova M, Boddy MN, Otomo T

PDB-7t5p:
Cryo-EM structure of human SIMC1-SLF2 complex
Method: single particle / : Maeda S, Oravcova M, Boddy MN, Otomo T

EMDB-25446:
Cryo-EM structure of Arabidopsis Ago10-guide RNA complex
Method: single particle / : Xiao Y, MacRae IJ

EMDB-25482:
Cryo-EM structure of Arabidopsis Ago10-guide-target RNA complex in a bent duplex conformation
Method: single particle / : Xiao Y, MacRae IJ

PDB-7sva:
Cryo-EM structure of Arabidopsis Ago10-guide RNA complex
Method: single particle / : Xiao Y, MacRae IJ

PDB-7swq:
Cryo-EM structure of Arabidopsis Ago10-guide-target RNA complex in a bent duplex conformation
Method: single particle / : Xiao Y, MacRae IJ

EMDB-32078:
Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P86
Method: single particle / : Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A

EMDB-32079:
Cryo-EM structure of the SARS-CoV-2 spike protein (3-up RBD) bound to neutralizing nanobodies P86
Method: single particle / : Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A

EMDB-32080:
Cryo-EM structure of the SARS-CoV-2 spike protein (1-up RBD) bound to neutralizing nanobodies P17
Method: single particle / : Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A

EMDB-32081:
Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P17
Method: single particle / : Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A

PDB-7vq0:
Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P86
Method: single particle / : Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A

EMDB-24496:
Structure of CX3CL1-US28-G11iN18-scFv16 in TL-state
Method: single particle / : Tsutsumi N, Maeda S, Qu Q, Skiniotis G, Kobilka BK, Garcia KC

EMDB-24500:
Structure of CX3CL1-US28-Gi-scFv16 in C-state
Method: single particle / : Tsutsumi N, Qu Q, Jude KM, Skiniotis G, Garcia KC

EMDB-24501:
Structure of CX3CL1-US28-Gi-scFv16 in OC-state
Method: single particle / : Tsutsumi N, Qu Q, Jude KM, Skiniotis G, Garcia KC

EMDB-24506:
Structure of US27-Gi-scFv16 in CL-state
Method: single particle / : Tsutsumi N, Jude KM, Garcia KC

EMDB-24507:
Binding mode of US27-Gi-scFv16 in OCL-state
Method: single particle / : Tsutsumi N, Jude KM, Garcia KC

PDB-7rkf:
Structure of CX3CL1-US28-G11iN18-scFv16 in TL-state
Method: single particle / : Tsutsumi N, Maeda S, Qu Q, Skiniotis G, Kobilka BK, Garcia KC

EMDB-22338:
Structure of the Epstein-Barr virus GPCR BILF1 in complex with human Gi
Method: single particle / : Tsutsumi N, Qu QH, Skiniotis G, Garcia KC

PDB-7jhj:
Structure of the Epstein-Barr virus GPCR BILF1 in complex with human Gi
Method: single particle / : Tsutsumi N, Qu QH, Skiniotis G, Garcia KC

EMDB-30420:
Structure of the far-red light utilizing photosystem I of Acaryochloris marina
Method: single particle / : Kawakami K, Yonekura K, Hamaguchi T, Kashino Y, Shinzawa-Itoh K, Inoue-Kashino N, Itoh S, Ifuku K, Yamashita E

PDB-7coy:
Structure of the far-red light utilizing photosystem I of Acaryochloris marina
Method: single particle / : Kawakami K, Yonekura K, Hamaguchi T, Kashino Y, Shinzawa-Itoh K, Inoue-Kashino N, Itoh S, Ifuku K, Yamashita E

EMDB-22375:
Cryo-EM structure of human ATG9A in amphipols
Method: single particle / : Maeda S, Otomo T

EMDB-22376:
cryo-EM structure of human ATG9A in nanodiscs
Method: single particle / : Maeda S, Otomo T

EMDB-22377:
cryo-EM structure of human ATG9A in LMNG micelles
Method: single particle / : Maeda S, Otomo T

PDB-7jlo:
Cryo-EM structure of human ATG9A in amphipols
Method: single particle / : Maeda S, Otomo T

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

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