[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 48 items for (author: luisi & bf)

EMDB-16647:
Cryo-EM structure of RNase J from Helicobacter pylori
Method: single particle / : Lulla A, Luisi BF

EMDB-16264:
Cryo-EM structure of the Hfq-Crc-amiE translation repression assembly.
Method: single particle / : Dendooven T, Luisi BF

EMDB-16265:
Hfq-Crc-estA translation repression complex
Method: single particle / : Dendooven T, Luisi BF

EMDB-16266:
Cryo-EM structure of Hfq-Crc-rbsB translation repression complex
Method: single particle / : Dendooven T, Luisi BF

EMDB-15784:
CryoEM structure of bacterial RapZ.GlmZ complex central to the control of cell envelope biogenesis
Method: single particle / : Islam MS, Hardwick HW, Chirgadze DY, Luisi BF

EMDB-15785:
CryoEM structure of bacterial RNaseE.RapZ.GlmZ complex central to the control of cell envelope biogenesis
Method: single particle / : Islam MS, Hardwick HW, Chirgadze DY, Luisi BF

EMDB-26995:
Cryo-EM helical reconstruction of the EPEC H6 Curly I flagellar core
Method: helical / : Kreutzberger MAB, Chatterjee S, Frankel G, Egelman EH

EMDB-27008:
Cryo-EM structure of the supercoiled EPEC H6 flagellar filament core Curly I waveform
Method: single particle / : Kreutzberger MA, Chatterjee S, Frankel G, Egelman EH

EMDB-27026:
Cryo-EM structure of the supercoiled S. islandicus REY15A archaeal flagellar filament
Method: single particle / : Kreutzberger MAB, Liu J, Krupovic M, Egelman EH

EMDB-27029:
Longer Cryo-EM Density map of the EPEC H6 Curly I bacterial flagellar filament
Method: single particle / : Kreutzberger MA, Chatterjee S, Frankel G, Egelman EH

EMDB-27059:
Cryo-EM structure of the helical E. coli K12 flagellar filament core
Method: helical / : Sonani RR, Kreutzberger MAB, Sebastian AL, Scharf B, Egelman EH

EMDB-27060:
Cryo-EM structure of the supercoiled E. coli K12 flagellar filament core, Normal waveform
Method: single particle / : Sonani RR, Kreutzberger MAB, Sebastian AL, Scharf B, Egelman EH

EMDB-27064:
Cryo-EM Helical Reconstruction of the EPEC H6 flagellar filament in the Normal waveform
Method: helical / : Kreutzberger MAB, Chatterjee S, Frankel G, Egelman EH

EMDB-27065:
Cryo-EM helical reconstruction of the S. islandicus REY15A archaeal flagellar filament
Method: helical / : Kreutzberger MAB, Liu J, Krupovic M, Egelman EH

EMDB-27076:
Cryo-EM asymmetric reconstruction of the EPEC H6 bacterial flagellar filament Normal Waveform
Method: single particle / : Kreutzberger MAB, Chatterjee S, Frankel G, Egelman EH

EMDB-24609:
Subnanometer in situ structure of the AcrAB-TolC efflux pump bound with MBX
Method: subtomogram averaging / : Muyuan MC, Zhao ZW

EMDB-11923:
Cryo-EM structure of human exostosin-like 3 (EXTL3)
Method: single particle / : Wilson LFL, Dendooven T, Hardwick SW, Chirgadze DY, Luisi BF, Logan DT, Mani K, Dupree P

EMDB-11926:
Cryo-EM structure of human exostosin-like 3 (EXTL3) in complex with UDP
Method: single particle / : Wilson LFL, Dendooven T, Hardwick SW, Chirgadze DY, Luisi BF, Logan DT, Mani K, Dupree P

EMDB-13319:
Human methemoglobin bound to Staphylococcus aureus hemophore IsdB
Method: single particle / : De Bei O, Chirgadze DY, Hardwick SW, Luisi BF, Campanini B

EMDB-13320:
Human carboxyhemoglobin bound to Staphylococcus aureus hemophore IsdB - 1:2 complex
Method: single particle / : De Bei O, Chirgadze DY, Hardwick SW, Luisi BF, Campanini B

EMDB-13325:
Human carboxyhemoglobin bound to Staphylococcus aureus hemophore IsdB - 1:1 complex
Method: single particle / : De Bei O, Chirgadze DY, Hardwick SW, Luisi BF, Campanini B

EMDB-13142:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation without nucleotides
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

EMDB-13143:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

EMDB-13144:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP and rhodamine 6G
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

EMDB-13145:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in outward-facing conformation with ADP-orthovanadate/ATP
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

EMDB-12882:
A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation. PNPase-3'ETS(leuZ)
Method: single particle / : Dendooven T, Sinha D, Roesoleva A, Cameron TA, De Lay N, Luisi BF, Bandyra K

EMDB-12883:
A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation. apo-PNPase
Method: single particle / : Dendooven T, Sinha D, Roesoleva A, Cameron TA, De Lay N, Luisi BF, Bandyra K

EMDB-12884:
A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation. PNPase-3'ETS(leuZ)-Hfq
Method: single particle / : Dendooven T, Sinha D, Roesoleva A, Cameron TA, De Lay N, Luisi BF, Bandyra K

EMDB-10535:
Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
Method: single particle / : Oerum S, Dendooven T, Gilet L, Catala M, Degut C, Trinquier A, Barraud P, Luisi B, Condon C, Tisne C

EMDB-10543:
RNase M5 bound to 50S ribosome with precursor 5S rRNA
Method: single particle / : Oerum S, Dendooven T, Gilet L, Catala M, Degut C, Trinquier A, Barraud P, Luisi B, Condon C, Tisne C

EMDB-20613:
Cryo-EM structure of a de novo designed 16-helix transmembrane nanopore, TMHC8_R.
Method: single particle / : Johnson MJ, Reggiano G

EMDB-30126:
A de novo designed transmembrane nanopore, TMH4C4
Method: single particle / : Lu P, Xu C

EMDB-10182:
Cryo-EM structure of Escherichia coli AcrBZ and DARPin in Saposin A-nanodisc with cardiolipin
Method: single particle / : Szewczak-Harris A, Du D, Newman C, Neuberger A, Luisi BF

EMDB-10183:
Cryo-EM structure of Escherichia coli AcrBZ and DARPin in Saposin A-nanodisc
Method: single particle / : Szewczak-Harris A, Du D, Newman C, Neuberger A, Luisi BF

EMDB-10184:
Cryo-EM structure of Escherichia coli AcrB and DARPin in Saposin A-nanodisc with cardiolipin
Method: single particle / : Szewczak-Harris A, Du D, Newman C, Neuberger A, Luisi BF

EMDB-10185:
Cryo-EM structure of Escherichia coli AcrB and DARPin in Saposin A-nanodisc
Method: single particle / : Szewczak-Harris A, Du D, Newman C, Neuberger A, Luisi BF

EMDB-0531:
AcrAB subcomplex - In situ structure and assembly of multidrug efflux pump AcrAB-TolC
Method: subtomogram averaging / : Chen M, Shi X, Ludtke SJ, Wang Z

EMDB-0532:
AcrAB-TolC close state - In situ structure and assembly of multidrug efflux pump AcrAB-TolC
Method: subtomogram averaging / : Chen M, Shi X, Ludtke SJ, Wang Z

EMDB-0533:
AcrAB-TolC open state - In situ structure and assembly of multidrug efflux pump AcrAB-TolC
Method: subtomogram averaging / : Chen M, Shi X, Ludtke SJ, Wang Z

EMDB-0590:
Architectural principles for Hfq/Crc-mediated regulation of gene expression Hfq-Crc-amiE 2:2:2 complex (core complex)
Method: single particle / : Pei XY, Dendooven T

EMDB-0591:
Architectural principles for Hfq/Crc-mediated regulation of gene expression Hfq-Crc-amiE 2:3:2 complex
Method: single particle / : Pei XY, Dendooven T

EMDB-0592:
Architectural principles for Hfq/Crc-mediated regulation of gene expression Hfq-Crc-amiE 2:4:2 complex
Method: single particle / : Pei XY, Dendooven T

EMDB-3652:
Structure of the MacAB-TolC ABC-type tripartite multidrug efflux pump
Method: single particle / : Fitzpatrick AWP, Llabres S, Neuberger A, Blaza JN, Bai XC, Okada U, Murakami S, van Veen HW, Zachariae U, Scheres SHW, Luisi BF, Du D

EMDB-3653:
Structure of the MacAB-TolC ABC-type tripartite multidrug efflux pump-MacB section
Method: single particle / : Fitzpatrick AWP, Llabres S, Neuberger A, Blaza JN, Bai XC, Okada U, Murakami S, van Veen HW, Zachariae U, Scheres SHW, Luisi BF, Du D

EMDB-8640:
Asymmetric structure of AcrAB-TolC tripartite multi drug efflux pump
Method: single particle / : Wang Z, Fan G, Hryc CF, Blaza JN, Serysheva II, Schmid MF, Chiu W, Luisi BF, Du D

EMDB-3636:
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Method: single particle / : Wang Z, Fan G, Hryc CF, Blaza JN, Serysheva II, Schmid MF, Chiu W, Luisi BF, Du D

EMDB-8636:
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Method: single particle / : wang Z, fan G, Hryc CF, Blaza JN, Serysheva II, Schmid MF, Chiu W, Luisi BF, Du D

EMDB-5915:
The structure of a complete multidrug efflux pump
Method: single particle / : Du D, Wang Z, James NR, Voss JE, Klimont E, Ohene-Agyei T, Venter H, Chiu W, Luisi BF

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more