[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 13,781 items for (author: li & zh)

EMDB-18594:
Cryo-EM structure of E. coli cytochrome bo3 quinol oxidase assembled in peptidiscs
Method: single particle / : Gao Y, Zhang Y, Hakke S, Peters PJ, Ravelli RBG

PDB-8qqk:
Cryo-EM structure of E. coli cytochrome bo3 quinol oxidase assembled in peptidiscs
Method: single particle / : Gao Y, Zhang Y, Hakke S, Peters PJ, Ravelli RBG

EMDB-18664:
Structure of the native microtubule lattice nucleated from the yeast spindle pole body
Method: subtomogram averaging / : Dendooven T, Yatskevich S, Burt A, Bellini D, Kilmartin J, Barford D

EMDB-18665:
Structure of the native y-Tubulin Ring Complex (yTuRC) capping microtubule minus ends at the spindle pole body
Method: subtomogram averaging / : Dendooven T, Yatskevich S, Burt A, Bellini D, Kilmartin J, Barford D

EMDB-18666:
Structure of the y-Tubulin Small Complex (yTuSC) as part of the native y-Tubulin Ring Complex (yTuRC) capping microtubule minus ends at the spindle pole body
Method: subtomogram averaging / : Dendooven T, Yatskevich S, Burt A, Bellini D, Kilmartin J, Barford D

PDB-8qv0:
Structure of the native microtubule lattice nucleated from the yeast spindle pole body
Method: subtomogram averaging / : Dendooven T, Yatskevich S, Burt A, Bellini D, Kilmartin J, Barford D

PDB-8qv2:
Structure of the native y-Tubulin Ring Complex (yTuRC) capping microtubule minus ends at the spindle pole body
Method: subtomogram averaging / : Dendooven T, Yatskevich S, Burt A, Bellini D, Kilmartin J, Barford D

PDB-8qv3:
Structure of the y-Tubulin Small Complex (yTuSC) as part of the native y-Tubulin Ring Complex (yTuRC) capping microtubule minus ends at the spindle pole body
Method: subtomogram averaging / : Dendooven T, Yatskevich S, Burt A, Bellini D, Kilmartin J, Barford D

EMDB-37130:
Cryo-EM structure of the human parainfluenza virus hPIV3 L-P polymerase in dimeric form
Method: single particle / : Xie J, Wang L, Zhai G, Wu D, Lin Z, Wang M, Yan X, Gao L, Huang X, Fearns R, Chen S

EMDB-37131:
Cryo-EM structure of the human parainfluenza virus hPIV3 L-P polymerase in monomeric form
Method: single particle / : Xie J, Wang L, Zhai G, Wu D, Lin Z, Wang M, Yan X, Gao L, Huang X, Fearns R, Chen S

PDB-8kdb:
Cryo-EM structure of the human parainfluenza virus hPIV3 L-P polymerase in dimeric form
Method: single particle / : Xie J, Wang L, Zhai G, Wu D, Lin Z, Wang M, Yan X, Gao L, Huang X, Fearns R, Chen S

PDB-8kdc:
Cryo-EM structure of the human parainfluenza virus hPIV3 L-P polymerase in monomeric form
Method: single particle / : Xie J, Wang L, Zhai G, Wu D, Lin Z, Wang M, Yan X, Gao L, Huang X, Fearns R, Chen S

EMDB-34880:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 (apo)
Method: single particle / : Wei Y, Yu Z, Zhao Y

EMDB-34891:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 in complex with tetrandrine (TET)
Method: single particle / : Wei Y, Yu Z, Zhao Y

EMDB-34892:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 in complex with benidipine (BEN)
Method: single particle / : Wei Y, Yu Z, Zhao Y

PDB-8hlp:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 (apo)
Method: single particle / : Wei Y, Yu Z, Zhao Y

PDB-8hma:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 in complex with tetrandrine (TET)
Method: single particle / : Wei Y, Yu Z, Zhao Y

PDB-8hmb:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 in complex with benidipine (BEN)
Method: single particle / : Wei Y, Yu Z, Zhao Y

EMDB-36228:
Cryo-EM structure of Mi3 fused with FKBP
Method: single particle / : Zhang HW, Kang W, Xue C

EMDB-36230:
Cryo-EM structure of Mi3 fused with LOV2
Method: single particle / : Zhang HW, Kang W, Xue C

PDB-8jga:
Cryo-EM structure of Mi3 fused with FKBP
Method: single particle / : Zhang HW, Kang W, Xue C

PDB-8jgc:
Cryo-EM structure of Mi3 fused with LOV2
Method: single particle / : Zhang HW, Kang W, Xue C

PDB-8yy8:
Fzd7 -Gs complex
Method: single particle / : Chen B, Xu L, Han GW, Xu F

EMDB-36594:
Cryo-EM structure of a designed AAV8-based vector
Method: single particle / : Ke X, Luo S, Zheng Q, Jiang H, Liu F, Sun X

PDB-8jre:
Cryo-EM structure of a designed AAV8-based vector
Method: single particle / : Ke X, Luo S, Zheng Q, Jiang H, Liu F, Sun X

EMDB-40180:
MsbA bound to cerastecin C
Method: single particle / : Chen Y, Klein D

EMDB-19718:
RNA polymerase II core initially transcribing complex with an ordered RNA of 8 nt
Method: single particle / : Zhan Y, Grabbe F, Oberbeckmann E, Dienemann C, Cramer P

EMDB-19719:
RNA polymerase II core initially transcribing complex with an ordered RNA of 10 nt
Method: single particle / : Zhan Y, Grabbe F, Oberbeckmann E, Dienemann C, Cramer P

EMDB-19720:
RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state b (composite structure)
Method: single particle / : Zhan Y, Grabber F, Oberbeckmann E, Dienemann C, Cramer P

EMDB-19726:
RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state a (composite structure)
Method: single particle / : Zhan Y, Grabbe F, Oberbeckmann E, Dienemann C, Cramer P

PDB-8s51:
RNA polymerase II core initially transcribing complex with an ordered RNA of 8 nt
Method: single particle / : Zhan Y, Grabbe F, Oberbeckmann E, Dienemann C, Cramer P

PDB-8s52:
RNA polymerase II core initially transcribing complex with an ordered RNA of 10 nt
Method: single particle / : Zhan Y, Grabbe F, Oberbeckmann E, Dienemann C, Cramer P

PDB-8s54:
RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state b (composite structure)
Method: single particle / : Zhan Y, Grabber F, Oberbeckmann E, Dienemann C, Cramer P

PDB-8s55:
RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state a (composite structure)
Method: single particle / : Zhan Y, Grabbe F, Oberbeckmann E, Dienemann C, Cramer P

EMDB-17766:
CryoEM structure of Nal1 protein, allele SPIKE, from Oryza sativa japonica group
Method: single particle / : Huang LY, Rety S, Xi XG

EMDB-17768:
CryoEM structure of Nal1 protein, allele IR64, from Oryza sativa indica cultivar
Method: single particle / : Huang LY, Rety S, Xi XG

PDB-8pn1:
CryoEM structure of Nal1 protein, allele SPIKE, from Oryza sativa japonica group
Method: single particle / : Huang LY, Rety S, Xi XG

PDB-8pn2:
CryoEM structure of Nal1 protein, allele IR64, from Oryza sativa indica cultivar
Method: single particle / : Huang LY, Rety S, Xi XG

EMDB-19861:
Vertebrate microtubule-capping gamma-tubulin ring complex
Method: single particle / : Vermeulen BJA, Pfeffer S

PDB-9eoj:
Vertebrate microtubule-capping gamma-tubulin ring complex
Method: single particle / : Vermeulen BJA, Pfeffer S

EMDB-43931:
CryoEM structure of activated CRAF/MEK/14-3-3 complex with NST-628
Method: single particle / : Quade B, Cohen SE, Huang X

EMDB-43932:
Activated CRAF/MEK heterotetramer from focused refinement of CRAF/MEK/14-3-3 complex
Method: single particle / : Quade B, Cohen SE, Huang X

PDB-9axa:
CryoEM structure of activated CRAF/MEK/14-3-3 complex with NST-628
Method: single particle / : Quade B, Cohen SE, Huang X

PDB-9axc:
Activated CRAF/MEK heterotetramer from focused refinement of CRAF/MEK/14-3-3 complex
Method: single particle / : Quade B, Cohen SE, Huang X

EMDB-37362:
CryoEM structure of human PI3K-alpha (P85/P110-H1047R) with QR-7909 binding at an allosteric site
Method: single particle / : Huang X, Ren X, Zhong W

EMDB-37363:
CryoEM structure of human PI3K-alpha (P85/P110-H1047R) with QR-8557 binding at an allosteric site
Method: single particle / : Huang X, Ren X, Zhong W

PDB-8w9a:
CryoEM structure of human PI3K-alpha (P85/P110-H1047R) with QR-7909 binding at an allosteric site
Method: single particle / : Huang X, Ren X, Zhong W

PDB-8w9b:
CryoEM structure of human PI3K-alpha (P85/P110-H1047R) with QR-8557 binding at an allosteric site
Method: single particle / : Huang X, Ren X, Zhong W

EMDB-35163:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 5.5
Method: single particle / : Bharambe N, Li Z, Basak S

EMDB-35164:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in closed state
Method: single particle / : Bharambe N, Li Z, Basak S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more