[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 66 items for (author: lea, & s.m.)

PDB-8gl6:
The Type 9 Secretion System in vitro assembled, RemA-CTD substrate bound complex
Method: single particle / : Deme JC, Lea SM

PDB-8gl8:
The Type 9 Secretion System Extended Translocon - SprA-PorV-PPI-RemZ-SkpA-SprE complex
Method: single particle / : Deme JC, Lea SM

PDB-8glj:
The Type 9 Secretion System in vitro assembled, FspA-CTD substrate bound complex
Method: single particle / : Deme JC, Lea SM

PDB-8glk:
The Type 9 Secretion System dGldL peak II, NucA substrate bound complex
Method: single particle / : Deme JC, Lea SM

PDB-8glm:
The Type 9 Secretion System in vivo assembled, RemZ substrate bound complex - conformation 1
Method: single particle / : Deme JC, Lea SM

PDB-8gln:
The Type 9 Secretion System in vivo assembled, RemZ substrate bound complex - conformation 2
Method: single particle / : Deme JC, Lea SM

PDB-8ucs:
Cryo-EM structure of the flagellar MotAB stator bound to FliG
Method: single particle / : Deme JC, Johnson S, Lea SM

PDB-8umd:
Cryo-EM structure of a single subunit of a Counterclockwise-locked form of the Salmonella enterica Typhimurium flagellar C-ring.
Method: single particle / : Johnson S, Deme JC, Lea SM

PDB-8umx:
Cryo-EM structure of a single subunit of a Clockwise-locked form of the Salmonella enterica Typhimurium flagellar C-ring.
Method: single particle / : Johnson S, Deme JC, Lea SM

PDB-8uox:
Cryo-EM structure of a Counterclockwise locked form of the Salmonella enterica Typhimurium flagellar C-ring, with C34 symmetry applied
Method: single particle / : Johnson S, Deme JC, Lea SM

PDB-8upl:
Cryo-EM structure of a Clockwise locked form of the Salmonella enterica Typhimurium flagellar C-ring, with C34 symmetry applied
Method: single particle / : Johnson S, Deme JC, Lea SM

PDB-8fy4:
Structure of NOT1:NOT10:NOT11 module of the chicken CCR4-NOT complex
Method: single particle / : Lea SM, Deme JC, Raisch T, Levdansky Y, Valkov E

PDB-8sa2:
Adenosylcobalamin-bound riboswitch dimer, form 1
Method: single particle / : Ding J, Deme JC, Stagno JR, Yu P, Lea SM, Wang YX

PDB-8sa3:
Adenosylcobalamin-bound riboswitch dimer, form 2
Method: single particle / : Ding J, Deme JC, Stagno JR, Yu P, Lea SM, Wang YX

PDB-8sa4:
Adenosylcobalamin-bound riboswitch dimer, form 3
Method: single particle / : Ding J, Deme JC, Stagno JR, Yu P, Lea SM, Wang YX

PDB-8sa5:
Adenosylcobalamin-bound riboswitch dimer, form 4
Method: single particle / : Ding J, Deme JC, Stagno JR, Yu P, Lea SM, Wang YX

PDB-8sa6:
apo form of adenosylcobalamin riboswitch dimer
Method: single particle / : Ding J, Deme JC, Stagno JR, Yu P, Lea SM, Wang YX

PDB-8fy3:
Structure of NOT1:NOT10:NOT11 module of the human CCR4-NOT complex
Method: single particle / : Lea SM, Deme JC, Raisch T, Pekovic F, Valkov E

PDB-8hc1:
CryoEM structure of Helicobacter pylori UreFD/urease complex
Method: single particle / : Nim YS, Fong IYH, Deme J, Tsang KL, Caesar J, Johnson S, Wong KB, Lea SM

PDB-8hcn:
CryoEM Structure of Klebsiella pneumoniae UreD/urease complex
Method: single particle / : Nim YS, Fong IYH, Deme J, Tsang KL, Caesar J, Johnson S, Wong KB, Lea SM

PDB-8sah:
Huntingtin C-HEAT domain in complex with HAP40
Method: single particle / : Harding RJ, Deme JC, Alteen MG, Arrowsmith CH, Lea SM, Structural Genomics Consortium (SGC)

PDB-7sat:
Structure of PorLM, the proton-powered motor that drives Type IX protein secretion
Method: single particle / : Hennell James R, Deme JC, Lea SM

PDB-7sau:
Structure of GldLM, the proton-powered motor that drives Type IX protein secretion and gliding motility in Schleiferia thermophila
Method: single particle / : Hennell James R, Deme JC, Lea SM

PDB-7sax:
Structure of GldLM, the proton-powered motor that drives Type IX protein secretion and gliding motility in Sphingobacterium wenxiniae
Method: single particle / : Hennell James R, Deme JC, Lea SM

PDB-7saz:
Structure of GldLM, the proton-powered motor that drives Type IX protein secretion and gliding motility in Capnocytophaga canimorsus
Method: single particle / : Hennell James R, Deme JC, Lea SM

PDB-7sb2:
Structure of the periplasmic domain of GldM from Capnocytophaga canimorsus
Method: single particle / : Hennell James R, Deme JC, Lea SM

PDB-7yxx:
Cryo-EM structure of USP9X
Method: single particle / : Deme JC, Halabelian L, Arrowsmith CH, Lea SM, Structural Genomics Consortium (SGC)

PDB-7yxy:
Cryo-EM structure of USP9X, local refinement of monomer
Method: single particle / : Deme JC, Halabelian L, Arrowsmith CH, Lea SM, Structural Genomics Consortium (SGC)

PDB-7p9u:
Cryo EM structure of System XC- in complex with glutamate
Method: single particle / : Parker JL, Deme JC, Lea SM, Newstead S

PDB-7p9v:
Cryo EM structure of System XC-
Method: single particle / : Parker JL, Deme JC, Lea SM, Newstead S

PDB-7oxp:
Cryo-EM structure of yeast Sei1
Method: single particle / : Deme JC, Lea SM

PDB-7oxr:
Cryo-EM structure of yeast Sei1 with locking helix deletion
Method: single particle / : Deme JC, Lea SM

PDB-7nqk:
Cryo-EM structure of the mammalian peptide transporter PepT2
Method: single particle / : Parker JL, Deme JC, Lea SM, Newstead S

PDB-7nvh:
Cryo-EM structure of the mycolic acid transporter MmpL3 from M. tuberculosis
Method: single particle / : Adams O, Deme JC, Parker JL, Lea SM, Newstead S

PDB-7akv:
The cryo-EM structure of the Vag8-C1 inhibitor complex
Method: single particle / : Johnson S, Lea SM, Deme JC, Furlong E, Dhillon A

PDB-7bc6:
Cryo-EM structure of the outward open proton coupled folate transporter at pH 7.5
Method: single particle / : Parker JL, Deme JC, Lea SM, Newstead S

PDB-7bc7:
Cryo-EM structure of the proton coupled folate transporter at pH 6.0 bound to pemetrexed
Method: single particle / : Parker JL, Deme JC, Lea SM, Newstead S

PDB-7bgl:
Salmonella LP ring 26 mer refined in C26 map
Method: single particle / : Johnson S, Furlong E, Lea SM

PDB-7bhq:
In situ assembled Salmonella FlgD hook cap complex
Method: single particle / : Johnson S, Furlong E, Lea SM

PDB-7bin:
Salmonella export gate and rod refined in focussed C1 map
Method: single particle / : Johnson S, Furlong E, Lea SM

PDB-7bj2:
Salmonella flagellar basal body assembly intermediate - P ring alone structure
Method: single particle / : Johnson S, Furlong E, Lea SM

PDB-7bk0:
Salmonella FliF ring (34mer) in intact basal body - C1
Method: single particle / : Johnson S, Furlong E, Lea SM

PDB-7nvg:
Salmonella flagellar basal body refined in C1 map
Method: single particle / : Johnson S, Furlong E, Lea SM

PDB-6ys8:
Structure of GldLM, the proton-powered motor that drives protein transport and gliding motility
Method: single particle / : Hennell James R, Deme JC, Lea SM

PDB-6ysf:
Structure of the flagellar MotAB stator complex from Clostridium sporogenes
Method: single particle / : Lea SM, Deme JC, Johnson SJ

PDB-6ysl:
Structure of the flagellar MotAB stator complex from Bacillus subtilis
Method: single particle / : Lea SM, Deme JC, Johnson SJ

PDB-6x9o:
High resolution cryoEM structure of huntingtin in complex with HAP40
Method: single particle / : Harding RJ, Deme JC, Lea SM, Arrowsmith CH, Structural Genomics Consortium (SGC)

PDB-6s3l:
Structure of the core of the flagellar export apparatus from Vibrio mimicus, the FliPQR-FlhB complex.
Method: single particle / : Kuhlen L, Johnson S, Deme JC, Lea SM

PDB-6s3r:
Structure of the FliPQR complex from the flagellar type 3 secretion system of Pseudomonas savastanoi.
Method: single particle / : Kuhlen L, Johnson S, Deme JC, Lea SM

PDB-6s3s:
Structure of the FliPQR complex from the flagellar type 3 secretion system of Vibrio mimicus.
Method: single particle / : Kuhlen L, Johnson S, Deme JC, Lea SM

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more