[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 466 items for (author: l. & cheng)

PDB-8y6v:
Near-atomic structure of icosahedrally averaged jumbo bacteriophage PhiKZ capsid
Method: single particle / : Yang Y, Shao Q, Guo M, Han L, Zhao X, Wang A, Li X, Wang B, Pan J, Chen Z, Fokine A, Sun L, Fang Q

PDB-8tpu:
Subtomogram averaged consensus structure of the malarial 80S ribosome in Plasmodium falciparum-infected human erythrocytes
Method: subtomogram averaging / : Anton L, Cheng W, Zhu X, Ho CM

PDB-8xql:
Structure of human class T GPCR TAS2R14-miniGs/gust complex with Aristolochic acid A.
Method: single particle / : Hu XL, Wu LJ, Hua T, Liu ZJ

PDB-8xqn:
Structure of human class T GPCR TAS2R14-DNGi complex with Aristolochic acid A.
Method: single particle / : Hu XL, Wu LJ, Hua T, Liu ZJ

PDB-8xqo:
Structure of human class T GPCR TAS2R14-Gi complex with Aristolochic acid A.
Method: single particle / : Hu XL, Wu LJ, Hua T, Liu ZJ

PDB-8xqp:
Structure of human class T GPCR TAS2R14-Gustducin complex with Aristolochic acid A.
Method: single particle / : Hu XL, Wu LJ, Hua T, Liu ZJ

PDB-8xqr:
Structure 2 of human class T GPCR TAS2R14-miniGs/gust complex with Flufenamic acid.
Method: single particle / : Hu XL, Wu LJ, Hua T, Liu ZJ

PDB-8xqs:
Structure of human class T GPCR TAS2R14-DNGi complex with Flufenamic acid.
Method: single particle / : Hu XL, Wu LJ, Hua T, Liu ZJ

PDB-8xqt:
Structure of human class T GPCR TAS2R14-Gi complex.
Method: single particle / : Hu XL, Pei Y, Wu LJ, Hua T, Liu ZJ

PDB-8yky:
Structure of human class T GPCR TAS2R14-Ggustducin complex with agonist 28.1
Method: single particle / : Hu XL, Wu LJ, Hua T, Liu ZJ

PDB-8jzo:
CryoEM structure of the NADP-dependent malic enzyme MaeB
Method: single particle / : Jiang WX, Cheng XQ, Wu M, Ma LX, Xing Q

PDB-8k04:
CryoEM structure of a 2,3-hydroxycinnamic acid 1,2-dioxygenase MhpB in apo form
Method: single particle / : Jiang WX, Cheng XQ, Ma LX, Xing Q

PDB-8k0a:
CryoEM structure of 3-phenylpropionate/cinnamic acid dioxygenase HcaE-HcaF complex
Method: single particle / : Jiang WX, Cheng XQ, Ma LX, Xing Q

PDB-8jzl:
CryoEM structure of the Salmonella effector inositol phosphate phosphatase SopB
Method: single particle / : Jiang WX, Cheng XQ, Wu M, Ma LX

PDB-8i13:
Cryo-EM structure of 6-subunit Smc5/6
Method: single particle / : Qian L, Jun Z, Xiang Z, Cheng T, Zhaoning W, Duo J, Zhenguo C, Wang L

PDB-8i21:
Cryo-EM structure of 6-subunit Smc5/6 arm region
Method: single particle / : Jun Z, Qian L, Xiang Z, Tong C, Zhaoning W, Duo J, Zhenguo C, Lanfeng W

PDB-8i4u:
Cryo-EM structure of 5-subunit Smc5/6 hinge region
Method: single particle / : Qian L, Jun Z, Xiang Z, Wang Z, Tong C, Duo J, Zhenguo C, Wang L

PDB-8i4v:
Cryo-EM structure of 5-subunit Smc5/6 arm region
Method: single particle / : Qian L, Jun Z, Xiang Z, Cheng T, Zhaoning W, Zhenguo C, Wang L

PDB-8i4w:
Cryo-EM structure of 5-subunit Smc5/6 head region
Method: single particle / : Qian L, Jun Z, Xiang Z, Zhaoning W, Cheng T, Duo J, Zhenguo C, Wang L

PDB-8i4x:
Cryo-EM structure of 5-subunit Smc5/6
Method: single particle / : Qian L, Jun Z, Xiang Z, Zhaoning W, Tong C, Duo J, Zhenguo C, Wang L

PDB-8wjl:
Cryo-EM structure of 6-subunit Smc5/6 hinge region
Method: single particle / : Li Q, Zhang J, Zhang X, Cheng T, Wang Z, Jin D, Chen Z, Wang L

PDB-8wjn:
Cryo-EM structure of 6-subunit Smc5/6 head region
Method: single particle / : Li Q, Zhang J, Zhang X, Cheng T, Wang Z, Jin D, Chen Z, Wang L

PDB-8wjo:
Cryo-EM structure of 8-subunit Smc5/6 arm region
Method: single particle / : Li Q, Zhang J, Zhang X, Cheng T, Wang Z, Jin D, Chen Z, Wang L

PDB-8hqs:
Cryo-EM structure of 8-subunit Smc5/6 head region
Method: single particle / : Qian L, Jun Z, Xiang Z, Tong C, Wang Z, Duo J, Zhenguo C, Wang L

PDB-8yut:
Cryo-EM structure of the amthamine-bound H2R-Gs complex
Method: single particle / : Shen Q, Tang X, Wen X, Cheng S, Xiao P, Zang S, Shen D, Jiang L, Zheng Y, Zhang H, Xu H, Mao C, Zhang M, Hu W, Sun J, Chen Z, Zhang Y

PDB-8yuu:
Cryo-EM structure of the histamine-bound H3R-Gi complex
Method: single particle / : Shen Q, Tang X, Wen X, Cheng S, Xiao P, Zang S, Shen D, Jiang L, Zheng Y, Zhang H, Xu H, Mao C, Zhang M, Hu W, Sun J, Chen Z, Zhang Y

PDB-8yuv:
Cryo-EM structure of the immepip-bound H3R-Gi complex
Method: single particle / : Shen Q, Tang X, Wen X, Cheng S, Xiao P, Zang S, Shen D, Jiang L, Zheng Y, Zhang H, Xu H, Mao C, Zhang M, Hu W, Sun J, Chen Z, Zhang Y

PDB-8yrg:
CryoEM structure of fospropofol-bound MRGPRX4-Gq complex
Method: single particle / : Cao C, Fay JF, Roth BL

PDB-8hsb:
Cryo-EM Structure of CdnG-E2 complex from Serratia marcescens (UltrAuFoil)
Method: single particle / : Xiao J, Wang L

PDB-8yjy:
Cryo-EM Structure of CdnG-E2 complex from Serratia marcescens
Method: single particle / : Xiao J, Wang L

PDB-8khc:
SARS-CoV-2 Omicron spike in complex with 5817 Fab
Method: single particle / : Cao L, Wang X

PDB-8khd:
The interface structure of Omicron RBD binding to 5817 Fab
Method: single particle / : Cao L, Wang X

PDB-8vy7:
CryoEM structure of Gi-coupled TAS2R14 with cholesterol and an intracellular tastant
Method: single particle / : Kim Y, Gumpper RH, Roth BL

PDB-8vy9:
CryoEM structure of Ggust-coupled TAS2R14 with cholesterol and an intracellular tastant
Method: single particle / : Kim Y, Gumpper RH, Roth BL

PDB-8jts:
hOCT1 in complex with metformin in outward open conformation
Method: single particle / : Zhang S, Zhu A, Kong F, Chen J, Lan B, He G, Gao K, Cheng L, Yan C, Chen L, Liu X

PDB-8jtt:
hOCT1 in complex with metformin in outward occluded conformation
Method: single particle / : Zhang S, Zhu A, Kong F, Chen J, Lan B, He G, Gao K, Cheng L, Yan C, Chen L, Liu X

PDB-8jtv:
hOCT1 in complex with metformin in inward occluded conformation
Method: single particle / : Zhang S, Zhu A, Kong F, Chen J, Lan B, He G, Gao K, Cheng L, Yan C, Chen L, Liu X

PDB-8jtw:
hOCT1 in complex with nb5660 in inward facing partially open 1 conformation
Method: single particle / : Zhang S, Zhu A, Kong F, Chen J, Lan B, He G, Gao K, Cheng L, Yan C, Chen L, Liu X

PDB-8jtx:
hOCT1 in complex with nb5660 in inward facing fully open conformation
Method: single particle / : Zhang S, Zhu A, Kong F, Chen J, Lan B, He G, Gao K, Cheng L, Yan C, Chen L, Liu X

PDB-8jty:
hOCT1 in complex with nb5660 in inward facing partially open 2 conformation
Method: single particle / : Zhang S, Zhu A, Kong F, Chen J, Lan B, He G, Gao K, Cheng L, Yan C, Chen L, Liu X

PDB-8jtz:
hOCT1 in complex with spironolactone in outward facing partially occluded conformation
Method: single particle / : Zhang S, Zhu A, Kong F, Chen J, Lan B, He G, Gao K, Cheng L, Yan C, Chen L, Liu X

PDB-8ju0:
hOCT1 in complex with spironolactone in inward facing occluded conformation
Method: single particle / : Zhang S, Zhu A, Kong F, Chen J, Lan B, He G, Gao K, Cheng L, Yan C, Chen L, Liu X

PDB-8twv:
ELIC5 with Propylamine in spNW15 nanodiscs with 2:1:1 POPC:POPE:POPG
Method: single particle / : Dalal V, Arcario MJ, Petroff II JT, Deitzen NM, Tan BK, Brannigan G, Cheng WWL

PDB-8twz:
ELIC with Propylamine in spNW15 nanodiscs with 2:1:1 POPC:POPE:POPG
Method: single particle / : Dalal V, Arcario MJ, Petroff II JT, Deitzen NM, Tan BK, Brannigan G, Cheng WWL

PDB-8jq9:
Novel Anti-phage System
Method: single particle / : Li J, Wang Z, Wang L

PDB-8jqb:
Structure of Gabija GajA-GajB 4:4 Complex
Method: single particle / : Li J, Wang Z, Wang L

PDB-8jqc:
Novel Anti-phage System
Method: single particle / : Li J, Wang Z, Wang L

PDB-8wy4:
GajA tetramer with ATP
Method: single particle / : Li J, Wang Z, Wang L

PDB-8wy5:
Structure of Gabija GajA in complex with DNA
Method: single particle / : Li J, Wang Z, Wang L

PDB-8x51:
Cryo-EM structure of Gabija GajA in complex with DNA(focused refinement)
Method: single particle / : Li J, Wang Z, Wang L

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more