[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 403 items for (author: kim & hy)

EMDB-35377:
Cryo-EM structure of GPR156 of GPR156-miniGo-scFv16 complex (local refine)
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35378:
Cryo-EM structure of miniGo-scFv16 of GPR156-miniGo-scFv16 complex (local refine)
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35380:
Cryo-EM structure of GPR156-miniGo-scFv16 complex
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35382:
Cryo-EM structure of GPR156A/B of G-protein free GPR156 (local refine)
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35389:
Cryo-EM structure of GPR156C/D of G-protein free GPR156 (local refine)
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35390:
Cryo-EM structure of G-protein free GPR156
Method: single particle / : Shin J, Park J, Cho Y

PDB-8ieb:
Cryo-EM structure of GPR156 of GPR156-miniGo-scFv16 complex (local refine)
Method: single particle / : Shin J, Park J, Cho Y

PDB-8iec:
Cryo-EM structure of miniGo-scFv16 of GPR156-miniGo-scFv16 complex (local refine)
Method: single particle / : Shin J, Park J, Cho Y

PDB-8ied:
Cryo-EM structure of GPR156-miniGo-scFv16 complex
Method: single particle / : Shin J, Park J, Cho Y

PDB-8iei:
Cryo-EM structure of GPR156A/B of G-protein free GPR156 (local refine)
Method: single particle / : Shin J, Park J, Cho Y

PDB-8iep:
Cryo-EM structure of GPR156C/D of G-protein free GPR156 (local refine)
Method: single particle / : Shin J, Park J, Cho Y

PDB-8ieq:
Cryo-EM structure of G-protein free GPR156
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35234:
Cryo-EM structure of Acipimox bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer
Method: single particle / : Park JH, Ishimoto N, Park SY

EMDB-35235:
Cryo-EM structure of GSK256073 bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer
Method: single particle / : Park JH, Ishimoto N, Park SY

PDB-8i7v:
Cryo-EM structure of Acipimox bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer
Method: single particle / : Park JH, Ishimoto N, Park SY

PDB-8i7w:
Cryo-EM structure of GSK256073 bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer
Method: single particle / : Park JH, Ishimoto N, Park SY

EMDB-28752:
Cryo-electron tomography of wild type a-synuclein preformed fibrils
Method: electron tomography / : Jiang J, Boparai N, Dai W, Kim YS

EMDB-28753:
Cryo-electron tomography of S42Y a-synuclein preformed fibrils
Method: electron tomography / : Jiang J, Boparai N, Dai W, Kim YS

EMDB-34022:
Cryo-EM structure of human topoisomerase II beta in complex with DNA and etoposide
Method: single particle / : Naganuma M, Ehara H, Kim D, Nakagawa R, Cong A, Bu H, Jeong J, Jang J, Schellenberg MJ, Bunch H, Sekine S

PDB-7yq8:
Cryo-EM structure of human topoisomerase II beta in complex with DNA and etoposide
Method: single particle / : Naganuma M, Ehara H, Kim D, Nakagawa R, Cong A, Bu H, Jeong J, Jang J, Schellenberg MJ, Bunch H, Sekine S

EMDB-37712:
Small-heat shock protein from Methanocaldococcus jannaschii, Hsp16.5
Method: single particle / : Lee J, Ryu B, Kim T, Kim KK

EMDB-37713:
Small-heat shock protein from Methanocaldococcus jannaschii, Hsp16.5
Method: single particle / : Lee J, Ryu B, Kim T, Kim KK

PDB-8wp9:
Small-heat shock protein from Methanocaldococcus jannaschii, Hsp16.5
Method: single particle / : Lee J, Ryu B, Kim T, Kim KK

EMDB-35010:
Human Consensus Olfactory Receptor OR52c in Complex with Octanoic Acid (OCA) and G Protein
Method: single particle / : Choi CW, Bae J, Choi HJ, Kim J

EMDB-35770:
Human Consensus Olfactory Receptor OR52c in Complex with Octanoic Acid (OCA) and G Protein (Consensus map)
Method: single particle / : Choi CW, Bae J, Choi HJ

EMDB-35772:
Human Consensus Olfactory Receptor OR52c in Complex with Octanoic Acid (OCA) and G Protein (Receptor-focused map)
Method: single particle / : Choi CW, Bae J, Choi HJ

EMDB-35773:
Human Consensus Olfactory Receptor OR52c in Complex with Octanoic Acid (OCA) and G Protein (G protein-focused map)
Method: single particle / : Choi CW, Bae J, Choi HJ

EMDB-35971:
Human Consensus Olfactory Receptor OR52c in apo state, OR52c-bRIL
Method: single particle / : Choi CW, Bae J, Choi HJ, Kim J

EMDB-37336:
Human Consensus Olfactory Receptor OR52c in apo state, OR52c only
Method: single particle / : Choi CW, Bae J, Choi HJ, Kim J

PDB-8hti:
Human Consensus Olfactory Receptor OR52c in Complex with Octanoic Acid (OCA) and G Protein
Method: single particle / : Choi CW, Bae J, Choi HJ, Kim J

PDB-8j46:
Human Consensus Olfactory Receptor OR52c in apo state, OR52c-bRIL
Method: single particle / : Choi CW, Bae J, Choi HJ, Kim J

PDB-8w77:
Human Consensus Olfactory Receptor OR52c in apo state, OR52c only
Method: single particle / : Choi CW, Bae J, Choi HJ, Kim J

EMDB-35904:
AtSLAC1 8D mutant in closed state
Method: single particle / : Lee Y, Lee S

EMDB-35920:
AtSLAC1 in open state
Method: single particle / : Lee Y, Lee S

PDB-8j0j:
AtSLAC1 8D mutant in closed state
Method: single particle / : Lee Y, Lee S

PDB-8j1e:
AtSLAC1 in open state
Method: single particle / : Lee Y, Lee S

EMDB-34303:
AtSLAC1 6D mutant in closed state
Method: single particle / : Lee Y, Lee S

EMDB-34304:
AtSLAC1 6D mutant in open state
Method: single particle / : Lee Y, Lee S

PDB-8gw6:
AtSLAC1 6D mutant in closed state
Method: single particle / : Lee Y, Lee S

PDB-8gw7:
AtSLAC1 6D mutant in open state
Method: single particle / : Lee Y, Lee S

EMDB-40088:
HIV-1 Env subtype C CZA97.12 SOSIP.664 in complex with 3BNC117 Fab
Method: single particle / : Ozorowski G, Lee JH, Ward AB

PDB-8gje:
HIV-1 Env subtype C CZA97.12 SOSIP.664 in complex with 3BNC117 Fab
Method: single particle / : Ozorowski G, Lee JH, Ward AB

EMDB-29530:
SARS-CoV-2 XBB.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-29531:
SARS-CoV-2 BQ.1.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-40240:
SARS-CoV-2 BN.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8fxb:
SARS-CoV-2 XBB.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8fxc:
SARS-CoV-2 BQ.1.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8s9g:
SARS-CoV-2 BN.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-33274:
Human Cx36/GJD2 (N-terminal deletion mutant) gap junction channel in soybean lipids (D6 symmetry)
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

PDB-7xl8:
Human Cx36/GJD2 (N-terminal deletion mutant) gap junction channel in soybean lipids (D6 symmetry)
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more