[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 34 items for (author: karuppasamy & m)

EMDB-10354:
Bat Influenza A polymerase pre-termination complex with pyrophosphate using 44-mer vRNA template with mutated oligo(U) sequence
Method: single particle / : Wandzik JM, Kouba T, Cusack S

EMDB-10355:
Bat Influenza A polymerase elongation complex with incoming UTP analogue (core + endonuclease only)
Method: single particle / : Wandzik JM, Kouba T, Cusack S

EMDB-10356:
Bat Influenza A polymerase pre-initiation complex
Method: single particle / : Wandzik JM, Kouba T, Cusack S

EMDB-10357:
Bat Influenza A polymerase product dissociation complex using 44-mer vRNA template with mutated oligo(U) sequence
Method: single particle / : Wandzik JM, Kouba T, Cusack S

EMDB-10358:
Bat Influenza A polymerase stuttering complex using 44-mer vRNA template with intact oligo(U) sequence
Method: single particle / : Wandzik JM, Kouba T, Cusack S

EMDB-10359:
Bat Influenza A polymerase product dissociation complex using 44-mer vRNA template with intact oligo(U) sequence
Method: single particle / : Wandzik JM, Kouba T, Cusack S

EMDB-10360:
Bat Influenza A polymerase elongation complex with incoming UTP analogue (complete polymerase)
Method: single particle / : Wandzik JM, Kouba T, Cusack S

EMDB-10361:
Human Influenza B polymerase recycling complex
Method: single particle / : Wandzik JM, Kouba T, Karuppasamy M, Cusack S

EMDB-10368:
Bat Influenza A polymerase recycling complex
Method: single particle / : Wandzik JM, Kouba T, Cusack S

EMDB-10603:
Bat Influenza A polymerase termination complex with pyrophosphate using 44-mer vRNA template with mutated oligo(U) sequence
Method: single particle / : Wandzik JM, Kouba T, Cusack S

PDB-6szu:
Bat Influenza A polymerase pre-termination complex with pyrophosphate using 44-mer vRNA template with mutated oligo(U) sequence
Method: single particle / : Wandzik JM, Kouba T, Cusack S

PDB-6szv:
Bat Influenza A polymerase elongation complex with incoming UTP analogue (core + endonuclease only)
Method: single particle / : Wandzik JM, Kouba T, Cusack S

PDB-6t0n:
Bat Influenza A polymerase pre-initiation complex
Method: single particle / : Wandzik JM, Kouba T, Cusack S

PDB-6t0r:
Bat Influenza A polymerase product dissociation complex using 44-mer vRNA template with mutated oligo(U) sequence
Method: single particle / : Wandzik JM, Kouba T, Cusack S

PDB-6t0s:
Bat Influenza A polymerase stuttering complex using 44-mer vRNA template with intact oligo(U) sequence
Method: single particle / : Wandzik JM, Kouba T, Cusack S

PDB-6t0u:
Bat Influenza A polymerase product dissociation complex using 44-mer vRNA template with intact oligo(U) sequence
Method: single particle / : Wandzik JM, Kouba T, Cusack S

PDB-6t0v:
Bat Influenza A polymerase elongation complex with incoming UTP analogue (complete polymerase)
Method: single particle / : Wandzik JM, Kouba T, Cusack S

PDB-6t0w:
Human Influenza B polymerase recycling complex
Method: single particle / : Wandzik JM, Kouba T, Karuppasamy M, Cusack S

PDB-6t2c:
Bat Influenza A polymerase recycling complex
Method: single particle / : Wandzik JM, Kouba T, Cusack S

PDB-6tw1:
Bat Influenza A polymerase termination complex with pyrophosphate using 44-mer vRNA template with mutated oligo(U) sequence
Method: single particle / : Wandzik JM, Kouba T, Cusack S

EMDB-4242:
Human cap-dependent 48S pre-initiation complex
Method: single particle / : Schaffitzel C

PDB-6fec:
Human cap-dependent 48S pre-initiation complex
Method: single particle / : Schaffitzel C, Schaffitzel C

EMDB-4265:
Human cap-dependent 48S pre-initiation complex
Method: single particle / : Schaffitzel C

EMDB-3896:
Cryo-EM Structure of Saccharomyces cerevisiae Target of Rapamycin Complex 2
Method: single particle / : Karuppasamy M, Kusmider B, Oliveira TM, Gaubitz C, Prouteau M, Loewith R, Schaffitzel C

PDB-6emk:
Cryo-EM Structure of Saccharomyces cerevisiae Target of Rapamycin Complex 2
Method: single particle / : Karuppasamy M, Kusmider B, Oliveira TM, Gaubitz C, Prouteau M, Loewith R, Schaffitzel C

EMDB-3506:
cryoEM structure of bacterial holo-translocon
Method: single particle / : Schaffitzel C, Botte M, Karuppasamy M, Papai G, Schultz P

PDB-5mg3:
EM fitted model of bacterial holo-translocon
Method: single particle / : Schaffitzel C, Botte M

EMDB-3065:
A network of SMG-8, SMG-9 and SMG-1 C-terminal insertion domain regulates UPF1 substrate recruitment and phosphorylation
Method: single particle / : Deniaud A, Karuppasamy M, Bock T, Masiulis S, Huard K, Garzoni F, Kerschgens K, Hentze MW, Kulozik AE, Beck M, Neu-Yilik G, Schaffitzel C

EMDB-3066:
A network of SMG-8, SMG-9 and SMG-1 C-terminal insertion domain regulates UPF1 substrate recruitment and phosphorylation
Method: single particle / : Deniaud A, Karuppasamy M, Bock T, Masiulis S, Huard K, Garzoni F, Kerschgens K, Hentze MW, Kulozik AE, Beck M, Neu-Yilik G, Schaffitzel C

EMDB-2990:
Structure of Target Of Rapapmycin Complex 2 (TORC2) from Saccharomyces cerevisiae
Method: single particle / : Gaubitz C, Oliveira TM, Prouteau M, Leitner A, Karuppasamy M, Konstantinidou G, Rispal D, Eltschinger S, Robinson GC, Thore S, Aebersold R, Schaffitzel C, Loewith R

EMDB-2917:
EM structure of ribosome-SRP-FtsY complex in "closed" state
Method: single particle / : von Loeffelholz O, Jiang Q, Ariosa A, Karuppasamy M, Huard K, Berger I, Shan S, Schaffitzel C

PDB-5aka:
EM structure of ribosome-SRP-FtsY complex in closed state
Method: single particle / : von Loeffelholz O, Jiang Q, Ariosa A, Karuppasamy M, Huard K, Berger I, Shan S, Schaffitzel C

EMDB-2316:
Structural Basis of Signal Sequence Surveillance and Selection by the SRP-SR Complex
Method: single particle / : von Loeffelholz O, Knoops K, Ariosa A, Zhang X, Karuppasamy M, Huard K, Schoehn G, Berger I, Shan SO, Schaffitzel C

PDB-3zn8:
Structural Basis of Signal Sequence Surveillance and Selection by the SRP-SR Complex
Method: single particle / : von Loeffelholz O, Knoops K, Ariosa A, Zhang X, Karuppasamy M, Huard K, Schoehn G, Berger I, Shan SO, Schaffitzel C

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more