[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 36 items for (author: kapoor & tm)

EMDB-43519:
Structure of the gamma tubulin ring complex nucleated microtubule protofilament.
Method: single particle / : Aher A, Urnavicius L, Kapoor TM

EMDB-43085:
Symmetry expanded map of 2 gamma-tubulins bound to 2 alpha tubulins in gamma tubulin ring complex capped microtubule end.
Method: single particle / : Aher A, Urnavicius L, Kapoor TM

EMDB-43481:
Density map for free recombinant gamma tubulin ring complex
Method: single particle / : Aher A, Urnavicius L, Kapoor TM

EMDB-43482:
Density map for gamma tubulin ring complex capped microtubule
Method: single particle / : Aher A, Urnavicius L, Kapoor TM

EMDB-43483:
Refined density map of gamma tubulin ring complex capped microtubule
Method: single particle / : Aher A, Urnavicius L, Kapoor TM

EMDB-23838:
Signal subtracted reconstruction of AAA2, AAA3, and AAA4 domains of dynein in the presence of a pyrazolo-pyrimidinone-based compound, Map 4
Method: single particle / : Santarossa CC, Coudray N, Urnavicius L, Ekiert DC, Bhabha G, Kapoor TM

EMDB-23841:
Yeast dynein motor domain in the presence of a pyrazolo-pyrimidinone-based compound, Map 1
Method: single particle / : Santarossa CC, Urnavicius L, Coudray N, Ekeirt DC, Bhabha G, Kapoor TM

EMDB-23842:
Signal subtracted reconstruction of AAA5 and AAA6 domains of dynein in the presence of a pyrazolo-pyrimidinone-based compound, Map 5
Method: single particle / : Santarossa CC, Coudray N, Urnavicius L, Ekiert DC, Bhabha G, Kapoor TM

EMDB-23844:
Signal subtracted reconstruction of the AAA1 domain of dynein in the presence of a pyrazolo-pyrimidinone-based compound, Map 2
Method: single particle / : Santarossa CC, Urnavicius L, Coudray N, Ekiert DC, Bhabha G, Kapoor TM

EMDB-23846:
Signal subtracted reconstruction of the AAA1 domain of dynein in the presence of a pyrazolo-pyrimidinone-based compound, Map 3
Method: single particle / : Santarossa CC, Coudray N, Urnavicius L, Ekiert DC, Bhabha G, Kapoor TM

EMDB-21063:
Density map surrounding actin-like protein in reconstruction of the native gamma-tubulin ring complex
Method: single particle / : Wieczorek M, Urnavicius L, Ti S, Molloy KR, Chait BT, Kapoor TM

EMDB-22160:
Structure of SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC
Method: single particle / : Chen J, Malone B

EMDB-21911:
Mdn1-DeltaC alone
Method: single particle / : Mickolajczyk KJ, Niu Y

EMDB-21912:
Mdn1-DeltaC plus MIDAS
Method: single particle / : Mickolajczyk KJ, Niu Y

EMDB-21984:
Structure of MZT1/GCP3-NHD and MZT1/GCP6-NHD in the gamma-TuRC lumenal bridge
Method: single particle / : Wieczorek M, Huang TL

EMDB-21985:
Structure of MZT2/GCP-NHD and CDK5Rap2 at position 13 of the gamma-TuRC
Method: single particle / : Wieczorek M, Huang TL

EMDB-21054:
Structure of gamma-tubulin in the native human gamma-tubulin ring complex
Method: single particle / : Wieczorek M, Urnavicius L

EMDB-21060:
Structures of GCP4 and GCP5 in the native human gamma-tubulin ring complex
Method: single particle / : Wieczorek M, Urnavicius L

EMDB-21067:
Structures of GCP2 and GCP3 in the native human gamma-tubulin ring complex
Method: single particle / : Wieczorek M, Urnavicius L

EMDB-21068:
Structure of GCP6 in the native human gamma-tubulin ring complex
Method: single particle / : Wieczorek M, Urnavicius L

EMDB-21069:
Desnity map of lumenal bridge in reconstruction of the native human gamma-tubulin ring complex
Method: single particle / : Wieczorek M, Urnavicius L, Ti S, Molloy KR, Chait BT, Kapoor TM

EMDB-21070:
Density map for overlap region in reconstruction of native human gamma-tubulin ring complex
Method: single particle / : Wieczorek M, Urnavicius L, Ti S, Molloy KR, Chait BT, Kapoor TM

EMDB-21073:
Structure of the native human gamma-tubulin ring complex
Method: single particle / : Wieczorek M, Urnavicius L

EMDB-21074:
Overall density map of the native human gamma-tubulin ring complex
Method: single particle / : Wieczorek M, Urnavicius L, Ti S, Molloy KR, Chait BT, Kapoor TM

EMDB-9032:
Full-length S. pombe Mdn1 in the presence of AMPPNP (ring region)
Method: single particle / : Chen Z, Suzuki H, Wang AC, DiMaio F, Walz T, Kapoor TM

EMDB-9033:
Full-length S. pombe Mdn1 in the presence of AMPPNP (tail region)
Method: single particle / : Chen Z, Suzuki H, Wang AC, DiMaio F, Walz T, Kapoor TM

EMDB-9034:
C-terminally truncated S. pombe Mdn1 (1-3911 aa) in the presence of AMPPNP (ring region)
Method: single particle / : Chen Z, Suzuki H, Wang AC, DiMaio F, Walz T, Kapoor TM

EMDB-9035:
C-terminally truncated S. pombe Mdn1 (1-3911 aa) in the presence of AMPPNP (tail region)
Method: single particle / : Chen Z, Suzuki H, Wang AC, DiMaio F, Walz T, Kapoor TM

EMDB-9036:
Full-length S. pombe Mdn1 in the presence of ATP and Rbin-1
Method: single particle / : Chen Z, Suzuki H, Wang AC, DiMaio F, Walz T, Kapoor TM

EMDB-8997:
13-pf 3-start GMPCPP-human alpha1B/beta3 microtubules decorated with kinesin-1 motor domain
Method: helical / : Ti SC, Alushin GM

EMDB-8998:
14-pf 3-start GMPCPP-human alpha1B/beta2B microtubules decorated with kinesin-1 motor domain
Method: helical / : Ti SC, Alushin GM

EMDB-8266:
Near-atomic cryo-EM structure of PRC1 bound to the microtubule
Method: helical / : Kellogg EH, Howes S

EMDB-8094:
Cryo EM density of microtubule assembled from human TUBB3
Method: helical / : Ti SC, Pamula MC

EMDB-8095:
Cryo EM density of microtubule assembled from human TUBB3-D417H mutant
Method: helical / : Ti SC, Pamula MC, Howes SC, Duellberg C, Cade NI, Kleiner RE, Forth S, Surrey T, Nogales E, Kapoor TM

EMDB-5205:
Structure of microtubule decorated with PRC1
Method: helical / : Subramanian R, Wilson-Kubalek EM, Arthur CP, Bick MJ, Campbell EA, Darst SA, Milligan RA, Kapoor TM

EMDB-5212:
Structural insights into anti-parallel microtubule crosslinking by PRC1, a conserved non-motor microtubule associated protein.
Method: helical / : Suramanian R, Wilson-Kubalek EM, Arthur CP, Bick MJ, Campbell EA, Darst SA, Milligan RA, Kapoor TM

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more