[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 821 items for (author: k. & zhang)

PDB-8xvb:
Cryo-EM structure of ATP-DNA-MuB filaments
Method: helical / : Zhao X, Zhang K, Li S

PDB-8xvc:
CryoEM structure of ADP-DNA-MuB conformation1
Method: single particle / : Zhao X, Zhang K, Li S

PDB-8xvd:
CryoEM structure of ADP-DNA-MuB conformation2
Method: single particle / : Zhao X, Zhang K, Li S

PDB-8k8v:
CryoEM structure of LonC protease hepatmer, apo state
Method: single particle / : Li M, Hsieh K, Liu H, Zhang S, Gao Y, Gong Q, Zhang K, Chang C, Li S

PDB-8k8w:
CryoEM structure of LonC protease open hexamer, apo state
Method: single particle / : Li M, Hsieh K, Liu H, Zhang S, Gao Y, Gong Q, Zhang K, Chang C, Li S

PDB-8k8x:
CryoEM of LonC open pentamer, apo state
Method: single particle / : Li M, Hsieh K, Liu H, Zhang S, Gao Y, Gong Q, Zhang K, Chang C, Li S

PDB-8k8y:
CryoEM structure of LonC heptamer in presence of AGS
Method: single particle / : Li M, Hsieh K, Liu H, Zhang S, Gao Y, Gong Q, Zhang K, Chang C, Li S

PDB-8k8z:
CryoEM structure of LonC protease hexamer in presence of AGS
Method: single particle / : Li M, Hsieh K, Liu H, Zhang S, Gao Y, Gong Q, Zhang K, Chang C, Li S

PDB-8k90:
CryoEM structure of LonC protease open pentamer in presence of AGS
Method: single particle / : Li M, Hsieh K, Liu H, Zhang S, Gao Y, Gong Q, Zhang K, Chang C, Li S

PDB-8k91:
CryoEM structure of LonC S582A hepatmer with Lysozyme
Method: single particle / : Li M, Hsieh K, Liu H, Zhang S, Gao Y, Gong Q, Zhang K, Chang C, Li S

PDB-8k92:
CryoEM structure of LonC S582A hexamer with Lysozyme
Method: single particle / : Li M, Hsieh K, Liu H, Zhang S, Gao Y, Gong Q, Zhang K, Chang C, Li S

PDB-8k93:
CryoEM structure of LonC protease S582A open hexamer with lysozyme
Method: single particle / : Li M, Hsieh K, Liu H, Zhang S, Gao Y, Gong Q, Zhang K, Chang C, Li S

PDB-8k94:
CryoEM structure of LonC protease S582A open pentamer with lysozyme
Method: single particle / : Li M, Hsieh K, Liu H, Zhang S, Gao Y, Gong Q, Zhang K, Chang C, Li S

PDB-8k95:
CryoEM structure of LonC protease open Hexamer, AGS
Method: single particle / : Li M, Hsieh K, Liu H, Zhang S, Gao Y, Gong Q, Zhang K, Chang C, Li S

PDB-8k96:
CryoEM structure of LonC protease hepatmer with Bortezomib
Method: single particle / : Li M, Hsieh K, Liu H, Zhang S, Gao Y, Gong Q, Zhang K, Chang C, Li S

PDB-8k97:
CryoEM structure of LonC protease hexamer with Bortezomib
Method: single particle / : Li M, Hsieh K, Liu H, Zhang S, Gao Y, Gong Q, Zhang K, Chang C, Li S

PDB-8xmb:
NTP-bound Pol IV transcription elongation complex
Method: single particle / : Huang K, Fang CL, Zhang Y

PDB-8xmc:
Post-translocated Pol IV transcription elongation complex
Method: single particle / : Huang K, Fang CL, Zhang Y

PDB-8xmd:
Pre-translocated Pol IV transcription elongation complex
Method: single particle / : Huang K, Fang CL, Zhang Y

PDB-8xme:
Backtracked Pol IV transcription elongation complex
Method: single particle / : Huang K, Fang CL, Zhang Y

PDB-8k58:
The cryo-EM map of close TIEA-TIC complex
Method: single particle / : Zhang KN, Liu Y, Chen M, Wang Y, Lin W, Li M, Zhang X, Gao Y, Gong Q, Chen H, Steve M, Li S, Zhang K, Liu B

PDB-8k5a:
The cryo-EM map of open TIEA-TIC complex
Method: single particle / : Zhang KN, Liu Y, Chen M, Wang Y, Lin W, Li M, Zhang X, Gao Y, Gong Q, Chen H, Steve M, Li S, Zhang K, Liu B

PDB-9bjk:
Inactive mu opioid receptor bound to Nb6, naloxone and NAM
Method: single particle / : O'Brien ES, Wang H, Kaavya Krishna K, Zhang C, Kobilka BK

PDB-8ghl:
the Hir complex core
Method: single particle / : Kim HJ, Murakami K

PDB-8ghn:
Composite model of the yeast Hir Complex with Asf1/H3/H4
Method: single particle / : Kim HJ, Murakami K

PDB-8gha:
Hir3 Arm/Tail, Hir2 WD40, C-terminal Hpc2
Method: single particle / : Kim HJ, Murakami K

PDB-8ghm:
Hir1 WD40 domains and Asf1/H3/H4
Method: single particle / : Kim HJ, Murakami K

PDB-8jvb:
Cryo-EM structure of the Type II secretion system protein from Acidithiobacillus caldus
Method: single particle / : Liu RH, Zhang K, Feng QS, Dai X, Fu Y, Li Y

PDB-8xm7:
Cryo-EM structure of the RhoG/DOCK5/ELMO1/Rac1 complex: RhoG/DOCK5/ELMO1 focused map
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

PDB-8zj2:
Cryo-EM structure of the RhoG/DOCK5/ELMO1/Rac1 complex
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

PDB-8zji:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 1)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

PDB-8zjj:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 2)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

PDB-8zjk:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 3)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

PDB-8zjl:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 4)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

PDB-8zjm:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 5)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

PDB-8ud1:
High resolution in-situ structure of complex I in respiratory supercomplex (composite)
Method: single particle / : Zheng W, Zhu J, Zhang K

PDB-8ueo:
In-situ complex I (Active-Apo)
Method: single particle / : Zheng W, Zhu J, Zhang K

PDB-8uep:
In-situ complex I, Active-Q10 (State-alpha)
Method: single particle / : Zheng W, Zhu J, Zhang K

PDB-8ueq:
In-situ complex I with Q10 (State-beta)
Method: single particle / : Zheng W, Zhu J, Zhang K

PDB-8uer:
In-situ complex I with Q10 (State-gamma)
Method: single particle / : Zheng W, Zhu J, Zhang K

PDB-8ues:
In-situ complex I, Deactive class01
Method: single particle / : Zheng W, Zhu J, Zhang K

PDB-8uet:
In-situ complex I, Deactive class02
Method: single particle / : Zheng W, Zhu J, Zhang K

PDB-8ueu:
In-situ complex I, Deactive class03
Method: single particle / : Zheng W, Zhu J, Zhang K

PDB-8uev:
In-situ complex I, Deactive class04
Method: single particle / : Zheng W, Zhu J, Zhang K

PDB-8uew:
In-situ complex I, Deactive class05
Method: single particle / : Zheng W, Zhu J, Zhang K

PDB-8uex:
In-situ complex I, Deactive class06
Method: single particle / : Zheng W, Zhu J, Zhang K

PDB-8uey:
In-situ complex I, Deactive class07
Method: single particle / : Zheng W, Zhu J, Zhang K

PDB-8uez:
In-situ complex I, Active-Q10 (State-delta)
Method: single particle / : Zheng W, Zhu J, Zhang K

PDB-8ugd:
In-situ complex III, state I
Method: single particle / : Zheng W, Zhang K, Zhu J

PDB-8uge:
In-situ complex III, state II
Method: single particle / : Zheng W, Zhang K, Zhu J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more