[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 40 items for (author: heymann & jb)

EMDB-22378:
Herpes Simplex Virus Type 1 Procapsid with Portal Vertex
Method: subtomogram averaging / : Buch MHC, Heymann JB, Newcomb WW, Winkler DC, Steven AC

EMDB-22379:
Herpes Simplex Virus Type 1 A-capsid with Portal Vertex
Method: subtomogram averaging / : Buch MHC, Heymann JB, Newcomb WW, Winkler DC, Steven AC

EMDB-22331:
SPN3US phage empty capsid
Method: single particle / : Heymann JB, Wang B, Newcomb WW, Wu W, Winkler DC, Cheng N, Reilly ER, Hsia RC, Thomas JA, Steven AC

EMDB-22332:
Phage SPN3US mottled capsid (glutaraldehyde-fixed)
Method: single particle / : Heymann JB, Wang B, Newcomb WW, Wu W, Winkler DC, Cheng N, Reilly ER, Hsia RC, Thomas JA, Steven AC

EMDB-22333:
SPN3US phage mottled capsid
Method: single particle / : Heymann JB, Wang B, Newcomb WW, Wu W, Winkler DC, Cheng N, Reilly ER, Hsia RC, Thomas JA, Steven AC

EMDB-4800:
Cryo-EM structure of the anti-feeding prophage (AFP) baseplate in extended state, 3-fold symmetrised
Method: single particle / : Desfosses A

EMDB-4802:
Cryo-EM structure of the anti-feeding prophage (AFP) helical sheath-tube complex in extended state
Method: helical / : Desfosses A

EMDB-4859:
Cryo-EM structure of the anti-feeding prophage (AFP) sheath-tube in contracted state, C6 symmetrized
Method: single particle / : Desfosses A

EMDB-4871:
Cryo-EM structure of the anti-feeding prophage (AFP) needle from signal-subtracted particles
Method: single particle / : Desfosses A

EMDB-4876:
Cryo-EM structure of the anti-feeding prophage (AFP) baseplate in contracted state
Method: single particle / : Desfosses A

EMDB-4782:
Cryo-EM structure of the anti-feeding prophage (AFP) baseplate, 6-fold symmetrised
Method: single particle / : Desfosses A

EMDB-4783:
Composite map of an entire contractile injection device : the anti-feeding prophage (AFP)
Method: single particle / : Desfosses A

EMDB-4784:
Cryo-EM structure of the anti-feeding prophage cap (AFP tube terminating cap)
Method: single particle / : Desfosses A

EMDB-4801:
Cryo-EM structure of the anti-feeding prophage cap (AFP tube terminating cap), ending with Afp3
Method: single particle / : Desfosses A

EMDB-4803:
Cryo-EM structure of the anti-feeding prophage (AFP) helical sheath in contracted state
Method: helical / : Desfosses A

EMDB-7907:
Two retinoschisin molecules interacting laterally forming a unit cell of a filamentous strand.
Method: single particle / : Heymann JB, Vijayasarathy C, Huang RK, Dearborn AD, Sieving PA, Steven AC

EMDB-8607:
Herpes Simplex Virion Primary Enveloped Virion
Method: single particle / : Fontana J, Newcomb WW, Winkler DC, Cheng N, Heymann JB, Steven AC

EMDB-6439:
Helical cryo-EM reconstruction of HIV Rev filament
Method: helical / : DiMattia MA, Watts NR, Cheng N, Huang R, Heymann JB, Wingfield PT, Grimes JM, Stuart DI, Steven AC

EMDB-6425:
Retinoschisin, back-to-back octameric rings
Method: single particle / : Heymann JB, Tolun G, Vijayasarathy C, Huang R, Zeng Y, Li Y, Steven AC, Sieving PA

EMDB-6482:
Cryo-electron microscopy of alpha Synuclein amyloid fibrils
Method: helical / : Dearborn AD, Wall JS, Cheng N, Heymann JB, Kajava AV, Varkey J, Langen R, Steven AC

EMDB-5917:
Encapsulin protein (EncA) from Myxococcus xanthus
Method: single particle / : McHugh CA, Fontana J, Lam AS, Cheng N, Aksyuk AA, Steven AC, Hoiczyk E

EMDB-5953:
Cryo-electron microscopy of iron-core lacking encapsulin nanocompartments from Myxococcus xanthus
Method: single particle / : McHugh CA, Fontana J, Nemecek D, Cheng N, Aksyuk AA, Heymann JB, Winkler DC, Lam AS, Wall JS, Steven AC, Hoiczyk E

EMDB-5772:
A Two-Pronged Structural Analysis of Retroviral Maturation Indicates that Core Formation Proceeds by a Disassembly-Reassembly Pathway Rather than a Displacive Transition
Method: single particle / : Keller PW, Huang RK, England M, Waki K, Cheng N, Heymann JB, Craven RC, Freed EO, Steven AC

EMDB-5773:
A Two-Pronged Structural Analysis of Retroviral Maturation Indicates that Core Formation Proceeds by a Disassembly-Reassembly Pathway Rather than a Displacive Transition
Method: single particle / : Keller PW, Huang RK, England M, Waki K, Cheng N, Heymann JB, Craven RC, Freed EO, Steven AC

EMDB-5774:
A Two-Pronged Structural Analysis of Retroviral Maturation Indicates that Core Formation Proceeds by a Disassembly-Reassembly Pathway Rather than a Displacive Transition
Method: single particle / : Keller PW, Huang RK, England M, Waki K, Cheng N, Heymann JB, Craven RC, Freed EO, Steven AC

EMDB-2364:
CryoEM reconstruction of the bacteriophage phi6 procapsid to the near-atomic resolution
Method: single particle / : Nemecek D, Boura E, Wu W, Cheng N, Plevka P, Qiao J, Mindich L, Heymann JB, Hurley JH, Steven AC

EMDB-2419:
3-dimensional structure of the toxin-delivery particle antifeeding prophage of Serratia entomophila
Method: single particle / : Heymann JB, Bartho JD, Rybakova D, Venugopal HP, Winkler DC, Sen A, Hurst MRH, Mitra AK

EMDB-2423:
3-dimensional structure of the toxin-delivery particle antifeeding prophage of Serratia entomophila
Method: single particle / : Heymann JB, Bartho JD, Rybakova D, Venugopal HP, Winkler DC, Sen A, Hurst MRH, Mitra AK

EMDB-2341:
Bacteriophage phi6 procapsids with different composition of accessory proteins
Method: single particle / : Nemecek D, Qiao J, Mindich L, Steven AC, Heymann JB

EMDB-2342:
Bacteriophage phi6 procapsids with different composition of accessory proteins
Method: single particle / : Nemecek D, Qiao J, Mindich L, Steven AC, Heymann JB

EMDB-2344:
Bacteriophage phi6 procapsids with different composition of accessory proteins
Method: single particle / : Nemecek D, Qiao J, Mindich L, Steven AC, Heymann JB

EMDB-2346:
Bacteriophage phi6 procapsids with different composition of accessory proteins
Method: single particle / : Nemecek D, Qiao J, Mindich L, Steven AC, Heymann JB

EMDB-5355:
Expansion Intermediates of the Bacteriophage phi6 Procapsid
Method: single particle / : Nemecek D, Cheng N, Qiao J, Mindich L, Steven AC, Heymann JB

EMDB-5356:
Expansion Intermediates of the Bacteriophage phi6 Procapsid
Method: single particle / : Nemecek D, Cheng N, Qiao J, Mindich L, Steven AC, Heymann JB

EMDB-5357:
Expansion Intermediates of the Bacteriophage phi6 Procapsid
Method: single particle / : Nemecek D, Cheng N, Qiao J, Mindich L, Steven AC, Heymann JB

EMDB-5358:
RNA-packaged Capsid of Bacteriophage phi6
Method: single particle / : Nemecek D, Cheng N, Qiao J, Mindich L, Steven AC, Heymann JB

EMDB-1500:
Initial location of the RNA-dependent RNA polymerase in the bacteriophage phi6 procapsid determined by cryo-electron microscopy
Method: single particle / : Sen A, Heymann JB, Cheng N, Qiao J, Mindich L, Steven AC

EMDB-1501:
Initial location of the RNA-dependent RNA polymerase in the bacteriophage phi6 procapsid determined by cryo-electron microscopy
Method: single particle / : Sen A, Heymann JB, Cheng N, Qiao J, Mindich L, Steven AC

EMDB-1502:
Initial location of the RNA-dependent RNA polymerase in the bacteriophage phi6 procapsid determined by cryo-electron microscopy
Method: single particle / : Sen A, Heymann JB, Cheng N, Qiao J, Mindich L, Steven AC

EMDB-1503:
Initial location of the RNA-dependent RNA polymerase in the bacteriophage phi6 procapsid determined by cryo-electron microscopy
Method: single particle / : Sen A, Heymann JB, Cheng N, Qiao J, Mindich L, Steven AC

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more