[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 138 items for (author: harris & ak)

EMDB-18381:
UFL1 E3 ligase bound 60S ribosome
Method: single particle / : Makhlouf L, Zeqiraj E, Kulathu Y

EMDB-18382:
UFL1 E3 ligase bound 60S ribosome
Method: single particle / : Makhlouf L, Kulathu Y, Zeqiraj E

PDB-8qfc:
UFL1 E3 ligase bound 60S ribosome
Method: single particle / : Makhlouf L, Zeqiraj E, Kulathu Y

PDB-8qfd:
UFL1 E3 ligase bound 60S ribosome
Method: single particle / : Makhlouf L, Kulathu Y, Zeqiraj E

EMDB-35304:
Cryo-EM structure of the yeast SPT-ORM2 (ORM2-S3A) complex
Method: single particle / : Xie T, Gong X

EMDB-35306:
Cryo-EM structure of the yeast SPT-ORM2 (ORM2-S3A-N71A) complex
Method: single particle / : Xie T, Gong X

EMDB-35310:
Cryo-EM structure of the yeast SPT-ORM2 (ORM2-S3D) complex
Method: single particle / : Xie T, Gong X

PDB-8iaj:
Cryo-EM structure of the yeast SPT-ORM2 (ORM2-S3A) complex
Method: single particle / : Xie T, Gong X

PDB-8iak:
Cryo-EM structure of the yeast SPT-ORM2 (ORM2-S3A-N71A) complex
Method: single particle / : Xie T, Gong X

PDB-8iam:
Cryo-EM structure of the yeast SPT-ORM2 (ORM2-S3D) complex
Method: single particle / : Xie T, Gong X

EMDB-42149:
S1V2-72 Fab bound to EHA2 from influenza B/Malaysia/2506/2004
Method: single particle / : Finney J, Kong S, Walsh Jr RM, Harrison SC, Kelsoe G

PDB-8udg:
S1V2-72 Fab bound to EHA2 from influenza B/Malaysia/2506/2004
Method: single particle / : Finney J, Kong S, Walsh Jr RM, Harrison SC, Kelsoe G

EMDB-41617:
CryoEM structure of PI3Kalpha
Method: single particle / : Valverde R, Shi H, Holliday M, Sun M

PDB-8tu6:
CryoEM structure of PI3Kalpha
Method: single particle / : Valverde R, Shi H, Holliday M

EMDB-41140:
APC/C-CDH1-UBE2C-Ubiquitin-CyclinB-NTD
Method: single particle / : Bodrug T, Welsh KA, Bolhuis DL, Paulakonis E, Martinez-Chacin RC, Liu B, Pinkin N, Bonacci T, Cui L, Xu P, Roscow O, Amann SJ, Grishkovskaya I, Emanuele MJ, Harrison JS, Steimel JP, Hahn KM, Zhang W, Zhong E, Haselbach D, Brown NG

EMDB-41142:
APC/C-CDH1-UBE2C-UBE2S-Ubiquitin-CyclinB
Method: single particle / : Bodrug T, Welsh KA, Bolhuis DL, Paulakonis E, Martinez-Chacin RC, Liu B, Pinkin N, Bonacci T, Cui L, Xu P, Roscow O, Amann SJ, Grishkovskaya I, Emanuele MJ, Harrison JS, Steimel JP, Hahn KM, Zhang W, Zhong E, Haselbach D, Brown NG

PDB-8tar:
APC/C-CDH1-UBE2C-Ubiquitin-CyclinB-NTD
Method: single particle / : Bodrug T, Welsh KA, Bolhuis DL, Paulakonis E, Martinez-Chacin RC, Liu B, Pinkin N, Bonacci T, Cui L, Xu P, Roscow O, Amann SJ, Grishkovskaya I, Emanuele MJ, Harrison JS, Steimel JP, Hahn KM, Zhang W, Zhong E, Haselbach D, Brown NG

PDB-8tau:
APC/C-CDH1-UBE2C-UBE2S-Ubiquitin-CyclinB
Method: single particle / : Bodrug T, Welsh KA, Bolhuis DL, Paulakonis E, Martinez-Chacin RC, Liu B, Pinkin N, Bonacci T, Cui L, Xu P, Roscow O, Amann SJ, Grishkovskaya I, Emanuele MJ, Harrison JS, Steimel JP, Hahn KM, Zhang W, Zhong E, Haselbach D, Brown NG

EMDB-28910:
Glycan-Base ConC Env Trimer
Method: single particle / : Olia AS, Kwong PD

PDB-8f7t:
Glycan-Base ConC Env Trimer
Method: single particle / : Olia AS, Kwong PD

EMDB-27232:
Subtomogram of Fluad vaccine hemagglutinin spiked nanodisc
Method: electron tomography / : Gallagher JR, Audray AK

EMDB-27233:
Tomogram of Flublok vaccine hemagglutinin starfish complexes
Method: electron tomography / : Gallagher JR, Audray AK

EMDB-26520:
Post-fusion ectodomain of HSV-1 gB in complex with BMPC-23 Fab
Method: single particle / : Windsor IW, Kong SL, Garforth SJ, Almo SC, Harrison SC

EMDB-26521:
Post-fusion ectodomain of HSV-1 gB in complex with HSV010-13 Fab
Method: single particle / : Windsor IW, Kong SL, Garforth SJ, Almo SC, Harrison SC

PDB-7uhz:
Post-fusion ectodomain of HSV-1 gB in complex with BMPC-23 Fab
Method: single particle / : Windsor IW, Kong SL, Garforth SJ, Almo SC, Harrison SC

PDB-7ui0:
Post-fusion ectodomain of HSV-1 gB in complex with HSV010-13 Fab
Method: single particle / : Windsor IW, Kong SL, Garforth SJ, Almo SC, Harrison SC

EMDB-26044:
H10ssF: ferritin-based nanoparticle displaying H10 hemagglutinin stabilized stem epitopes
Method: single particle / : Gallagher JR, Harris AK

EMDB-14531:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11 nanobody complex
Method: single particle / : Weckener M, Naismith JH, Vogirala VK

EMDB-14539:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H6 nanobody complex
Method: single particle / : Weckener M, Naismith JH

EMDB-14543:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-B5 nanobody complex
Method: single particle / : Weckener M, Naismith JH

EMDB-14544:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 1Up2Down conformation
Method: single particle / : Weckener M, Naismith JH

EMDB-14575:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-A10 nanobody complex
Method: single particle / : Weckener M, Naismith JH

EMDB-14576:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 2Up1Down conformation
Method: single particle / : Weckener M, Naismith JH

PDB-7z6v:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11 nanobody complex
Method: single particle / : Weckener M, Naismith JH, Vogirala VK

PDB-7z7x:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H6 nanobody complex
Method: single particle / : Weckener M, Naismith JH

PDB-7z85:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-B5 nanobody complex
Method: single particle / : Weckener M, Naismith JH

PDB-7z86:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 1Up2Down conformation
Method: single particle / : Weckener M, Naismith JH

PDB-7z9q:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-A10 nanobody complex
Method: single particle / : Weckener M, Naismith JH

PDB-7z9r:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 2Up1Down conformation
Method: single particle / : Weckener M, Naismith JH

EMDB-14153:
SARS-CoV-2 Spike, C3 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

PDB-7qus:
SARS-CoV-2 Spike, C3 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

EMDB-14152:
SARS-CoV-2 Spike with ethylbenzamide-tri-iodo Siallyllactose, C3 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

EMDB-14154:
SARS-CoV-2 Spike with ethylbenzamide-tri-iodo Siallyllactose, C1 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

EMDB-14155:
SARS-CoV-2 Spike, C1 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

PDB-7qur:
SARS-CoV-2 Spike with ethylbenzamide-tri-iodo Siallyllactose, C3 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

EMDB-25692:
The 6.1 angstrom cryoEM map of calprotectin bound to TdfH
Method: single particle / : Bera A, Noinaj N

EMDB-13142:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation without nucleotides
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

EMDB-13143:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

EMDB-13144:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP and rhodamine 6G
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

EMDB-13145:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in outward-facing conformation with ADP-orthovanadate/ATP
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more