[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 166 items for (author: han & yw)

PDB-8fu3:
Structure Of Respiratory Syncytial Virus Polymerase with Novel Non-Nucleoside Inhibitor
Method: single particle / : Yu X, Abeywickrema P, Bonneux B, Behera I, Jacoby E, Fung A, Adhikary S, Bhaumik A, Carbajo RJ, Bruyn SD, Miller R, Patrick A, Pham Q, Piassek M, Verheyen N, Shareef A, Sutto-Ortiz P, Ysebaert N, Vlijmen HV, Jonckers THM, Herschke F, McLellan JS, Decroly E, Fearns R, Grosse S, Roymans D, Sharma S, Rigaux P, Jin Z

EMDB-29753:
Tomogram of an apical end of a Toxoplasma Gondii tachyzoite displaying an extruded conoid
Method: electron tomography / : Martinez M, Chang YW, Mageswaran SK

EMDB-29754:
Cryptosporidium parvum sporozoite apical end
Method: electron tomography / : Martinez M, Chang YW, Mageswaran SK

EMDB-29755:
Cryptosporidium parvum sporozoite basal end
Method: electron tomography / : Martinez M, Chang YW, Mageswaran SK

EMDB-29784:
Subtomogram average of the preconoidal rings from Cryptosporidium parvum sporozoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29791:
Refined subtomogram average of the top preconoidal ring from Cryptosporidium parvum sporozoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29801:
Refined subtomogram average of the bottom preconoidal ring from Cryptosporidium parvum sporozoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29808:
Subtomogram average of the IMC surface filaments, top view, from Cryptosporidium parvum sporozoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29809:
IMC surface filament, sawtooth conformation, from Cryptosporidium parvum sporozoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29810:
IMC surface filament, side view, from Cryptosporidium parvum sporozoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29826:
Upper preconoidal ring from Toxoplasma gondii tachyzoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29827:
Lower preconoidal ring of Toxoplasma gondii tachyzoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29832:
Preconoidal rings of Toxoplasma gondii tachyzoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29835:
Basal IMC pore of Cryptosporidium parvum sporozoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29838:
Preconoidal rings of Toxoplasma gondii tachyzoites with Formin1 conditionally depleted
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29839:
Upper preconoidal ring of Toxoplasma gondii tachyzoites with Formin1 conditionally depleted
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29840:
Lower preconoidal ring from Toxoplasma gondii tachyzoites with Formin1 conditionally depleted
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-34190:
Structure of X18 UFO protomer in complex with F6 Fab VHVL domain
Method: single particle / : Niu J, Xu YW, Yang B

EMDB-34192:
HIV-1 Env X18 UFO in complex with F6 Fab
Method: single particle / : Niu J, Xu YW, Yang B

EMDB-34193:
HIV-1 Env X18 UFO in complex with 8ANC195 Fab
Method: single particle / : Niu J, Xu YW, Yang B

EMDB-34194:
HIV-1 Env X16 UFO in complex with 8ANC195 Fab
Method: single particle / : Niu J, Xu YW, Yang B

EMDB-35598:
cryo-EM structure of the middle part of the shrimp white spot syndrome virus nucleocapsid (wide type)
Method: single particle / : Huang HJ, Wang HC, Chen LL

EMDB-35600:
Cryo-Em structure of the middle part of the shrimp white spot syndrome virus nucleocapsid (narrow type)
Method: single particle / : Huang HJ, Wang HC

EMDB-27871:
CryoEM structure of yeast Arginyltransferase 1 (ATE1)
Method: single particle / : Huang W, Zhang Y, Taylor DJ

EMDB-29638:
CryoEM structure of yeast Arginyltransferase 1 (ATE1)
Method: single particle / : Huang W, Zhang Y, Taylor DJ

EMDB-40043:
Unsupervised detection of 70S ribosome from Mycoplasma pneumoniae
Method: subtomogram averaging / : Zeng X

EMDB-40087:
Unsupervised detection of TRiC in Rattus norvegicus neuron
Method: subtomogram averaging / : Zeng X

EMDB-40089:
Unsupervised detection of ribosome in Rattus neuron
Method: subtomogram averaging / : Zeng X

EMDB-40090:
Unsupervised detection of proteasome in Rattus neuron
Method: subtomogram averaging / : Zeng X

EMDB-28915:
SIRT6 bound to an H3K9Ac nucleosome
Method: single particle / : Markert J, Whedon S, Wang Z, Cole P, Farnung L

PDB-8f86:
SIRT6 bound to an H3K9Ac nucleosome
Method: single particle / : Markert J, Whedon S, Wang Z, Cole P, Farnung L

EMDB-26547:
Mediator-PIC Early (Tail A + Upstream DNA & Activator)
Method: single particle / : Gorbea Colon JJ, Chen SF, Tsai KL, Murakami K

EMDB-26551:
Mediator-PIC Early (Composite Model)
Method: single particle / : Gorbea Colon JJ, Chen SF, Tsai KL, Murakami K

EMDB-26542:
Core Mediator-PICearly (Copy A)
Method: single particle / : Gorbea Colon JJ, Chen SF, Tsai KL, Murakami K

EMDB-26543:
Mediator-PIC Early (Tail A)
Method: single particle / : Gorbea Colon JJ, Chen SF, Tsai KL, Murakami K

EMDB-26544:
Mediator-PIC Early (Core B)
Method: single particle / : Gorbea Colon JJ, Chen SF, Tsai KL, Murakami K

EMDB-26545:
Mediator-PIC Early (Mediator A)
Method: single particle / : Gorbea Colon JJ, Chen SF, Tsai KL, Murakami K

EMDB-26548:
Mediator-PIC Early (Tail A/B Dimer)
Method: single particle / : Gorbea Colon JJ, Chen SF, Tsai KL, Murakami K

EMDB-28023:
Dimerized Mediator-PIC with early GTFs and TFIIE on a divergent promoter
Method: subtomogram averaging / : Palao III L

EMDB-28024:
Dimerized Mediator PIC with early GTFs on a divergent promoter
Method: subtomogram averaging / : Palao III L

EMDB-14866:
VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=4 VLP)
Method: single particle / : Kingston NJ, Grehan K, Snowden JS, Alzahrani J, Ranson NA, Rowlands DJ, Stonehouse NJ

EMDB-14868:
VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=3* VLP)
Method: single particle / : Kingston NJ, Grehan K, Snowden JS, Alzahrani J, Ranson NA, Rowlands DJ, Stonehouse NJ

PDB-7zq8:
VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=4 VLP)
Method: single particle / : Kingston NJ, Grehan K, Snowden JS, Alzahrani J, Ranson NA, Rowlands DJ, Stonehouse NJ

PDB-7zqa:
VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=3* VLP)
Method: single particle / : Kingston NJ, Grehan K, Snowden JS, Alzahrani J, Ranson NA, Rowlands DJ, Stonehouse NJ

EMDB-34585:
Molecular recognition of two endogenous hormones by the human parathyroid hormone receptor-1
Method: single particle / : Zhao L, Xu HE, Yuan Q

EMDB-34587:
PTHrP-PTH1R-Gs complex
Method: single particle / : Zhao L, Xu HE, Yuan Q

EMDB-34598:
Human parathyroid hormone receptor-1 dimer
Method: single particle / : Zhao L, Xu HE, Yuan Q

EMDB-14777:
Cryo-EM structure of archaic chaperone-usher Csu pilus of Acinetobacter baumannii
Method: helical / : Pakharukova N, Malmi H, Tuittila M, Paavilainen S, Ghosal D, Chang YW, Jensen GJ, Zavialov AV

EMDB-25702:
Flagellar motor of Hylemonella gracilis
Method: subtomogram averaging / : Kaplan M, Oikonomou CM, Wood CR, Chreifi G, Subramanian P, Ortega DR, Chang YW, Beeby M, Shaffer LS, Jensen GJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more