[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 32 items for (author: green, & r.)

PDB-8r55:
Bacillus subtilis MutS2-collided disome complex (collided 70S)
Method: single particle / : Park E, Mackens-Kiani T, Berhane R, Esser H, Erdenebat C, Burroughs AM, Berninghausen O, Aravind L, Beckmann R, Green R, Buskirk AR

PDB-8qpp:
Bacillus subtilis MutS2-collided disome complex (stalled 70S)
Method: single particle / : Park E, Mackens-Kiani T, Berhane R, Esser H, Erdenebat C, Burroughs AM, Berninghausen O, Aravind L, Beckmann R, Green R, Buskirk AR

PDB-7t4q:
CryoEM structure of the HCMV Pentamer gH/gL/UL128/UL130/UL131A in complex with neutralizing fabs 2C12, 7I13 and 13H11
Method: single particle / : Kschonsak M, Johnson MC, Schelling R, Green EM, Rouge L, Ho H, Patel N, Kilic C, Kraft E, Arthur CP, Rohou AL, Comps-Agrar L, Martinez-Martin N, Perez L, Payandeh J, Ciferri C

PDB-7t4r:
CryoEM structure of the HCMV Pentamer gH/gL/UL128/UL130/UL131A in complex with THBD and neutralizing fabs MSL-109 and 13H11
Method: single particle / : Kschonsak M, Johnson MC, Schelling R, Green EM, Rouge L, Ho H, Patel N, Kilic C, Kraft E, Arthur CP, Rohou AL, Comps-Agrar L, Martinez-Martin N, Perez L, Payandeh J, Ciferri C

PDB-7t4s:
CryoEM structure of the HCMV Pentamer gH/gL/UL128/UL130/UL131A in complex with NRP2 and neutralizing fabs 8I21 and 13H11
Method: single particle / : Kschonsak M, Johnson MC, Schelling R, Green EM, Rouge L, Ho H, Patel N, Kilic C, Kraft E, Arthur CP, Rohou AL, Comps-Agrar L, Martinez-Martin N, Perez L, Payandeh J, Ciferri C

PDB-7nri:
Structure of the darobactin-bound E. coli BAM complex (BamABCDE)
Method: single particle / : Jakob RP, Kaur H, Marzinek JK, Green R, Imai Y, Bolla J, Robinson C, Bond PJ, Lewis K, Maier T, Hiller S

PDB-7lix:
CaRSP1 and scaffolded phycoerythrin beta subunits from the phycobilisome of Porphyridium purpureum
Method: single particle / : Rathbone HW, Landsberg MJ, Michie KA, Green BR, Curmi PMG

PDB-7liy:
CaRSP2 and scaffolded phycoerythrin beta subunits from the phycobilisome of Porphyridium purpureum
Method: single particle / : Rathbone HW, Landsberg MJ, Michie KA, Green BR, Curmi PMG

PDB-7liz:
LR6 rod linker and scaffolded phycoerythrin beta subunits from the phycobilisome of Porphyridium purpureum
Method: single particle / : Rathbone HW, Landsberg MJ, Michie KA, Green BR, Curmi PMG

PDB-7lj0:
Linker 3 and scaffolded phycoerythrin beta subunit from the phycobilisome of Porphyridium purpureum
Method: single particle / : Rathbone HW, Landsberg MJ, Michie KA, Green BR, Curmi PMG

PDB-7b7d:
Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
Method: single particle / : Ranjan N, Pochopien AA, Wu CC, Beckert B, Blanchet S, Green R, Rodnina MV, Wilson DN

PDB-6e1k:
Structure of AtTPC1(DDE) reconstituted in saposin A with cat06 Fab
Method: single particle / : Kintzer AF, Green EM, Cheng Y, Stroud RM

PDB-6e1m:
Structure of AtTPC1(DDE) reconstituted in saposin A
Method: single particle / : Kintzer AF, Green EM, Cheng Y, Stroud RM

PDB-6e1n:
Structure of AtTPC1(DDE) in state 1
Method: single particle / : Kintzer AF, Green EM, Cheng Y, Stroud RM

PDB-6e1p:
Structure of AtTPC1(DDE) in state 2
Method: single particle / : Kintzer AF, Green EM, Cheng Y, Stroud RM

PDB-5ftj:
Cryo-EM structure of human p97 bound to UPCDC30245 inhibitor
Method: single particle / : Banerjee S, Bartesaghi A, Merk A, Rao P, Bulfer SL, Yan Y, Green N, Mroczkowski B, Neitz RJ, Wipf P, Falconieri V, Deshaies RJ, Milne JLS, Huryn D, Arkin M, Subramaniam S

PDB-5ftk:
Cryo-EM structure of human p97 bound to ADP
Method: single particle / : Banerjee S, Bartesaghi A, Merk A, Rao P, Bulfer SL, Yan Y, Green N, Mroczkowski B, Neitz RJ, Wipf P, Falconieri V, Deshaies RJ, Milne JLS, Huryn D, Arkin M, Subramaniam S

PDB-5ftl:
Cryo-EM structure of human p97 bound to ATPgS (Conformation I)
Method: single particle / : Banerjee S, Bartesaghi A, Merk A, Rao P, Bulfer SL, Yan Y, Green N, Mroczkowski B, Neitz RJ, Wipf P, Falconieri V, Deshaies RJ, Milne JLS, Huryn D, Arkin M, Subramaniam S

PDB-5ftm:
Cryo-EM structure of human p97 bound to ATPgS (Conformation II)
Method: single particle / : Banerjee S, Bartesaghi A, Merk A, Rao P, Bulfer SL, Yan Y, Green N, Mroczkowski B, Neitz RJ, Wipf P, Falconieri V, Deshaies RJ, Milne JLS, Huryn D, Arkin M, Subramaniam S

PDB-5ftn:
Cryo-EM structure of human p97 bound to ATPgS (Conformation III)
Method: single particle / : Banerjee S, Bartesaghi A, Merk A, Rao P, Bulfer SL, Yan Y, Green N, Mroczkowski B, Neitz RJ, Wipf P, Falconieri V, Deshaies RJ, Milne JLS, Huryn D, Arkin M, Subramaniam S

PDB-4crm:
Cryo-EM of a pre-recycling complex with eRF1 and ABCE1
Method: single particle / : Preis A, Heuer A, Barrio-Garcia C, Hauser A, Eyler D, Berninghausen O, Green R, Becker T, Beckmann R

PDB-4crn:
Cryo-EM of a pretermination complex with eRF1 and eRF3
Method: single particle / : Preis A, Heuer A, Barrio-Garcia C, Hauser A, Eyler D, Berninghausen O, Green R, Becker T, Beckmann R

PDB-4v6n:
Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)
Method: single particle / : Agirrezabala X, Liao H, Schreiner E, Fu J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-4v6o:
Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)
Method: single particle / : Agirrezabala X, Liao H, Schreiner E, Fu J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-4v6p:
Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)
Method: single particle / : Agirrezabala X, Liao H, Schreiner E, Fu J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-4v6q:
Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)
Method: single particle / : Agirrezabala X, Liao H, Schreiner E, Fu J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-4v6r:
Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)
Method: single particle / : Agirrezabala X, Liao H, Schreiner E, Fu J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-4v6s:
Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)
Method: single particle / : Agirrezabala X, Liao H, Schreiner E, Fu J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-4v6k:
Structural insights into cognate vs. near-cognate discrimination during decoding.
Method: single particle / : Agirrezabala X, Schreiner E, Trabuco LG, Lei J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-4v6l:
Structural insights into cognate vs. near-cognate discrimination during decoding.
Method: single particle / : Agirrezabala X, Schreiner E, Trabuco LG, Lei J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-3j15:
Model of ribosome-bound archaeal Pelota and ABCE1
Method: single particle / : Becker T, Franckenberg S, Wickles S, Shoemaker CJ, Anger AM, Armache JP, Sieber H, Ungewickell C, Berninghausen O, Daberkow I, Karcher A, Thomm M, Hopfner KP, Green R, Beckmann R

PDB-3j16:
Models of ribosome-bound Dom34p and Rli1p and their ribosomal binding partners
Method: single particle / : Becker T, Franckenberg S, Wickles S, Shoemaker CJ, Anger AM, Armache JP, Sieber H, Ungewickell C, Berninghausen O, Daberkow I, Karcher A, Thomm M, Hopfner KP, Green R, Beckmann R

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more