[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,485 items for (author: gil & d)

EMDB-41542:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 3-3 at week 4
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-44246:
Cryo-EM structure of HIV-1 JRFL v6 Env in complex with vaccine-elicited, Membrane Proximal External Region (MPER) directed antibody DH1317.4.
Method: single particle / : Acharya P, Parsons R, Janowska K, Williams WB, Alam M, Haynes BF

EMDB-41578:
mGluR3 class 1 in the presence of the antagonist LY 341495
Method: single particle / : Strauss A, Levitz J

EMDB-45242:
mGluR3 in the presence of the antagonist LY 341495 and positive allosteric modulator VU6023326 class 2
Method: single particle / : Strauss A, Levitz J

PDB-8trd:
mGluR3 class 1 in the presence of the antagonist LY 341495
Method: single particle / : Strauss A, Levitz J

EMDB-42400:
RORC mRNA 3'UTR riboswitch A97G/G98A mutant class C
Method: single particle / : Asarnow D, Khoroshkin M, Goodarzi H, Cheng Y

EMDB-42401:
RORC mRNA 3'UTR riboswitch 77-GA mutant class A
Method: single particle / : Asarnow D, Khoroshkin M, Goodarzi H, Cheng Y

EMDB-42403:
RORC mRNA 3'UTR riboswitch 117-AC mutant class C
Method: single particle / : Asarnow D, Khoroshkin M, Goodarzi H, Cheng Y

EMDB-42404:
RORC mRNA 3'UTR riboswitch 117-AC mutant class B
Method: single particle / : Asarnow D, Khoroshkin M, Goodarzi H, Cheng Y

EMDB-41501:
mGluR3 in the presence of the agonist LY379268 and PAM VU6023326
Method: single particle / : Strauss A, Levitz J

EMDB-41567:
Metabotropic glutamate receptor 3 class 3 bound to antagonist LY 341495
Method: single particle / : Strauss A, Levitz J

EMDB-41568:
mGluR3 in the presence of the agonist LY379268
Method: single particle / : Strauss A, Levitz J

EMDB-41577:
mGluR3 in the presence of the antagonist LY 341495 and positive allosteric modulator VU6023326
Method: single particle / : Strauss A, Levitz J

EMDB-44861:
metabotropic glutamate receptor subtype three bound to the antagonist LY 341495, class two
Method: single particle / : Strauss A, Levitz J

PDB-8tqb:
mGluR3 in the presence of the agonist LY379268 and PAM VU6023326
Method: single particle / : Strauss A, Levitz J

PDB-8tr0:
Metabotropic glutamate receptor 3 class 3 bound to antagonist LY 341495
Method: single particle / : Strauss A, Levitz J

PDB-8tr2:
mGluR3 in the presence of the agonist LY379268
Method: single particle / : Strauss A, Levitz J

PDB-8trc:
mGluR3 in the presence of the antagonist LY 341495 and positive allosteric modulator VU6023326
Method: single particle / : Strauss A, Levitz J

EMDB-16825:
Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6)
Method: single particle / : Yi G, Ye M, Gilbert RJ

EMDB-17084:
Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6) bound with pre-let7g miRNA and UTPalphaS
Method: single particle / : Yi G, Ye M, Gilbert RJ

EMDB-17086:
Human terminal uridylyltransferase 7 (TUT7/ZCCHC6) bound with pre-let7g miRNA and Lin28A - complex 1
Method: single particle / : Yi G, Ye M, Gilbert RJ

EMDB-17087:
Human terminal uridylyltransferase 7 (TUT7/ZCCHC6) bound with pre-let7g miRNA and Lin28A - complex 2
Method: single particle / : Yi G, Ye M, Gilbert RJ

PDB-8oef:
Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6)
Method: single particle / : Yi G, Ye M, Gilbert RJ

PDB-8opp:
Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6) bound with pre-let7g miRNA and UTPalphaS
Method: single particle / : Yi G, Ye M, Gilbert RJ

PDB-8ops:
Human terminal uridylyltransferase 7 (TUT7/ZCCHC6) bound with pre-let7g miRNA and Lin28A - complex 1
Method: single particle / : Yi G, Ye M, Gilbert RJ

PDB-8opt:
Human terminal uridylyltransferase 7 (TUT7/ZCCHC6) bound with pre-let7g miRNA and Lin28A - complex 2
Method: single particle / : Yi G, Ye M, Gilbert RJ

EMDB-18990:
CryoEM map of tau PHF sarkosyl-extracted from a human AD patient (associated with in situ tomography)
Method: helical / : Wilkinson MW, Gilbert MAG, Fatima N, Jenkins J, O'Sullivan TJ, Schertel A, Halfon Y, Morrema THJ, Geibel M, Ranson NA, Radford SE, Hoozemans JJM, Frank RAW

EMDB-18180:
cryoEM structure of SARS-CoV2 Spike trimer in complex with Fab23
Method: single particle / : Hallberg M, Das H

PDB-8q5y:
cryoEM structure of SARS-CoV2 Spike trimer in complex with Fab23
Method: single particle / : Hallberg M, Das H

EMDB-17164:
Structure of human terminal uridylyltransferase 4 (TUT4, ZCCHC11) in complex with pre-let7g miRNA and Lin28A
Method: single particle / : Gilbert RJ, Yi G, Ye M

PDB-8ost:
Structure of human terminal uridylyltransferase 4 (TUT4, ZCCHC11) in complex with pre-let7g miRNA and Lin28A
Method: single particle / : Gilbert RJ, Yi G, Ye M

EMDB-43144:
MicroED structure of SARS-CoV-2 main protease (MPro/3CLPro) with missing cone eliminated by suspended drop
Method: electron crystallography / : Bu G, Gillman C, Danelius E, Hattne J, Nannenga BL, Gonen T

PDB-8vd7:
MicroED structure of SARS-CoV-2 main protease (MPro/3CLPro) with missing cone eliminated by suspended drop
Method: electron crystallography / : Bu G, Gillman C, Danelius E, Hattne J, Nannenga BL, Gonen T

EMDB-50148:
Tau PHF subtomogram average relating to CS1 extended data Figure 9A
Method: subtomogram averaging / : Jenkins J

EMDB-50152:
Tau PHF subtomogram average relating to CS2 Figure 3i-j.
Method: subtomogram averaging / : Jenkins J

EMDB-50153:
Tau PHF subtomogram average relating to CS3 extended data Figure 9c
Method: subtomogram averaging / : Jenkins J

EMDB-50155:
Tau PHF subtomogram average relating to CS4 extended data Figure 9d
Method: subtomogram averaging / : Jenkins J

EMDB-50156:
Tau PHF subtomogram average relating to CS5 extended data Figure 9b
Method: subtomogram averaging / : Jenkins J

EMDB-50157:
Tau PHF subtomogram average relating to CS6 extended data Figure 9e
Method: subtomogram averaging / : Jenkins J

EMDB-50159:
Tau PHF subtomogram average relating to CS7 extended data Figure 9f
Method: subtomogram averaging / : Jenkins J

EMDB-50160:
Tau PHF subtomogram average relating to LOL1_PHF Figure 4g-h
Method: subtomogram averaging / : Jenkins J

EMDB-50161:
Tau SF subtomogram average relating to LOL1_SF Figure 4g-h
Method: subtomogram averaging / : Jenkins J

EMDB-50162:
Tau SF subtomogram average relating to LOL2_SF Figure 4i-j
Method: subtomogram averaging / : Jenkins J

EMDB-42527:
Pre-fusion Measles virus fusion protein complexed with Fab 77
Method: single particle / : Zyla D, Saphire EO

EMDB-42539:
Structure of the Measles virus Fusion protein in the post-fusion conformation
Method: single particle / : Zyla D, Saphire EO

EMDB-42593:
Structure of the Measles virus Fusion protein in the pre-fusion conformation
Method: single particle / : Zyla D, Saphire EO

EMDB-42595:
Structure of the Measles virus Fusion protein in the pre-fusion conformation with bound [FIP-HRC]2-PEG11
Method: single particle / : Zyla D, Saphire EO

EMDB-43827:
Fab 77-stabilized MeV F ectodomain fragment
Method: single particle / : Zyla D, Saphire EO

PDB-8ut2:
Pre-fusion Measles virus fusion protein complexed with Fab 77
Method: single particle / : Zyla D, Saphire EO

PDB-8utf:
Structure of the Measles virus Fusion protein in the post-fusion conformation
Method: single particle / : Zyla D, Saphire EO

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more