[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 356 items for (author: engel & c)

EMDB-16218:
Triple-stranded DNA as a structural element in DNA origami large cuboid with duplex-triplex crossover object
Method: single particle / : Sachenbacher K, Khoshouei A, Honemann MN, Engelen W, Feigl E, Dietz H

EMDB-16219:
Triple-stranded DNA as a structural element in DNA origami large cuboid with TFO object
Method: single particle / : Sachenbacher K, Khoshouei A, Honemann MN, Engelen W, Feigl E, Dietz H

EMDB-13477:
Small subunit of the Chlamydomonas reinhardtii mitoribosome
Method: single particle / : Waltz F, Soufari H, Hashem Y

EMDB-16213:
Triple-stranded DNA as a structural element in DNA origami large cuboid object
Method: single particle / : Sachenbacher K, Khoshouei A, Honemann MN, Engelen W, Feigl E, Dietz H

EMDB-16220:
Triple-stranded DNA as a structural element in DNA origami reinforced rod object
Method: single particle / : Sachenbacher K, Khoshouei A, Honemann MN, Engelen W, Feigl E, Dietz H

EMDB-16221:
Triple-stranded DNA as a structural element in DNA origami rod object
Method: single particle / : Sachenbacher K, Khoshouei A, Honemann MN, Engelen W, Feigl E, Dietz H

EMDB-16451:
Subtomogram average of the T. kivui 70S ribosome in situ
Method: subtomogram averaging / : Righetto RD, Dietrich HM, Kumar A, Wietrzynski W, Schuller SK, Trischler R, Wagner J, Schwarz FM, Mueller V, Schuller JM, Engel BD

EMDB-26259:
State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall map
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

PDB-7u0h:
State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

EMDB-24269:
State E2 nucleolar 60S ribosomal biogenesis intermediate - Overall map
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

EMDB-24270:
State E2 nucleolar 60S ribosomal biogenesis intermediate - Spb4 local refinement model
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

EMDB-24271:
State E2 nucleolar 60S ribosomal biogenesis intermediate - Spb1-MTD locally refined map
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

EMDB-24280:
State E2 nucleolar 60S ribosomal intermediate - Local Map for Noc2/Noc3 region
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

EMDB-24286:
State E2 nucleolar 60S ribosome biogenesis intermediate - Foot region map
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

EMDB-24290:
State E1 nucleolar 60S ribosome biogenesis intermediate - Spb4 locally refined map
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

EMDB-24296:
State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

EMDB-24297:
State E2 nucleolar 60S ribosomal biogenesis intermediate - L1 stalk local map
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

PDB-7nac:
State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

PDB-7nad:
State E2 nucleolar 60S ribosomal biogenesis intermediate - Spb4 local refinement model
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

PDB-7naf:
State E2 nucleolar 60S ribosomal biogenesis intermediate - Spb1-MTD local model
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

PDB-7r6k:
State E2 nucleolar 60S ribosomal intermediate - Model for Noc2/Noc3 region
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

PDB-7r6q:
State E2 nucleolar 60S ribosome biogenesis intermediate - Foot region model
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

PDB-7r72:
State E1 nucleolar 60S ribosome biogenesis intermediate - Spb4 local model
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

PDB-7r7a:
State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

PDB-7r7c:
State E2 nucleolar 60S ribosomal biogenesis intermediate - L1 stalk local model
Method: single particle / : Cruz VE, Sekulski K, Peddada N, Erzberger JP

EMDB-13888:
Antigen-Triggered Logic-Gating of DNA Nanodevices: T=1 DNA origami shell with two antidigoxigenin antibodies
Method: single particle / : Engelen W, Sigl C, Kadletz K, Willner EM, Dietz H

EMDB-14437:
Structure of substrate bound DRG1 (AFG2)
Method: single particle / : Prattes M, Grishkovskaya I, Bergler H, Haselbach D

EMDB-14471:
Structure of pre-60S particle bound to DRG1(AFG2)
Method: single particle / : Prattes M, Grishkovskaya I, Bergler H, Haselbach D

PDB-7z11:
Structure of substrate bound DRG1 (AFG2)
Method: single particle / : Prattes M, Grishkovskaya I, Bergler H, Haselbach D

PDB-7z34:
Structure of pre-60S particle bound to DRG1(AFG2).
Method: single particle / : Prattes M, Grishkovskaya I, Bergler H, Haselbach D

EMDB-27617:
Helical reconstruction of A92E HIV capsid in complex with CPSF6 construct (filtered by local resolution)
Method: helical / : Iqbal N, Asturias F, Kvaratskhelia M

EMDB-27619:
Helical reconstruction of A92E HIV capsid in complex with CPSF6 construct (filtered by local resolution)
Method: helical / : Iqbal N, Asturias F, Kvaratskhelia M

EMDB-27625:
Helical reconstruction of A92E HIV capsid in presence of FG mutant CPSF6 construct (filtered by local resolution)
Method: helical / : Iqbal N, Asturias F, Kvaratskhelia M

EMDB-26737:
Mouse mammary tumor virus strand transfer complex intasome
Method: single particle / : Jozwik I, Lyumkis D

EMDB-26744:
Higher-order assembly of multiple MMTV strand transfer complex intasomes
Method: single particle / : Jozwik I, Lyumkis D

PDB-7usf:
Mouse mammary tumor virus strand transfer complex intasome
Method: single particle / : Jozwik I, Lyumkis D

PDB-7ut1:
Higher-order assembly of multiple MMTV strand transfer complex intasomes
Method: single particle / : Jozwik I, Lyumkis D

EMDB-14358:
DNA origami rotary ratchet motor
Method: single particle / : Kube M, Pumm A

EMDB-15252:
In situ subtomogram average of the C. reinhardtii stellate at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15253:
In situ subtomogram average of the C. reinhardtii Y-link at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15254:
In situ subtomogram average of the C. reinhardtii MTD sleeve at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15255:
In situ subtomogram average of the C. reinhardtii MTD at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15256:
Composite map of the C. reinhardtii ciliary transition zone (structures attached to a single MTD) from in situ subtomogram averaging
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15257:
Composite map of the C. reinhardtii ciliary transition zone (full 9-fold assembly) from in situ subtomogram averaging
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15258:
In situ subtomogram average of C. reinhardtii IFT-B at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Jordan MA, Alvarez Viar G, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Pigino G, Engel BD

EMDB-15259:
In situ subtomogram average of C. reinhardtii IFT-A at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Jordan MA, Alvarez Viar G, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Pigino G, Engel BD

EMDB-15260:
In situ subtomogram average of C. reinhardtii dynein-1b at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Jordan MA, Alvarez Viar G, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Pigino G, Engel BD

EMDB-15261:
Composite map of the C. reinhardtii IFT (segment of a fully assembled train) at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Jordan MA, Alvarez Viar G, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Pigino G, Engel BD

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more