[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 24 items for (author: doskar & j)

EMDB-4054:
bacteriophage phi812K1-420 major capsid protein
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

PDB-5lij:
polyalanine chain built in bacteriophage phi812K1-420 cement protein density map
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-4051:
bacteriophage phi812K1-420 tail sheath and tail tube protein in native tail
Method: helical / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-4052:
bacteriophage phi812K1-420 tail sheath protein after contraction
Method: helical / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-4053:
bacteriophage phi812K1-420 major capsid protein
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

PDB-5li2:
bacteriophage phi812K1-420 tail sheath and tail tube protein in native tail
Method: helical / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

PDB-5li4:
bacteriophage phi812K1-420 tail sheath protein after contraction
Method: helical / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

PDB-5lii:
bacteriophage phi812K1-420 major capsid protein
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8304:
phi812K1-420 capsid
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-4003:
tail tube of phi812-K420 bacteriophage with cotracted tail before genome release
Method: helical / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8201:
Neck and connector complexes of native phi812-K420 bacteriophage, C1 symmetry reconstruction
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8202:
Neck and connector complexes of native phi812-K420 bacteriophage, C5 symmetry reconstruction
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8203:
Neck and connector complexes of native phi812-K420 bacteriophage, C6 symmetry reconstruction
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8204:
Neck and connector complexes of bacteriophage phi812-K420 with contracted tail and full heads, C1 symmetry reconstruction
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8205:
Neck and connector complexes of bacteriophage phi812-K420 with contracted tail and full heads, C5 symmetry reconstruction
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8206:
Neck and connector complexes of bacteriophage phi812-K420 with contracted tail and full heads, C6 symmetry reconstruction
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8207:
Neck and connector complexes of bacteriophage phi812-K420 with contracted tail and empty heads, C1 symmetry reconstruction
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8208:
Neck and connector complexes of bacteriophage phi812-K420 with contracted tail and empty heads, C5 symmetry reconstruction
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8209:
Neck and connector complexes of bacteriophage phi812-K420 with contracted tail and empty heads, C6 symmetry reconstruction
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8210:
Native baseplate of bacteriophage phi812-K420
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8211:
Native baseplate of bacteriophage phi812-K420 with tail fibre in alternative conformation
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8212:
baseplate of bacteriophage phi812-K420 in contracted state
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8213:
receptor-tripod complex of bacteriophage phi812-K420
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

EMDB-8214:
receptor-tripod complex of bacteriophage phi812-K420
Method: single particle / : Novacek J, Siborova M, Benesik M, Pantucek R, Doskar J, Plevka P

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more