[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 30 items for (author: dijun & d)

EMDB-13142:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation without nucleotides
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

EMDB-13143:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

EMDB-13144:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP and rhodamine 6G
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

EMDB-13145:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in outward-facing conformation with ADP-orthovanadate/ATP
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

PDB-7p03:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation without nucleotides
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

PDB-7p04:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

PDB-7p05:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP and rhodamine 6G
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

PDB-7p06:
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in outward-facing conformation with ADP-orthovanadate/ATP
Method: single particle / : Szewczak-Harris A, Wagner M, Du D, Schmitt L, Luisi BF

EMDB-10182:
Cryo-EM structure of Escherichia coli AcrBZ and DARPin in Saposin A-nanodisc with cardiolipin
Method: single particle / : Szewczak-Harris A, Du D, Newman C, Neuberger A, Luisi BF

EMDB-10183:
Cryo-EM structure of Escherichia coli AcrBZ and DARPin in Saposin A-nanodisc
Method: single particle / : Szewczak-Harris A, Du D, Newman C, Neuberger A, Luisi BF

EMDB-10184:
Cryo-EM structure of Escherichia coli AcrB and DARPin in Saposin A-nanodisc with cardiolipin
Method: single particle / : Szewczak-Harris A, Du D, Newman C, Neuberger A, Luisi BF

EMDB-10185:
Cryo-EM structure of Escherichia coli AcrB and DARPin in Saposin A-nanodisc
Method: single particle / : Szewczak-Harris A, Du D, Newman C, Neuberger A, Luisi BF

PDB-6sgr:
Cryo-EM structure of Escherichia coli AcrBZ and DARPin in Saposin A-nanodisc with cardiolipin
Method: single particle / : Szewczak-Harris A, Du D, Newman C, Neuberger A, Luisi BF

PDB-6sgs:
Cryo-EM structure of Escherichia coli AcrBZ and DARPin in Saposin A-nanodisc
Method: single particle / : Szewczak-Harris A, Du D, Newman C, Neuberger A, Luisi BF

PDB-6sgt:
Cryo-EM structure of Escherichia coli AcrB and DARPin in Saposin A-nanodisc with cardiolipin
Method: single particle / : Szewczak-Harris A, Du D, Newman C, Neuberger A, Luisi BF

PDB-6sgu:
Cryo-EM structure of Escherichia coli AcrB and DARPin in Saposin A-nanodisc
Method: single particle / : Szewczak-Harris A, Du D, Newman C, Neuberger A, Luisi BF

EMDB-0531:
AcrAB subcomplex - In situ structure and assembly of multidrug efflux pump AcrAB-TolC
Method: subtomogram averaging / : Chen M, Shi X, Ludtke SJ, Wang Z

EMDB-0532:
AcrAB-TolC close state - In situ structure and assembly of multidrug efflux pump AcrAB-TolC
Method: subtomogram averaging / : Chen M, Shi X, Ludtke SJ, Wang Z

EMDB-0533:
AcrAB-TolC open state - In situ structure and assembly of multidrug efflux pump AcrAB-TolC
Method: subtomogram averaging / : Chen M, Shi X, Ludtke SJ, Wang Z

PDB-5o66:
Asymmetric AcrABZ-TolC
Method: single particle / : Du D, Luisi BF

EMDB-3652:
Structure of the MacAB-TolC ABC-type tripartite multidrug efflux pump
Method: single particle / : Fitzpatrick AWP, Llabres S, Neuberger A, Blaza JN, Bai XC, Okada U, Murakami S, van Veen HW, Zachariae U, Scheres SHW, Luisi BF, Du D

EMDB-3653:
Structure of the MacAB-TolC ABC-type tripartite multidrug efflux pump-MacB section
Method: single particle / : Fitzpatrick AWP, Llabres S, Neuberger A, Blaza JN, Bai XC, Okada U, Murakami S, van Veen HW, Zachariae U, Scheres SHW, Luisi BF, Du D

PDB-5nik:
Structure of the MacAB-TolC ABC-type tripartite multidrug efflux pump
Method: single particle / : Fitzpatrick AWP, Llabres S, Neuberger A, Blaza JN, Bai XC, Okada U, Murakami S, van Veen HW, Zachariae U, Scheres SHW, Luisi BF, Du D

PDB-5nil:
Structure of the MacAB-TolC ABC-type tripartite multidrug efflux pump-MacB section
Method: single particle / : Fitzpatrick AWP, Llabres S, Neuberger A, Blaza JN, Bai XC, Okada U, Murakami S, van Veen HW, Zachariae U, Scheres SHW, Luisi BF, Du D

EMDB-8640:
Asymmetric structure of AcrAB-TolC tripartite multi drug efflux pump
Method: single particle / : Wang Z, Fan G, Hryc CF, Blaza JN, Serysheva II, Schmid MF, Chiu W, Luisi BF, Du D

EMDB-3636:
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Method: single particle / : Wang Z, Fan G, Hryc CF, Blaza JN, Serysheva II, Schmid MF, Chiu W, Luisi BF, Du D

EMDB-8636:
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Method: single particle / : wang Z, fan G, Hryc CF, Blaza JN, Serysheva II, Schmid MF, Chiu W, Luisi BF, Du D

PDB-5ng5:
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Method: single particle / : Wang Z, Fan G, Hryc CF, Blaza JN, Serysheva II, Schmid MF, Chiu W, Luisi BF, Du D

PDB-5v5s:
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Method: single particle / : wang Z, fan G, Hryc CF, Blaza JN, Serysheva II, Schmid MF, Chiu W, Luisi BF, Du D

EMDB-5915:
The structure of a complete multidrug efflux pump
Method: single particle / : Du D, Wang Z, James NR, Voss JE, Klimont E, Ohene-Agyei T, Venter H, Chiu W, Luisi BF

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more