[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 42 items for (author: conner & e)

PDB-8qox:
Two-component assembly of SlaA and SlaB S-layer proteins of Sulfolobus acidocaldarius
Method: subtomogram averaging / : Gambelli L, McLaren M, Isupov M, Conners R, Daum B

PDB-8qp0:
A hexamer pore in the S-layer of Sulfolobus acidocaldarius formed by SlaA protein
Method: subtomogram averaging / : Gambelli L, McLaren M, Isupov M, Conners R, Daum B

EMDB-18127:
S-layer of archaeon Sulfolobus acidocaldarius by subtomogram averaging
Method: subtomogram averaging / : Gambelli L, McLaren MJ, Daum B

EMDB-41308:
Tetrahymena Ribozyme scaffolded Zika Virus xrRNA
Method: single particle / : Langeberg CJ, Kieft JS

EMDB-41311:
Tetrahymena Ribozyme scaffolded TABV xrRNA
Method: single particle / : Langeberg CJ, Kieft JS

EMDB-41312:
Tetrahymena Ribozyme scaffolded Fluoride riboswitch
Method: single particle / : Langeberg CJ, Kieft JS

EMDB-41313:
Tetrahymena Ribozyme cryo-EM scaffold
Method: single particle / : Langeberg CJ, Kieft JS

PDB-8tjq:
Tetrahymena Ribozyme scaffolded Zika Virus xrRNA
Method: single particle / : Langeberg CJ, Kieft JS

PDB-8tju:
Tetrahymena Ribozyme scaffolded TABV xrRNA
Method: single particle / : Langeberg CJ, Kieft JS

PDB-8tjv:
Tetrahymena Ribozyme scaffolded Fluoride riboswitch
Method: single particle / : Langeberg CJ, Kieft JS

PDB-8tjx:
Tetrahymena Ribozyme cryo-EM scaffold
Method: single particle / : Langeberg CJ, Kieft JS

EMDB-15530:
S-layer protein SlaA from Sulfolobus acidocaldarius at pH 10.0
Method: single particle / : Gambelli L, Isupov MN, Daum B

EMDB-15531:
S-layer protein SlaA from Sulfolobus acidocaldarius at pH 7.0
Method: single particle / : Gambelli L, Isupov MN, Daum B

PDB-8an2:
S-layer protein SlaA from Sulfolobus acidocaldarius at pH 10.0
Method: single particle / : Gambelli L, Isupov MN, Daum B

PDB-8an3:
S-layer protein SlaA from Sulfolobus acidocaldarius at pH 7.0
Method: single particle / : Gambelli L, Isupov MN, Daum B

EMDB-17448:
Spraguea lophii ribosome in the closed conformation by cryo sub tomogram averaging
Method: subtomogram averaging / : Gil Diez P, McLaren M, Isupov MN, Daum B, Conners R, Williams B

EMDB-17457:
Spraguea lophii ribosome dimer
Method: subtomogram averaging / : Gil Diez P, McLaren M, Isupov MN, Daum B, Conners R, Williams B

PDB-8p5d:
Spraguea lophii ribosome in the closed conformation by cryo sub tomogram averaging
Method: subtomogram averaging / : Gil Diez P, McLaren M, Isupov MN, Daum B, Conners R, Williams B

PDB-8p60:
Spraguea lophii ribosome dimer
Method: subtomogram averaging / : Gil Diez P, McLaren M, Isupov MN, Daum B, Conners R, Williams B

EMDB-14635:
S-layer protein SlaA from Sulfolobus acidocaldarius at pH 4.0
Method: single particle / : Gambelli L, Isupov MN, Daum B

PDB-7zcx:
S-layer protein SlaA from Sulfolobus acidocaldarius at pH 4.0
Method: single particle / : Gambelli L, Isupov MN, Daum B

EMDB-15831:
CryoEM structure of the pointy tip (proteins pIII/pVI/pVIII) from the f1 filamentous bacteriophage
Method: single particle / : Conners R, McLaren M, Gold VAM

EMDB-15832:
CryoEM structure of the round tip (proteins pVII/pVIII/pIX) from the f1 filamentous bacteriophage
Method: single particle / : Conners R, McLaren M, Gold VAM

EMDB-15833:
CryoEM structure of the central filamentous region of the f1 filamentous bacteriophage, consisting of the major capsid protein pVIII
Method: helical / : Conners R, McLaren M, Gold VAM

PDB-8b3o:
CryoEM structure of the pointy tip (proteins pIII/pVI/pVIII) from the f1 filamentous bacteriophage
Method: single particle / : Conners R, McLaren M, Gold VAM

PDB-8b3p:
CryoEM structure of the round tip (proteins pVII/pVIII/pIX) from the f1 filamentous bacteriophage
Method: single particle / : Conners R, McLaren M, Gold VAM

PDB-8b3q:
CryoEM structure of the central filamentous region of the f1 filamentous bacteriophage, consisting of the major capsid protein pVIII
Method: helical / : Conners R, McLaren M, Gold VAM

EMDB-17172:
Ternary structure of intramolecular bivalent glue degrader IBG1 bound to BRD4 and DCAF16:DDB1deltaBPB
Method: single particle / : Cowan AD, Sundaramoorthy R, Nakasone MA, Ciulli A

PDB-8ov6:
Ternary structure of intramolecular bivalent glue degrader IBG1 bound to BRD4 and DCAF16:DDB1deltaBPB
Method: single particle / : Cowan AD, Sundaramoorthy R, Nakasone MA, Ciulli A

EMDB-13892:
Spraguea lophii ribosome
Method: single particle / : Gil Diez P, McLaren M

PDB-7qca:
Spraguea lophii ribosome
Method: single particle / : Gil Diez P, McLaren M, Isupov MN, Daum B, Conners R, Williams B

EMDB-23441:
Structure of human SetD3 methyl-transferase in complex with 2A protease from Coxsackievirus B3
Method: single particle / : Verba KA, Schulze-Gahmen U

PDB-7lms:
Structure of human SetD3 methyl-transferase in complex with 2A protease from Coxsackievirus B3
Method: single particle / : Verba KA, Schulze-Gahmen U

EMDB-12875:
The archaellum of Methanocaldococcus villosus
Method: helical / : Isupov M, Gambelli L

PDB-7ofq:
The archaellum of Methanocaldococcus villosus
Method: helical / : Isupov M, Gambelli L, Daum B

EMDB-12874:
CryoEM structure of the outer membrane secretin pore pIV from the f1 filamentous bacteriophage.
Method: single particle / : Conners R, Gold VAM

PDB-7ofh:
CryoEM structure of the outer membrane secretin pore pIV from the f1 filamentous bacteriophage.
Method: single particle / : Conners R, Gold VAM

EMDB-3585:
Structure of the VirD4 bound to a Type IV secretion system
Method: single particle / : Redzej A, Ukleja M

EMDB-2567:
Structure of a bacterial Type IV secretion system
Method: single particle / : Low HH, Gubellini F, Rivera-Calzada A, Braun N, Connery S, Dujeancourt A, Lu F, Redzej A, Fronzes R, Orlova EV, Waksman G

PDB-4bkk:
The Respiratory Syncytial Virus nucleoprotein-RNA complex forms a left-handed helical nucleocapsid.
Method: electron tomography / : Bakker SE, Duquerroy S, Galloux M, Loney C, Conner E, Eleouet JF, Rey FA, Bhella D

EMDB-2369:
The Respiratory Syncytial Virus nucleoprotein-RNA complex forms a left-handed helical nucleocapsid.
Method: subtomogram averaging / : Bakker SE, Duquerroy S, Galloux M, Loney C, Conner E, Eleouet JF, Rey FA, Bhella D

EMDB-2370:
The Respiratory Syncytial Virus nucleoprotein-RNA complex forms a left-handed helical nucleocapsid.
Method: subtomogram averaging / : Bakker SE, Duquerroy S, Galloux M, Loney C, Conner E, Eleouet JF, Rey FA, Bhella D

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more