[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 98 items for (author: chu & yk)

EMDB-19250:
Pseudoatomic model of a second-order Sierpinski triangle formed by the citrate synthase from Synechococcus elongatus
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

EMDB-19251:
Structure of a first order Sierpinski triangle formed by the H369R mutant of the citrate synthase from Synechococcus elongatus
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

EMDB-16004:
Structure of hexameric subcomplexes (Truncation Delta2-6) of the fractal citrate synthase from Synechococcus elongatus PCC7942
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

EMDB-15529:
Structure of a first level Sierpinski triangle formed by a citrate synthase
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

EMDB-42371:
Mouse apoferritin imaged with a square aperture
Method: single particle / : Chua EYD, Alink LM, Kopylov M, Johnston J, Einsenstein F, de Marco A

EMDB-42372:
Mouse apoferritin imaged with a round aperture
Method: single particle / : Chua EYD, Alink LM, Kopylov M, Johnston J, Einsenstein F, de Marco A

EMDB-42373:
Mouse apoferritin imaged with a square aperture with P2 projection lens rotation, reconstructed from 25,000 particles
Method: single particle / : Chua EYD, Alink LM, Kopylov M, Johnston J, Einsenstein F, de Marco A

EMDB-42374:
Mouse apoferritin imaged with a round aperture without P2 projection lens rotation, reconstructed from 25,000 particles
Method: single particle / : Chua EYD, Alink LM, Kopylov M, Johnston J, Einsenstein F, de Marco A

EMDB-36062:
Asfv topoisomerase 2 - apo conformer Ia
Method: single particle / : Chang CW, Tsai MD

EMDB-36063:
Asfv topoisomerase 2 - apo conformer Ib
Method: single particle / : Chang CW, Tsai MD

EMDB-36064:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIa
Method: single particle / : Chang CW, Tsai MD

EMDB-36065:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIb
Method: single particle / : Chang CW, Tsai MD

EMDB-36066:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIa
Method: single particle / : Chang CW, Tsai MD

EMDB-36067:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIb
Method: single particle / : Chang CW, Tsai MD

EMDB-36116:
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and etoposide (EDI-1)
Method: single particle / : Chang CW, Tsai MD

EMDB-36117:
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02bDNA and etoposide (EDI-2)
Method: single particle / : Chang CW, Tsai MD

EMDB-36118:
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and m-AMSA (EDI-3)
Method: single particle / : Chang CW, Tsai MD

EMDB-36473:
Cryo-EM structure of the full-length African swine fever virus topoisomerase 2 complexed with Cut02aDNA and etoposide
Method: single particle / : Chang CW, Tsai MD

EMDB-42851:
5x5 tiled montage tomogram of a holey carbon grid with apoferritin imaged with a square electron beam
Method: electron tomography / : Chua EYD, Alink LM, Kopylov M, Johnston J, Einsenstein F, de Marco A

EMDB-42879:
3x3 tiled montage tomogram of a yeast lamella imaged with a square electron beam
Method: electron tomography / : Chua EYD, Alink LM, Kopylov M, Johnston J, Einsenstein F, de Marco A

EMDB-16024:
SARS-CoV-2 S protein in complex with pT1644 Fab
Method: single particle / : Stroeh L, Hansen G, Vollmer B, Krey T, Benecke T, Gruenewald K

EMDB-16026:
SARS-CoV-2 S protein in complex with pT1696 Fab
Method: single particle / : Hansen G, Benecke T, Vollmer B, Gruenewald K, Krey T

EMDB-41158:
CS2it1p2_F7K local refinement for HCMV Trimer in complex with CS2it1p2_F7K Fab and CS4tt1p1_E3K Fab
Method: single particle / : Goldsmith JA, McLellan JS

EMDB-41180:
Global reconstruction for HCMV Pentamer in complex with CS2pt1p2_A10L Fab and CS3pt1p4_C1L Fab
Method: single particle / : Goldsmith JG, McLellan JS

EMDB-33984:
Complex structure of Neuropeptide Y Y2 receptor in complex with PYY(3-36) and Gi
Method: single particle / : Kang H, Park C, Kim J, Choi HJ

EMDB-33985:
Complex structure of Neuropeptide Y Y2 receptor in complex with NPY and Gi
Method: single particle / : Kang H, Park C, Kim J, Choi HJ

EMDB-35494:
Complex structure of Neuropeptide Y Y2 receptor in complex with NPY and Gi (Consensus map)
Method: single particle / : Kang H, Park C, Kim J, Choi HJ

EMDB-35495:
Complex structure of Neuropeptide Y Y2 receptor in complex with NPY and Gi (Focused map on NPY-Y2R)
Method: single particle / : Kang H, Park C, Kim J, Choi HJ

EMDB-35496:
Complex structure of Neuropeptide Y Y2 receptor in complex with NPY and Gi (Focused map on Gi-scFv16)
Method: single particle / : Kang H, Park C, Kim J, Choi HJ

EMDB-35497:
Complex structure of Neuropeptide Y Y2 receptor in complex with PYY(3-36) and Gi (Consensus map)
Method: single particle / : Kang H, Park C, Kim J, Choi HJ

EMDB-35498:
Complex structure of Neuropeptide Y Y2 receptor in complex with PYY(3-36) and Gi (Focused map on PYY(3-36)-Y2R)
Method: single particle / : Kang H, Park C, Kim J, Choi HJ

EMDB-35499:
Complex structure of Neuropeptide Y Y2 receptor in complex with PYY(3-36) and Gi (Focused map on Gi-scFv16)
Method: single particle / : Kang H, Park C, Kim J, Choi HJ

EMDB-13485:
Cryo-EM structure of Bestrhodopsin (rhodopsin-rhodopsin-bestrophin) complex
Method: single particle / : Matzov D, Kaczmarczyk I, Shalev-Benami M

PDB-7pl9:
Cryo-EM structure of Bestrhodopsin (rhodopsin-rhodopsin-bestrophin) complex
Method: single particle / : Matzov D, Kaczmarczyk I, Shalev-Benami M

EMDB-14250:
Structure of the SARS-CoV-2 spike glycoprotein in complex with the 87G7 antibody Fab fragment
Method: single particle / : Hurdiss DL, Drulyte I

EMDB-14271:
Structure of the SARS-CoV-2 spike glycoprotein in complex with the 87G7 antibody Fab fragment (local refinement)
Method: single particle / : Hurdiss DL, Drulyte I

PDB-7r40:
Structure of the SARS-CoV-2 spike glycoprotein in complex with the 87G7 antibody Fab fragment
Method: single particle / : Hurdiss DL

EMDB-30262:
DXPS
Method: single particle / : Lau WCY

EMDB-23719:
EBOV GP bound to rEBOV-442 and rEBOV-515 Fabs
Method: single particle / : Murin CD, Ward AB

PDB-7m8l:
EBOV GP bound to rEBOV-442 and rEBOV-515 Fabs
Method: single particle / : Murin CD, Ward AB

EMDB-11588:
Structure of low-light grown Chlorella ohadii Photosystem I
Method: single particle / : Caspy I, Nelson N, Nechushtai R, Neumann E, Shkolnisky Y

EMDB-11589:
Structure of high-light grown Chlorella ohadii photosystem I
Method: single particle / : Caspy I, Nelson N, Nechushtai R, Shkolnisky Y, Neumann E

EMDB-11640:
Structure of small high-light grown Chlorella ohadii photosystem I
Method: single particle / : Caspy I, Nelson N

PDB-6zzx:
Structure of low-light grown Chlorella ohadii Photosystem I
Method: single particle / : Caspy I, Nelson N, Nechushtai R, Neumann E, Shkolnisky Y

PDB-6zzy:
Structure of high-light grown Chlorella ohadii photosystem I
Method: single particle / : Caspy I, Nelson N, Nechushtai R, Shkolnisky Y, Neumann E

PDB-7a4p:
Structure of small high-light grown Chlorella ohadii photosystem I
Method: single particle / : Caspy I, Nelson N, Nechushtai R, Shkolnisky Y, Neumann E

EMDB-30263:
Hsp21-DXPS
Method: single particle / : Lau WCY

EMDB-22839:
BDBV-289 bound to EBOV GPdMuc Makona
Method: single particle / : Murin CD, Ward AB

PDB-7kej:
BDBV-289 bound to EBOV GPdMuc Makona
Method: single particle / : Murin CD, Ward AB

EMDB-12335:
Structure of PSII-M
Method: single particle / : Zabret J, Bohn S, Schuller SK, Arnolds O, Chan A, Tajkhorshid E, Stoll R, Engel BD, Rudack T, Schuller JM, Nowaczyk MM

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more