[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 82 items for (author: chowdhury & s)

EMDB-41788:
S. cerevisiae Pex1/Pex6 with 1 mM ATP
Method: single particle / : Gardner BM, Richardson CD, Martin A, Lander GC, Chowdhury S

PDB-8u0v:
S. cerevisiae Pex1/Pex6 with 1 mM ATP
Method: single particle / : Gardner BM

EMDB-29036:
Amyloid-beta (1-40) fibrils derived from a CAA patient
Method: helical / : Crooks EJ, Fu Z, Chowdhury S, Smith SO

EMDB-29037:
Amyloid-beta (1-40) fibrils derived from familial Dutch-type CAA patient (population B)
Method: helical / : Crooks EJ, Fu Z, Chowdury S, Smith SO

PDB-8ff2:
Amyloid-beta (1-40) fibrils derived from a CAA patient
Method: helical / : Crooks EJ, Fu Z, Chowdhury S, Smith SO

PDB-8ff3:
Amyloid-beta (1-40) fibrils derived from familial Dutch-type CAA patient (population B)
Method: helical / : Crooks EJ, Fu Z, Chowdury S, Smith SO

EMDB-26469:
Photosynthetic assembly of Chlorobaculum tepidum (RC-FMO1)
Method: single particle / : Puskar R, Truong CD, Swain K, Li S, Cheng KW, Wang TY, Poh YP, Liu H, Chou TF, Nannenga B, Chiu PL

EMDB-26471:
Photosynthetic assembly of Chlorobaculum tepidum (RC-FMO2)
Method: single particle / : Puskar R, Truong CD, Swain K, Li S, Cheng KW, Wang TY, Poh YP, Liu H, Chou TF, Nannenga B, Chiu PL

PDB-7uea:
Photosynthetic assembly of Chlorobaculum tepidum (RC-FMO1)
Method: single particle / : Puskar R, Truong CD, Swain K, Li S, Cheng KW, Wang TY, Poh YP, Liu H, Chou TF, Nannenga B, Chiu PL

PDB-7ueb:
Photosynthetic assembly of Chlorobaculum tepidum (RC-FMO2)
Method: single particle / : Puskar R, Truong CD, Swain K, Li S, Cheng KW, Wang TY, Poh YP, Liu H, Chou TF, Nannenga B, Chiu PL

EMDB-26732:
Cryo-EM structure of WAVE Regulatory Complex
Method: single particle / : Ding B, Yang S, Chen B, Chowdhury S

EMDB-26733:
Cryo-EM structure of D-site Rac1-bound WAVE Regulatory Complex
Method: single particle / : Ding B, Yang S, Chen B, Chowdhury S

EMDB-26734:
Cryo-EM structure of WAVE regulatory complex with Rac1 bound on both A and D site
Method: single particle / : Ding B, Yang S, Chen B, Chowdhury S

PDB-7usc:
Cryo-EM structure of WAVE Regulatory Complex
Method: single particle / : Ding B, Yang S, Chen B, Chowdhury S

PDB-7usd:
Cryo-EM structure of D-site Rac1-bound WAVE Regulatory Complex
Method: single particle / : Ding B, Yang S, Chen B, Chowdhury S

PDB-7use:
Cryo-EM structure of WAVE regulatory complex with Rac1 bound on both A and D site
Method: single particle / : Ding B, Yang S, Chen B, Chowdhury S

EMDB-26063:
Single-particle Cryo-EM structure of Arp2/3 complex at branched-actin junction.
Method: single particle / : Ding B, Narvaez-Ortiz HY, Nolen BJ, Chowdhury S

PDB-7tpt:
Single-particle Cryo-EM structure of Arp2/3 complex at branched-actin junction.
Method: single particle / : Ding B, Narvaez-Ortiz HY, Nolen BJ, Chowdhury S

EMDB-23061:
Cryo-EM structure of Ephydatia fluviatilis PiwiA-piRNA complex
Method: single particle / : Chowdhury S, Anzelon TA, MacRae IJ, Lander GC

EMDB-23062:
Cryo-EM structure of EfPiwiA(MID/PIWI domains)-piRNA-long-target complex
Method: single particle / : Chowdhury S, Anzelon TA, MacRae IJ, Lander GC

EMDB-23063:
Cryo-EM structure of Ephydatia fluviatilis PiwiA-piRNA-target complex
Method: single particle / : Chowdhury S, Anzelon TA, MacRae IJ, Lander GC

PDB-7kx7:
Cryo-EM structure of Ephydatia fluviatilis PiwiA-piRNA complex
Method: single particle / : Anzelon TA, Chowdhury S, Lander GC, MacRae IJ

PDB-7kx9:
Cryo-EM structure of Ephydatia fluviatilis PiwiA-piRNA-target complex
Method: single particle / : Anzelon TA, Chowdhury S, Lander GC, MacRae IJ

EMDB-21502:
Structure of Dip1-activated Arp2/3 complex with nucleated actin filament
Method: single particle / : Shaaban M, Nolen BJ, Chowdhury S

EMDB-21503:
Structure of S. pombe Arp2/3 complex in inactive state
Method: single particle / : Shaaban M, Nolen BJ, Chowdhury S

PDB-6w17:
Structure of Dip1-activated Arp2/3 complex with nucleated actin filament
Method: single particle / : Shaaban M, Nolen BJ, Chowdhury S

PDB-6w18:
Structure of S. pombe Arp2/3 complex in inactive state
Method: single particle / : Shaaban M, Nolen BJ, Chowdhury S

PDB-6ne0:
Structure of double-stranded target DNA engaged Csy complex from Pseudomonas aeruginosa (PA-14)
Method: single particle / : Chowdhury S, Rollins MF, Carter J, Golden SM, Miettinen HM, Santiago-Frangos A, Faith D, Lawrence MC, Wiedenheft B, Lander GC

EMDB-9147:
Diheteromeric NMDA receptor GluN1/GluN2A in the '1-Knuckle' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 6.1
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9148:
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Extended' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 6.1
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9149:
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Super-Splayed' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 6.1
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9150:
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Symmetric' conformation, in complex with glycine and glutamate, in the presence of 1 millimolar EDTA, and at pH 7.4
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9151:
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Extended-2' conformation, in complex with glycine and glutamate, in the presence of 1 millimolar zinc chloride, and at pH 7.4
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9152:
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Splayed-Open' conformation, in complex with glycine and glutamate, in the presence of 1 millimolar zinc chloride, and at pH 7.4
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9153:
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Super-Splayed' conformation, in complex with glycine and glutamate, in the presence of 1 millimolar zinc chloride, and at pH 7.4
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9154:
Diheteromeric NMDA receptor GluN1/GluN2A in the '1-Knuckle' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 7.4
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9155:
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Asymmetric' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 7.4
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9156:
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Extended-1' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 7.4
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9157:
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Symmetric' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 8.0
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9158:
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Symmetric' conformation, in complex with glycine and glutamate, in the presence of 0.1 millimolar EDTA, and at pH 8.0
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9159:
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Symmetric' conformation, in complex with glycine and glutamate, in the presence of 1 millimolar zinc chloride, 3 millimolar EDTA, and at pH 7.4
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9160:
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the '2-Knuckle-Symmetric' conformation, in complex with glycine and glutamate, in the presence of 1 millimolar EDTA, and at pH 7.4
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9161:
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the '1-Knuckle' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 7.4
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9162:
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the '2-Knuckle-Asymmetric' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 7.4
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9163:
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* Extracellular Domain in the '2-Knuckle-Asymmetric' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 7.4
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9164:
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the '2-Knuckle-Symmetric' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 7.4
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

EMDB-9165:
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the 'Extended' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 7.4
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

PDB-6mm9:
Diheteromeric NMDA receptor GluN1/GluN2A in the '1-Knuckle' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 6.1
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

PDB-6mma:
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Extended' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 6.1
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

PDB-6mmb:
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Super-Splayed' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 6.1
Method: single particle / : Jalali-Yazdi F, Chowdhury S, Yoshioka C, Gouaux E

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more