[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 122 items for (author: chen & yk)

EMDB-39126:
Structure of the FADD/Caspase-8/cFLIP death effector domain assembly
Method: single particle / : Lin SC, Yang CY

EMDB-39127:
Structure of the FADD/Caspase-8/cFLIP death effector domain assembly
Method: single particle / : Lin SC, Yang CY

PDB-8ybx:
Structure of the FADD/Caspase-8/cFLIP death effector domain assembly
Method: single particle / : Lin SC, Yang CY

EMDB-36800:
Potassium transporter KtrAB from Bacillus subtilis in ADP-bound state
Method: single particle / : Chang YK, Chiang WT, Hu NJ, Tsai MD

EMDB-36801:
Potassium transporter KtrAB from Bacillus subtilis in ADP-bound state, focused refined on KtrA octamer
Method: single particle / : Chang YK, Chiang WT, Hu NJ, Tsai MD

EMDB-36802:
Potassium transporter KtrAB from Bacillus subtilis in ADP-bound state, focused refined on KtrB dimer
Method: single particle / : Chang YK, Chiang WT, Hu NJ, Tsai MD

EMDB-36803:
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of MgCl2
Method: single particle / : Chang YK, Chiang WT, Hu NJ, Tsai MD

EMDB-36804:
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA
Method: single particle / : Chang YK, Chiang WT, Hu NJ, Tsai MD

EMDB-38477:
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA, vertical C2 symmetry axis
Method: single particle / : Chang YK, Chiang WT, Hu NJ, Tsai MD

EMDB-38478:
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA, C1 symmetry
Method: single particle / : Chang YK, Chiang WT, Hu NJ, Tsai MD

EMDB-36062:
Asfv topoisomerase 2 - apo conformer Ia
Method: single particle / : Chang CW, Tsai MD

EMDB-36063:
Asfv topoisomerase 2 - apo conformer Ib
Method: single particle / : Chang CW, Tsai MD

EMDB-36064:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIa
Method: single particle / : Chang CW, Tsai MD

EMDB-36065:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIb
Method: single particle / : Chang CW, Tsai MD

EMDB-36066:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIa
Method: single particle / : Chang CW, Tsai MD

EMDB-36067:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIb
Method: single particle / : Chang CW, Tsai MD

EMDB-36116:
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and etoposide (EDI-1)
Method: single particle / : Chang CW, Tsai MD

EMDB-36117:
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02bDNA and etoposide (EDI-2)
Method: single particle / : Chang CW, Tsai MD

EMDB-36118:
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and m-AMSA (EDI-3)
Method: single particle / : Chang CW, Tsai MD

EMDB-36473:
Cryo-EM structure of the full-length African swine fever virus topoisomerase 2 complexed with Cut02aDNA and etoposide
Method: single particle / : Chang CW, Tsai MD

EMDB-36137:
Cryo-EM structure of Holo form of ScBfr with O symmetry
Method: single particle / : Jobichen C, Sivaraman J

EMDB-36139:
Cryo-EM structure of Holo form of ScBfr in C1 symmetry
Method: single particle / : Jobichen C, Sivaraman J

EMDB-36140:
Cryo-EM structure of Fe-biomineral from bacterioferritin
Method: single particle / : Jobichen C, Sivaraman J

EMDB-14379:
Cryo-EM structure of an intact carboxysome - core layer
Method: single particle / : Mann D, Evans SL, Bergeron JRC

EMDB-33639:
Cryo-EM structure of Apo form of ScBfr
Method: single particle / : Jobichen C, Sivaraman J

EMDB-33640:
Cryo-EM structure of bacterioferritin holoform 1a
Method: single particle / : Jobichen C, Sivaraman J

EMDB-33645:
Cryo-EM structure if bacterioferritin holoform
Method: single particle / : Jobichen C, Sivaraman J

EMDB-34551:
Cryo-EM structure of HACE1 monomer
Method: single particle / : Singh S, Machida S, Tulsian NK, Choong YK, Ng J, Shanker S, Yaochen LD, Shi J, Sivaraman J

EMDB-34586:
Cryo-EM structure of HACE1 dimer
Method: single particle / : Singh S, Machida S, Tulsian NK, Choong YK, Ng J, Shanker S, Yaochen LD, Shi J, Sivaraman J

EMDB-14376:
Cryo-EM structure of the Cyanobium sp. PCC 7001 RuBisCO enzyme at 3.8 A resolution with C1 symmetry
Method: single particle / : Evans SL, Mann D, Bergeron JRC

EMDB-27706:
Vaccine elicited Antibody MU89 bound to CH848.D949.10.17_N133D_N138T.DS.SOSIP.664 HIV-1 Env trimer
Method: single particle / : Stalls V, Acharya P

EMDB-27776:
Vaccine elicited Antibody MU89+S27Y bound to CH848.D949.10.17_N133D_N138T.DS.SOSIP.664 HIV-1 Env trimer
Method: single particle / : Stalls V, Acharya P

PDB-8cmy:
Structure of the Cyanobium sp. PCC 7001 determined with C1 symmetry
Method: single particle / : Evans SL, Bergeron JRC

EMDB-34090:
Cryo-EM structure of VTC complex
Method: single particle / : Guan ZY, Chen J, Liu RW, Chen YK, Xing Q, Du ZM, Liu Z

EMDB-27243:
Cryo-EM map of MORF-WHs in complex with 197bp nucleosome aided by scFv
Method: single particle / : Zhou BR

EMDB-27542:
Cryo-EM reveals the molecular basis of laminin polymerization and LN-lamininopathies
Method: single particle / : Kulczyk AW

PDB-8dmk:
Cryo-EM reveals the molecular basis of laminin polymerization and LN-lamininopathies
Method: single particle / : Kulczyk AW

EMDB-14377:
Cryo-EM structure of Cyanobium sp. PCC 7001 carboxysome shell
Method: single particle / : Evans SL, Mann D, Bergeron JRC

EMDB-14380:
Cryo-EM structure of the Cyanobium sp. PCC 7001 Carboxysome internal density outer layer
Method: single particle / : Evans SL, Mann D, Bergeron JRC

EMDB-14381:
Cryo-EM structure of the Cyanobium sp. PCC 7001 Carboxysome internal density middle layer
Method: single particle / : Evans SL, Mann D, Bergeron JRC

EMDB-14385:
Cryo-EM structure of an a-carboxysome RuBisCO enzyme at 2.9 A resolution
Method: single particle / : Mann D, Evans SL, Bergeron JRC

PDB-7yyo:
Cryo-EM structure of an a-carboxysome RuBisCO enzyme at 2.9 A resolution
Method: single particle / : Mann D, Evans SL, Bergeron JRC

EMDB-15409:
C1 Cyanobacteria sp PCC 7001 RuBisCO
Method: single particle / : Evans SL, Mann D, Bergeron JRC

EMDB-26507:
SARS-CoV-2 spike in complex with Multivalent miniprotein inhibitor FUS231-P24 (2RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26508:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS231-P24 (3RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26509:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS31-G10 (2RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26510:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS31-G10 (3RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26511:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26512:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-7uhb:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more