[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 88 items for (author: chang & yw)

EMDB-43330:
Tomogram of human Alzheimer's disease brain tissue showing variety of membrane vesicles and axonal cross-sections
Method: electron tomography / : Creekmore BC, Lee EB, Chang YW

EMDB-43331:
Tomogram of human Alzheimer's disease brain tissue showing longitudinal axonal cross-section
Method: electron tomography / : Creekmore BC, Lee EB, Chang YW

EMDB-43334:
Tomogram of human Alzheimer's disease brain tissue showing variety of membrane vesicles
Method: electron tomography / : Creekmore BC, Lee EB, Chang YW

EMDB-29753:
Tomogram of an apical end of a Toxoplasma Gondii tachyzoite displaying an extruded conoid
Method: electron tomography / : Martinez M, Chang YW, Mageswaran SK

EMDB-29754:
Cryptosporidium parvum sporozoite apical end
Method: electron tomography / : Martinez M, Chang YW, Mageswaran SK

EMDB-29755:
Cryptosporidium parvum sporozoite basal end
Method: electron tomography / : Martinez M, Chang YW, Mageswaran SK

EMDB-29784:
Subtomogram average of the preconoidal rings from Cryptosporidium parvum sporozoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29791:
Refined subtomogram average of the top preconoidal ring from Cryptosporidium parvum sporozoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29801:
Refined subtomogram average of the bottom preconoidal ring from Cryptosporidium parvum sporozoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29808:
Subtomogram average of the IMC surface filaments, top view, from Cryptosporidium parvum sporozoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29809:
IMC surface filament, sawtooth conformation, from Cryptosporidium parvum sporozoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29810:
IMC surface filament, side view, from Cryptosporidium parvum sporozoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29826:
Upper preconoidal ring from Toxoplasma gondii tachyzoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29827:
Lower preconoidal ring of Toxoplasma gondii tachyzoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29832:
Preconoidal rings of Toxoplasma gondii tachyzoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29835:
Basal IMC pore of Cryptosporidium parvum sporozoites
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29838:
Preconoidal rings of Toxoplasma gondii tachyzoites with Formin1 conditionally depleted
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29839:
Upper preconoidal ring of Toxoplasma gondii tachyzoites with Formin1 conditionally depleted
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-29840:
Lower preconoidal ring from Toxoplasma gondii tachyzoites with Formin1 conditionally depleted
Method: subtomogram averaging / : Martinez M, Mageswaran SK, Chang YW

EMDB-35598:
cryo-EM structure of the middle part of the shrimp white spot syndrome virus nucleocapsid (wide type)
Method: single particle / : Huang HJ, Wang HC, Chen LL

EMDB-35600:
Cryo-Em structure of the middle part of the shrimp white spot syndrome virus nucleocapsid (narrow type)
Method: single particle / : Huang HJ, Wang HC

EMDB-40043:
Unsupervised detection of 70S ribosome from Mycoplasma pneumoniae
Method: subtomogram averaging / : Zeng X

EMDB-40087:
Unsupervised detection of TRiC in Rattus norvegicus neuron
Method: subtomogram averaging / : Zeng X

EMDB-40089:
Unsupervised detection of ribosome in Rattus neuron
Method: subtomogram averaging / : Zeng X

EMDB-40090:
Unsupervised detection of proteasome in Rattus neuron
Method: subtomogram averaging / : Zeng X

EMDB-26547:
Mediator-PIC Early (Tail A + Upstream DNA & Activator)
Method: single particle / : Gorbea Colon JJ, Chen SF, Tsai KL, Murakami K

EMDB-26551:
Mediator-PIC Early (Composite Model)
Method: single particle / : Gorbea Colon JJ, Chen SF, Tsai KL, Murakami K

EMDB-26542:
Core Mediator-PICearly (Copy A)
Method: single particle / : Gorbea Colon JJ, Chen SF, Tsai KL, Murakami K

EMDB-26543:
Mediator-PIC Early (Tail A)
Method: single particle / : Gorbea Colon JJ, Chen SF, Tsai KL, Murakami K

EMDB-26544:
Mediator-PIC Early (Core B)
Method: single particle / : Gorbea Colon JJ, Chen SF, Tsai KL, Murakami K

EMDB-26545:
Mediator-PIC Early (Mediator A)
Method: single particle / : Gorbea Colon JJ, Chen SF, Tsai KL, Murakami K

EMDB-26548:
Mediator-PIC Early (Tail A/B Dimer)
Method: single particle / : Gorbea Colon JJ, Chen SF, Tsai KL, Murakami K

EMDB-28023:
Dimerized Mediator-PIC with early GTFs and TFIIE on a divergent promoter
Method: subtomogram averaging / : Palao III L

EMDB-28024:
Dimerized Mediator PIC with early GTFs on a divergent promoter
Method: subtomogram averaging / : Palao III L

EMDB-14777:
Cryo-EM structure of archaic chaperone-usher Csu pilus of Acinetobacter baumannii
Method: helical / : Pakharukova N, Malmi H, Tuittila M, Paavilainen S, Ghosal D, Chang YW, Jensen GJ, Zavialov AV

EMDB-25702:
Flagellar motor of Hylemonella gracilis
Method: subtomogram averaging / : Kaplan M, Oikonomou CM, Wood CR, Chreifi G, Subramanian P, Ortega DR, Chang YW, Beeby M, Shaffer LS, Jensen GJ

EMDB-25703:
Flagellar MS-complex of Helicobacter pylori delta fliM fliP*
Method: subtomogram averaging / : Kaplan M, Oikonomou CM, Wood CR, Chreifi G, Subramanian P, Ortega DR, Chang YW, Beeby M, Shaffer LS, Jensen GJ

EMDB-25704:
Flagellar MS-complex of Helicobacter pylori fliP*
Method: subtomogram averaging / : Kaplan M, Oikonomou CM, Wood CR, Chreifi G, Subramanian P, Ortega DR, Chang YW, Beeby M, Shaffer LS, Jensen GJ

EMDB-25705:
Flagellar MS-complex of Helicobacter pylori delta fliQ fliP*
Method: subtomogram averaging / : Kaplan M, Oikonomou CM, Wood CR, Chreifi G, Subramanian P, Ortega DR, Chang YW, Beeby M, Shaffer LS, Jensen GJ

EMDB-26745:
Plasmodium falciparum merozoite with two rhoptries and an associated apical vesicle
Method: electron tomography / : Martinez M, Chang YW

EMDB-26746:
Plasmodium falciparum merozoite with two rhoptries that lack an apical vesicle
Method: electron tomography / : Martinez M, Chang YW

EMDB-26747:
Plasmodium falciparum merozoite with a fused rhoptry pair
Method: electron tomography / : Martinez M, Chang YW

EMDB-26670:
Rhoptry secretory apparatus of Plasmodium falciparum with an associated apical vesicle
Method: subtomogram averaging / : Martinez M, Chang YW

EMDB-26671:
Rhoptry secretory apparatus of Plasmodium falciparum with an associated rhoptry tip from a non-fused rhoptry pair
Method: subtomogram averaging / : Martinez M, Chang YW

EMDB-26672:
Rhoptry secretory apparatus of Plasmodium falciparum with an associated rhoptry tip from a fused rhoptry pair
Method: subtomogram averaging / : Martinez M, Chang YW

EMDB-0566:
Subtomogram average of the Legionella pneumophila Dot/Icm type IV secretion system with DotF fused to a superfolder GFP (aligning the OM-complex)
Method: subtomogram averaging / : Ghosal D, Jeong KC, Chang YW, Vogel JP, Jensen GJ

EMDB-7474:
Subtomogram average of the cag type IV secretion system in Helicobacter pylori cells (aligning periplasmic parts)
Method: subtomogram averaging / : Chang YW, Shaffer C, Rettberg LA, Ghosal D, Jensen GJ

EMDB-7475:
Subtomogram average of the cag type IV secretion system in Helicobacter pylori cells (aligning cytoplasmic parts)
Method: subtomogram averaging / : Chang YW, Shaffer C, Rettberg LA, Ghosal D, Jensen GJ

EMDB-4230:
Single particle cryo em structure of Mycobacterium tuberculosis RNA polymerase in complex with Fidaxomicin
Method: single particle / : Das K

EMDB-3792:
Electron cryotomogram of Vibrio cholerae O395 N1
Method: electron tomography / : Chang YW, Kjaer A, Ortega DR, Kovacikova G, Sutherland JA, Rettberg LA, Taylor RK, Jensen GJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more