[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 16 items for (author: carlos & oscar & s & sorzano)

EMDB-26380:
Cryo-EM structure of Shiga toxin 2 in complex with the native ribosomal P-stalk
Method: single particle / : Kulczyk AW

EMDB-26381:
Cryo-EM structure of Shiga toxin 2 in complex with the native ribosomal P-stalk
Method: single particle / : Kulczyk AW

PDB-7u6v:
Cryo-EM structure of Shiga toxin 2 in complex with the native ribosomal P-stalk
Method: single particle / : Kulczyk AW

EMDB-12285:
Platelet integrin from intact cells
Method: subtomogram averaging / : Sorrentino S, Conesa JJ, Cuervo A, Melero R, Martins B, Fernandez-Gimenez E, Isidro-Gomez F, Jimenez de la Morena J, Studt JD, Sorzano COS, Eibauer M, Carazo JM, Medalia O

EMDB-11328:
SARS-CoV-2 spike in prefusion state
Method: single particle / : Martinez M, Marabini R, Carazo JM

EMDB-11336:
SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up closed conformation)
Method: single particle / : Martinez M, Marabini R, Carazo JM

EMDB-11337:
SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up open conformation)
Method: single particle / : Martinez M, Marabini R, Carazo JM

EMDB-11341:
SARS-CoV-2 stabilized spike in prefusion state (1-up conformation)
Method: single particle / : Martinez M, Marabini R, Carazo JM

PDB-6zow:
SARS-CoV-2 spike in prefusion state
Method: single particle / : Martinez M, Marabini R, Carazo JM

PDB-6zp5:
SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up closed conformation)
Method: single particle / : Martinez M, Marabini R, Carazo JM

PDB-6zp7:
SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up open conformation)
Method: single particle / : Martinez M, Marabini R, Carazo JM

EMDB-2339:
Variable internal flexibility characterizes the helical capsid formed by Agrobacterium VirE2 protein on single-stranded DNA.
Method: helical / : Bharat TAM, Zbaida D, Eisenstein M, Frankenstein Z, Mehlman T, Weiner L, Sorzano COS, Barak Y, Albeck S, Briggs JAG, Wolf SG, Elbaum M

PDB-4blf:
Variable internal flexibility characterizes the helical capsid formed by Agrobacterium VirE2 protein on single-stranded DNA.
Method: helical / : Bharat TAM, Zbaida D, Eisenstein M, Frankenstein Z, Mehlman T, Weiner L, Sorzano COS, Barak Y, Albeck S, Briggs JAG, Wolf SG, Elbaum M

EMDB-5525:
Electron cryo-microscopy of ABC BmrA in 12-fold symmetry rings
Method: single particle / : Fribourg PF, Chami M, Sorzano CO, Gubellini F, Marabini R, Marco S, Jault JM, Levy D

EMDB-5526:
Electron cryo-microscopy of ABC BmrA in 13-fold symmetry rings
Method: single particle / : Fribourg PF, Chami M, Sorzano CO, Gubellini F, Marabini R, Marco S, Jault JM, Levy D

EMDB-1054:
Large T antigen on the simian virus 40 origin of replication: a 3D snapshot prior to DNA replication.
Method: single particle / : Gomez-Lorenzo MG, Valle M, Frank J, Gruss C, Sorzano COS, Chen XS, Donate L, Carazo JM

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more