[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 22 items for (author: carfi & a)

EMDB-25622:
Negative Stain EM reconstruction of ApexGT3 in complex with two copies of PG9 Fab
Method: single particle / : Berndsen ZT

EMDB-25732:
HIV-1 Envelope ApexGT2.2MUT in complex with PCT64.LMCA Fab
Method: single particle / : Berndsen ZT, Ward AB

EMDB-25733:
HIV-1 Envelope ApexGT2 in complex with PCT64.35S Fab and RM20A3 Fab
Method: single particle / : Berndsen ZT, Ward AB

EMDB-25734:
HIV-1 Envelope ApexGT2 in complex with RM20A3 Fab
Method: single particle / : Berndsen ZT, Ward AB

EMDB-25735:
HIV-1 Envelope ApexGT3 in complex with PG9.iGL Fab
Method: single particle / : Berndsen ZT, Ward AB

EMDB-25736:
HIV-1 Envelope ApexGT3.N130 in complex with PG9 Fab
Method: single particle / : Berndsen ZT, Ward AB

PDB-7t73:
HIV-1 Envelope ApexGT2.2MUT in complex with PCT64.LMCA Fab
Method: single particle / : Berndsen ZT, Ward AB

PDB-7t74:
HIV-1 Envelope ApexGT2 in complex with PCT64.35S Fab and RM20A3 Fab
Method: single particle / : Berndsen ZT, Ward AB

PDB-7t75:
HIV-1 Envelope ApexGT2 in complex with RM20A3 Fab
Method: single particle / : Berndsen ZT, Ward AB

PDB-7t76:
HIV-1 Envelope ApexGT3 in complex with PG9.iGL Fab
Method: single particle / : Berndsen ZT, Ward AB

PDB-7t77:
HIV-1 Envelope ApexGT3.N130 in complex with PG9 Fab
Method: single particle / : Berndsen ZT, Ward AB

EMDB-22519:
The N-terminus of varicella-zoster virus glycoprotein B has a functional role in fusion
Method: single particle / : Oliver SL

EMDB-22520:
The N-terminus of varicella-zoster virus glycoprotein B has a functional role in fusion
Method: single particle / : Oliver SL

EMDB-22629:
The N-terminus of varicella-zoster virus glycoprotein B has a functional role in fusion.
Method: single particle / : Oliver SL

PDB-7k1s:
The N-terminus of varicella-zoster virus glycoprotein B has a functional role in fusion.
Method: single particle / : Oliver SL

EMDB-21247:
A 2.8 Angstrom Cryo-EM Structure of a Glycoprotein B-Neutralizing Antibody Complex Reveals a Critical Domain for Herpesvirus Fusion Initiation
Method: single particle / : Oliver SL

PDB-6vn1:
A 2.8 Angstrom Cryo-EM Structure of a Glycoprotein B-Neutralizing Antibody Complex Reveals a Critical Domain for Herpesvirus Fusion Initiation
Method: single particle / : Oliver SL

EMDB-6431:
RCT reconstruction of CMV gHgLgO and pentameric complexes bound to highly neutralizing antibodies
Method: single particle / : Ciferri C, Cianfrocco MA, Chandramouli S, Carfi A

EMDB-6432:
RCT reconstruction of glycoprotein gHgLgO in complex with neutralizing Fab fragments 3G16 and 13H11
Method: single particle / : Ciferri C, Cianfrocco MA, Chandramouli S, Carfi A

EMDB-6436:
RCT reconstruction of CMV complex
Method: single particle / : Ciferri C, Cianfrocco MA, Chandramouli S, Carfi A

EMDB-6437:
RCT reconstruction of CMV protein complex
Method: single particle / : Ciferri C, Cianfrocco MA, Chandramouli S, Carfi A

EMDB-6438:
Structure of CMV protein complex
Method: single particle / : Ciferri C, Cianfrocco MA, Chandramouli S, Carfi A

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more