[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 304 items for (author: blanc & e)

EMDB-19276:
Cryo-EM of tetrameric collagenase-cleaved Xenopus ZP2-N2N3 (cleaved xZP2-N2N3) (C1)
Method: single particle / : Wiseman B, Nishio S, Jovine L

EMDB-19277:
Cryo-EM of tetrameric collagenase-cleaved Xenopus ZP2-N2N3 (cleaved xZP2-N2N3) (C2)
Method: single particle / : Wiseman B, Nishio S, Jovine L

EMDB-42101:
Complex of the phosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) with CFTRinh-172 and ATP/Mg
Method: single particle / : Young PG, Fiedorczuk K, Chen J

PDB-8ubr:
Complex of the phosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) with CFTRinh-172 and ATP/Mg
Method: single particle / : Young PG, Fiedorczuk K, Chen J

EMDB-16453:
SARS-CoV-2 Omicron Variant Spike Trimer in complex with three 17T2 Fabs
Method: single particle / : Modrego A, Carlero D, Bueno-Carrasco MT, Santiago C, Carolis C, Arranz R, Blanco J, Magri G

EMDB-16473:
SARS-CoV-2 spike in complex with the 17T2 neutralizing antibody Fab fragment (local refinement of RBD and Fab)
Method: single particle / : Modrego A, Carlero D, Bueno-Carrasco MT, Santiago C, Carolis C, Arranz R, Blanco J, Magri G

PDB-8c89:
SARS-CoV-2 spike in complex with the 17T2 neutralizing antibody Fab fragment (local refinement of RBD and Fab)
Method: single particle / : Modrego A, Carlero D, Bueno-Carrasco MT, Santiago C, Carolis C, Arranz R, Blanco J, Magri G

EMDB-16801:
Homo sapiens Get1/Get2 heterotetramer in complex with a Get3 dimer
Method: single particle / : McDowell MA, Heimes M, Wild K, Sinning I

EMDB-16802:
Homo sapiens Get1/Get2 heterotetramer (a3' deletion variant) in complex with a Get3 dimer
Method: single particle / : McDowell MA, Heimes M, Wild K, Sinning I

EMDB-16817:
Chaetomium thermophilum Get1/Get2 heterotetramer in complex with a Get3 dimer (amphipol)
Method: single particle / : McDowell MA, Wild K, Sinning I

EMDB-16819:
Chaetomium thermophilum Get1/Get2 heterotetramer in complex with a Get3 dimer (nanodisc)
Method: single particle / : McDowell MA, Wild K, Sinning I

PDB-8cr1:
Homo sapiens Get1/Get2 heterotetramer in complex with a Get3 dimer
Method: single particle / : McDowell MA, Heimes M, Wild K, Sinning I

PDB-8cr2:
Homo sapiens Get1/Get2 heterotetramer (a3' deletion variant) in complex with a Get3 dimer
Method: single particle / : McDowell MA, Heimes M, Wild K, Sinning I

PDB-8odu:
Chaetomium thermophilum Get1/Get2 heterotetramer in complex with a Get3 dimer (amphipol)
Method: single particle / : McDowell MA, Wild K, Sinning I

PDB-8odv:
Chaetomium thermophilum Get1/Get2 heterotetramer in complex with a Get3 dimer (nanodisc)
Method: single particle / : McDowell MA, Wild K, Sinning I

EMDB-16888:
Cryo-EM structure of ADP-bound, filamentous beta-actin harboring the R183W mutation
Method: single particle / : Oosterheert W, Blanc FEC, Roy A, Belyy A, Hofnagel O, Hummer G, Bieling P, Raunser S

PDB-8oi8:
Cryo-EM structure of ADP-bound, filamentous beta-actin harboring the R183W mutation
Method: single particle / : Oosterheert W, Blanc FEC, Roy A, Belyy A, Hofnagel O, Hummer G, Bieling P, Raunser S

EMDB-16887:
Cryo-EM structure of the undecorated barbed end of filamentous beta/gamma actin
Method: single particle / : Oosterheert W, Blanc FEC, Roy A, Belyy A, Hofnagel O, Hummer G, Bieling P, Raunser S

EMDB-16889:
Cryo-EM structure of ADP-bound, filamentous beta-actin harboring the N111S mutation
Method: single particle / : Oosterheert W, Blanc FEC, Roy A, Belyy A, Hofnagel O, Hummer G, Bieling P, Raunser S

PDB-8oi6:
Cryo-EM structure of the undecorated barbed end of filamentous beta/gamma actin
Method: single particle / : Oosterheert W, Blanc FEC, Roy A, Belyy A, Hofnagel O, Hummer G, Bieling P, Raunser S

PDB-8oid:
Cryo-EM structure of ADP-bound, filamentous beta-actin harboring the N111S mutation
Method: single particle / : Oosterheert W, Blanc FEC, Roy A, Belyy A, Hofnagel O, Hummer G, Bieling P, Raunser S

EMDB-26855:
Arabidopsis DDM1 bound to nucleosome (H2A.W, H2B, H3.3, H4, with 147 bp DNA)
Method: single particle / : Ipsaro JJ, Adams DW, Joshua-Tor L

PDB-7ux9:
Arabidopsis DDM1 bound to nucleosome (H2A.W, H2B, H3.3, H4, with 147 bp DNA)
Method: single particle / : Ipsaro JJ, Adams DW, Joshua-Tor L

EMDB-27581:
Cryo-EM structure of the human Sec61 complex in a partially-open apo state (Class 1)
Method: single particle / : Park E, Itskanov S

EMDB-27582:
Cryo-EM structure of the human Sec61 complex in a partially-open apo state (Class 2)
Method: single particle / : Park E, Itskanov S

EMDB-27583:
Cryo-EM structure of the human Sec61 complex inhibited by cotransin
Method: single particle / : Park E, Itskanov S

EMDB-27584:
Cryo-EM structure of the human Sec61 complex inhibited by decatransin
Method: single particle / : Park E, Itskanov S

EMDB-27585:
Cryo-EM structure of the human Sec61 complex inhibited by apratoxin F
Method: single particle / : Park E, Itskanov S

EMDB-27586:
Cryo-EM structure of the human Sec61 complex inhibited by mycolactone
Method: single particle / : Park E, Itskanov S

EMDB-27587:
Cryo-EM structure of the human Sec61 complex inhibited by ipomoeassin F
Method: single particle / : Park E, Itskanov S

EMDB-27588:
Cryo-EM structure of the human Sec61 complex inhibited by cyclotriazadisulfonamide (CADA)
Method: single particle / : Park E, Itskanov S

EMDB-27589:
Cryo-EM structure of the human Sec61 complex inhibited by eeyarestatin I
Method: single particle / : Park E, Itskanov S

EMDB-29608:
Cryo-EM map of chimeric Sec complex (human Sec61 and yeast Sec63-71-72) inhibited by eeyarestatin I
Method: single particle / : Park E, Itskanov S

EMDB-29609:
Cryo-EM map of chimeric Sec complex (human Sec61 and yeast Sec63-71-72) inhibited by cotransin
Method: single particle / : Park E, Itskanov S

EMDB-29610:
Cryo-EM map of chimeric Sec complex (human Sec61 and yeast Sec63-71-72) inhibited by apratoxin F
Method: single particle / : Park E, Itskanov S

EMDB-29611:
Cryo-EM map of chimeric Sec complex (human Sec61 and yeast Sec63-71-72) in a partially-open apo state (Class 1)
Method: single particle / : Park E, Itskanov S

EMDB-29612:
Cryo-EM map of chimeric Sec complex (human Sec61 and yeast Sec63-71-72) in a partially-open apo state (Class 2)
Method: single particle / : Park E, Itskanov S

EMDB-29613:
Cryo-EM map of chimeric Sec complex (human Sec61 and yeast Sec63-71-72) inhibited by decatransin
Method: single particle / : Park E, Itskanov S

EMDB-29614:
Cryo-EM map of chimeric Sec complex (human Sec61 and yeast Sec63-71-72) inhibited by ipomoeassin F (Class 1)
Method: single particle / : Park E, Itskanov S

EMDB-29616:
Cryo-EM map of chimeric Sec complex (human Sec61 and yeast Sec63-71-72) inhibited by cyclotriazadisulfonamide (CADA)
Method: single particle / : Park E, Itskanov S

EMDB-29617:
Cryo-EM map of chimeric Sec complex (human Sec61 and yeast Sec63-71-72) inhibited by mycolactone
Method: single particle / : Park E, Itskanov S

EMDB-29635:
Cryo-EM map of chimeric Sec complex (human Sec61 and yeast Sec63-71-72) inhibited by ipomoeassin F (Class 2)
Method: single particle / : Park E, Itskanov S

PDB-8dnv:
Cryo-EM structure of the human Sec61 complex in a partially-open apo state (Class 1)
Method: single particle / : Park E, Itskanov S

PDB-8dnw:
Cryo-EM structure of the human Sec61 complex in a partially-open apo state (Class 2)
Method: single particle / : Park E, Itskanov S

PDB-8dnx:
Cryo-EM structure of the human Sec61 complex inhibited by cotransin
Method: single particle / : Park E, Itskanov S

PDB-8dny:
Cryo-EM structure of the human Sec61 complex inhibited by decatransin
Method: single particle / : Park E, Itskanov S

PDB-8dnz:
Cryo-EM structure of the human Sec61 complex inhibited by apratoxin F
Method: single particle / : Park E, Itskanov S

PDB-8do0:
Cryo-EM structure of the human Sec61 complex inhibited by mycolactone
Method: single particle / : Park E, Itskanov S

PDB-8do1:
Cryo-EM structure of the human Sec61 complex inhibited by ipomoeassin F
Method: single particle / : Park E, Itskanov S

PDB-8do2:
Cryo-EM structure of the human Sec61 complex inhibited by cyclotriazadisulfonamide (CADA)
Method: single particle / : Park E, Itskanov S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more