[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 57 items for (author: black & ss)

EMDB-40180:
MsbA bound to cerastecin C
Method: single particle / : Chen Y, Klein D

EMDB-41284:
Combined linker domain of N-DRC and associated proteins Tetrahymena
Method: single particle / : Ghanaeian AG, Majhi SM, McCaffrey CM, Nami BN, Black CB, Yang SK, Legal TL, Papoulas OP, Janowska MJ, Valente-Paterno MV, Marcotte EM, Wloga DW, Bui KH

PDB-8tid:
Combined linker domain of N-DRC and associated proteins Tetrahymena
Method: single particle / : Ghanaeian AG, Majhi SM, McCaffrey CM, Nami BN, Black CB, Yang SK, Legal TL, Papoulas OP, Janowska MJ, Valente-Paterno MV, Marcotte EM, Wloga DW, Bui KH

EMDB-41189:
Baseplate of Nexin-dynein regulatory complex from Tetrahymena thermophila
Method: single particle / : Ghanaeian AG, Black CS, Yang SK, Bui KH

EMDB-41251:
Linker domain of Nexin-dynein regulatory complex from Tetrahymena thermophila
Method: single particle / : Ghanaeian AG, Bui KH

EMDB-41270:
Focused refinement of the N-DRC from the Tetrahymena WT subtomo
Method: subtomogram averaging / : Ghanaeian AG, Majhi SM, McCaffrey CM, Nami BN, Black CB, Yang SK, Legal TL, Papoulas OP, Janowska MJ, Valente-Paterno MV, Marcotte EM, Wloga DW, Bui KH

EMDB-41375:
Linker domain of N-DRC complex from Tetrahymena thermophila
Method: single particle / : Ghanaeian AG, Bui KH

EMDB-41376:
96nm repeat of Doublet microtubule from Tetrahymena thermophila
Method: single particle / : Ghanaeian AG, Bui KH

EMDB-41504:
DRC9/10 baseplate from Tetrahymena thermophila
Method: single particle / : Ghanaeian AG, Bui KH

PDB-8tek:
Baseplate of Nexin-dynein regulatory complex from Tetrahymena thermophila
Method: single particle / : Ghanaeian AG, Black CS, Yang SK, Bui KH

PDB-8th8:
Linker domain of Nexin-dynein regulatory complex from Tetrahymena thermophila
Method: single particle / : Ghanaeian AG, Bui KH

EMDB-40891:
Main central pair structure
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-40892:
Ciliary cap complex from Tetrahymena thermophila
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-40894:
Singlet A-tubule from Tetrahymena thermophila
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-40896:
Tip central pair consensus map from Tetrahymena thermophila cilia
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-40897:
C1 refinement of the tip central pair subtomogram average
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-40898:
C1 MAPS refinement of ciliary tip central pair subtomogram average
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-40899:
C2 refinement of ciliary tip central pair subtomogram average
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-40900:
C2 MAPs refinement of ciliary tip central pair subtomogram average
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-40909:
Ciliary tip central pair map of FAP256-KO Tetrahymena thermophila (consensus map)
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-40910:
Ciliary tip central pair map of FAP256-KO Tetrahymena thermophila (C1 refinement)
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-40911:
Ciliary tip central pair map of FAP256-KO Tetrahymena thermophila (C2 refinement)
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-40912:
Ciliary tip central pair map of FAP256-KO Tetrahymena thermophila (composite map)
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-40913:
Ciliary tip tomogram of Tetrahymena thermophila
Method: electron tomography / : Legal T, Bui KH

EMDB-40299:
Consensus refinement of the h12-LOX in a dimeric form
Method: single particle / : Black KA, Mobbs JI, Venugopal H, Thal DM, Glukhova A

EMDB-40300:
The local refinement map of a "closed" subunit of a 12-LOX dimer
Method: single particle / : Black KA, Mobbs JI, Venugopal H, Thal DM, Glukhova A

EMDB-40301:
The local refinement map of an "open" subunit of a 12-LOX dimer
Method: single particle / : Black KA, Mobbs JI, Venugopal H, Thal DM, Glukhova A

EMDB-40302:
The consensus map of a 12-LOX hexamer
Method: single particle / : Black KA, Mobbs JI, Venugopal H, Thal DM, Glukhova A

EMDB-40304:
The local refinement map of a single subunit of a 12-LOX hexamer
Method: single particle / : Black KA, Mobbs JI, Venugopal H, Thal DM, Glukhova A

EMDB-40039:
The structure of h12-LOX in monomeric form
Method: single particle / : Black KA, Mobbs JI, Venugopal H, Thal DM, Glukhova A

EMDB-40040:
The structure of h12-LOX in dimeric form
Method: single particle / : Black KA, Mobbs JI, Venugopal H, Thal DM, Glukhova A

EMDB-40041:
The structure of h12-LOX in hexameric form bound to inhibitor ML355 and arachidonic acid
Method: single particle / : Black KA, Mobbs JI, Venugopal H, Thal DM, Glukhova A

EMDB-40042:
The structure of h12-LOX in tetrameric form bound to endogenous inhibitor oleoyl-CoA
Method: single particle / : Black KA, Mobbs JI, Venugopal H, Thal DM, Glukhova A

PDB-8ghb:
The structure of h12-LOX in monomeric form
Method: single particle / : Black KA, Mobbs JI, Venugopal H, Thal DM, Glukhova A

PDB-8ghc:
The structure of h12-LOX in dimeric form
Method: single particle / : Black KA, Mobbs JI, Venugopal H, Thal DM, Glukhova A

PDB-8ghd:
The structure of h12-LOX in hexameric form bound to inhibitor ML355 and arachidonic acid
Method: single particle / : Black KA, Mobbs JI, Venugopal H, Thal DM, Glukhova A

PDB-8ghe:
The structure of h12-LOX in tetrameric form bound to endogenous inhibitor oleoyl-CoA
Method: single particle / : Black KA, Mobbs JI, Venugopal H, Thal DM, Glukhova A

EMDB-16847:
CryoEM structure of holo e4D2
Method: single particle / : Yadav KNS, Hutchins G, Berger Schaffitzel C, Anderson R

EMDB-29666:
96-nm repeat unit of intact doublet microtubule from Tetrahymena thermophila CFAP77AB-KO mutant
Method: subtomogram averaging / : Black CS, Legal T, Bui KH

EMDB-29667:
96-nm repeat unit of intact doublet microtubule from Tetrahymena thermophila strain CU428
Method: subtomogram averaging / : Black CS, Legal T, Bui KH

EMDB-29685:
48-nm doublet microtubule from Tetrahymena thermophila strain CU428
Method: single particle / : Black CS, Kubo S, Yang SK, Bui KH

EMDB-29692:
48-nm doublet microtubule from Tetrahymena thermophila strain K40R
Method: single particle / : Black CS, Kubo S, Yang SK, Bui KH

EMDB-29693:
96-nm doublet microtubule from combined Tetrahymena thermophila strains CU428 and K40R
Method: single particle / : Black CS, Kubo S, Yang SK, Bui KH

PDB-8g2z:
48-nm doublet microtubule from Tetrahymena thermophila strain CU428
Method: single particle / : Black CS, Kubo S, Yang SK, Bui KH

PDB-8g3d:
48-nm doublet microtubule from Tetrahymena thermophila strain K40R
Method: single particle / : Black CS, Kubo S, Yang SK, Bui KH

EMDB-29684:
Cryo-EM structure of ADGRF1 coupled to miniGs/q
Method: single particle / : Jones D, Rawson S, Blacklow S

PDB-8g2y:
Cryo-EM structure of ADGRF1 coupled to miniGs/q
Method: single particle / : Jones D, Rawson S, Blacklow S

EMDB-29044:
Structure of Zanidatamab bound to HER2
Method: single particle / : Worrall LJ, Atkinson CE, Sanches M, Dixit S, Strynadka NCJ

EMDB-23926:
The structure of the Tetrahymena thermophila outer dynein arm on doublet microtubule
Method: single particle / : Kubo S, Yang SK, Ichikawa M, Bui KH

PDB-7moq:
The structure of the Tetrahymena thermophila outer dynein arm on doublet microtubule
Method: single particle / : Kubo S, Yang SK, Ichikawa M, Bui KH

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more