[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 69 items for (author: antonin & w)

EMDB-17195:
CryoEM reconstruction of a TRAP protein cage made out of 12 11-membered rings
Method: single particle / : Biela AP

EMDB-17196:
Structure of the protein cage composed of 12 identical 12-membered protein rings
Method: single particle / : Biela AP

EMDB-29281:
Cryo-EM structure of STING oligomer bound to cGAMP and NVS-STG2
Method: single particle / : Li J, Canham SM, Zhang X, Bai X, Feng Y

EMDB-29282:
Cryo-EM structure of STING oligomer bound to cGAMP, NVS-STG2 and C53
Method: single particle / : Li J, Canham SM, Zhang X, Bai X, Feng Y

PDB-8flk:
Cryo-EM structure of STING oligomer bound to cGAMP and NVS-STG2
Method: single particle / : Li J, Canham SM, Zhang X, Bai X, Feng Y

PDB-8flm:
Cryo-EM structure of STING oligomer bound to cGAMP, NVS-STG2 and C53
Method: single particle / : Li J, Canham SM, Zhang X, Bai X, Feng Y

EMDB-14502:
Cryo-tomogram of FIB-sectioned Brl1-depleted yeast cell
Method: electron tomography / : Kralt A, Wojtynek M, Fischer JS, Agote-Aran A, Mancini R, Dultz E, Noor E, Uliana F, Tatarek-Nossol M, Antonin W, Onischenko E, Medalia O, Weis K

EMDB-14503:
Cryo-tomogram of FIB-sectioned non-depleted Brl1 control cells
Method: electron tomography / : Kralt A, Wojtynek M, Fischer JS, Agote-Aran A, Mancini R, Dultz E, Noor E, Uliana F, Tatarek-Nossol M, Antonin W, Onischenko E, Medalia O, Weis K

EMDB-14505:
Cryo-tomogram of FIB-sectioned Brl1(I395D) overexpressing cells
Method: electron tomography / : Kralt A, Wojtynek M, Fischer JS, Agote-Aran A, Mancini R, Dultz E, Noor E, Uliana F, Tatarek-Nossol M, Antonin W, Onischenko E, Medalia O, Weis K

EMDB-14506:
Cryo-tomogram of a FIB-sectioned Brl1-overexpressing cell
Method: electron tomography / : Kralt A, Wojtynek M, Fischer JS, Agote-Aran A, Mancini R, Dultz E, Noor E, Uliana F, Tatarek-Nossol M, Antonin W, Onischenko E, Medalia O, Weis K

EMDB-12778:
MS2 coat protein dimer with 145-AHIVMVDAYKPTKGT-159 SpyTag insertion VLP displaying icosahedral T=3 symmetry
Method: single particle / : Biela AP

EMDB-12779:
MS2 coat protein dimer with 145-AHIVMVDAYKPTKGT-159 SpyTag insertion VLP displaying icosahedral T=4 symmetry
Method: single particle / : Biela AP

EMDB-12780:
MS2 coat protein dimer with 145-AHIVMVDAYKPTKGT-159 SpyTag insertion VLP displaying fullerene C70-like D5 symmetry
Method: single particle / : Biela AP

EMDB-12781:
MS2 coat protein dimer with 145-GGGSAHIVMVDAYKPTKGGGSGT-167 insertion VLP displaying icosahedral T=3 symmetry
Method: single particle / : Biela AP

EMDB-12782:
MS2 coat protein dimer with 145-GGGSAHIVMVDAYKPTKGGGSGT-167 insertion VLP displaying icosahedral T=4 symmetry
Method: single particle / : Biela AP

EMDB-12783:
MS2 coat protein dimer with 145-GGGSAHIVMVDAYKPTKGGGSGT-167 insertion VLP displaying fullerene C70-like D5 symmetry
Method: single particle / : Biela AP

EMDB-12784:
MS2 coat protein dimer with 145-GGGSAHIVMVDAYKPTKGGGSGT-167 insertion VLP displaying fullerene C74-like D3 symmetry
Method: single particle / : Biela AP

EMDB-12785:
MS2 coat protein dimer with 145-GGGSYATMPIAKHVKDVGGGSGT-167 insertion VLP displaying icosahedral T=3 symmetry
Method: single particle / : Biela AP

EMDB-12786:
MS2 coat protein dimer with 145-GGGSYATMPIAKHVKDVGGGSGT-167 insertion VLP displaying icosahedral T=4 symmetry
Method: single particle / : Biela AP

EMDB-12787:
MS2 coat protein dimer with 145-GGGSYATMPIAKHVKDVGGGSGT-167 insertion VLP displaying fullerene C70-like D5 symmetry
Method: single particle / : Biela AP

EMDB-12788:
MS2 coat protein dimer with 145-GGGSYATMPIAKHVKDVGGGSGT-167 insertion VLP displaying fullerene C74-like D3 symmetry
Method: single particle / : Biela AP

EMDB-12789:
MS2 coat protein dimer with 145-GGGSYATMPIAKHVKDVGGGSGT-167 insertion VLP displaying fullerene C78-like D3 symmetry
Method: single particle / : Biela AP

EMDB-12790:
MS2 coat protein dimer with 145-GSGGGGSAHIVMVDAYKPTKGGGSGGSGT-173 insertion VLP displaying icosahedral T=3 symmetry
Method: single particle / : Biela AP

EMDB-12791:
MS2 coat protein dimer with 145-GSGGGGSAHIVMVDAYKPTKGGGSGGSGT-173 insertion VLP displaying icosahedral T=4 symmetry
Method: single particle / : Biela AP

EMDB-12792:
MS2 coat protein dimer with 145-GSGGGGSAHIVMVDAYKPTKGGGSGGSGT-173 insertion VLP displaying fullerene C70-like D5 symmetry
Method: single particle / : Biela AP

EMDB-12793:
MS2 coat protein dimer with 145-GSGGGGSAHIVMVDAYKPTKGGGSGGSGT-173 insertion VLP displaying fullerene C74-like D3 symmetry
Method: single particle / : Biela AP

EMDB-24533:
SARS-CoV-2 spike protein bound to the S2P6 and S2M11 Fab fragments
Method: single particle / : Sauer MM, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-4643:
HsCKK (human CAMSAP1) decorated 13pf taxol-GDP microtubule
Method: single particle / : Atherton JM, Luo Y, Xiang S, Yang C, Jiang K, Stangier M, Vemu A, Cook A, Wang S, Roll-Mecak A, Steinmetz MO, Akhmanova A, Baldus M, Moores CA

EMDB-4644:
NgCKK (N.Gruberi CKK) decorated 13pf taxol-GDP microtubule
Method: single particle / : Atherton JM, Luo Y, Xiang S, Yang C, Jiang K, Stangier M, Vemu A, Cook A, Wang S, Roll-Mecak A, Steinmetz MO, Akhmanova A, Baldus M, Moores CA

EMDB-4650:
NgCKK (Naegleria Gruberi CKK) decorated 14pf taxol-GDP microtubule
Method: single particle / : Atherton JM, Luo Y, Xiang S, Yang C, Jiang K, Stangier M, Vemu A, Cook A, Wang S, Roll-Mecak A, Steinmetz MO, Akhmanova A, Baldus M, Moores CA

EMDB-4654:
HsCKK (human CAMSAP1) decorated 14pf taxol-GDP microtubule
Method: single particle / : Atherton JM, Luo Y, Xiang S, Yang C, Jiang K, Stangier M, Vemu A, Cook A, Wang S, Roll-Mecak A, Steinmetz MO, Akhmanova A, Baldus M, Moores CA

PDB-6qus:
HsCKK (human CAMSAP1) decorated 13pf taxol-GDP microtubule
Method: single particle / : Atherton JM, Luo Y, Xiang S, Yang C, Jiang K, Stangier M, Vemu A, Cook A, Wang S, Roll-Mecak A, Steinmetz MO, Akhmanova A, Baldus M, Moores CA

PDB-6quy:
NgCKK (N.Gruberi CKK) decorated 13pf taxol-GDP microtubule
Method: single particle / : Atherton JM, Luo Y, Xiang S, Yang C, Jiang K, Stangier M, Vemu A, Cook A, Wang S, Roll-Mecak A, Steinmetz MO, Akhmanova A, Baldus M, Moores CA

PDB-6qve:
NgCKK (Naegleria Gruberi CKK) decorated 14pf taxol-GDP microtubule
Method: single particle / : Atherton JM, Luo Y, Xiang S, Yang C, Jiang K, Stangier M, Vemu A, Cook A, Wang S, Roll-Mecak A, Steinmetz MO, Akhmanova A, Baldus M, Moores CA

PDB-6qvj:
HsCKK (human CAMSAP1) decorated 14pf taxol-GDP microtubule
Method: single particle / : Atherton JM, Luo Y, Xiang S, Yang C, Jiang K, Stangier M, Vemu A, Cook A, Wang S, Roll-Mecak A, Steinmetz MO, Akhmanova A, Baldus M, Moores CA

EMDB-20761:
Katanin hexamer in the spiral conformation in complex with substrate
Method: single particle / : Zehr EA, Roll-Mecak A

EMDB-20762:
Katanin hexamer in the ring conformation in complex with substrate
Method: single particle / : Zehr EA, Roll-Mecak A

EMDB-20763:
Katanin hexamer in the ring conformation with resolved protomer one in complex with substrate
Method: single particle / : Zehr EA, Roll-Mecak A

PDB-6ugd:
Katanin hexamer in the spiral conformation in complex with substrate
Method: single particle / : Zehr EA, Roll-Mecak A

PDB-6uge:
Katanin hexamer in the ring conformation in complex with substrate
Method: single particle / : Zehr EA, Roll-Mecak A

PDB-6ugf:
Katanin hexamer in the ring conformation with resolved protomer one in complex with substrate
Method: single particle / : Zehr EA, Roll-Mecak A

EMDB-10039:
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles (State V - subclass 1)
Method: single particle / : Kargas V, Warren AJ

EMDB-10066:
Cryo-EM structure of Lsg1-TAP pre-60S ribosomal particles (State I - subclass 1)
Method: single particle / : Kargas V, Warren AJ

EMDB-10067:
Cryo-EM structure of Lsg1-TAP ribosomal subunit (State I - subclass 2)
Method: single particle / : Kargas V, Warren AJ

EMDB-10068:
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
Method: single particle / : Kargas V, Warren AJ

EMDB-10070:
Cryo-EM structure of Lsg1-TAP pre-60S ribosomal particles (State II - subclass 1)
Method: single particle / : Kargas V, Warren AJ

EMDB-10071:
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
Method: single particle / : Kargas V, Warren AJ

EMDB-4560:
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
Method: single particle / : Kargas V, Warren AJ

EMDB-4630:
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
Method: single particle / : Kargas V, Warren AJ

EMDB-4636:
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
Method: single particle / : Kargas V, Warren AJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more