[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 155 items for (author: adam & s & olia)

EMDB-28617:
Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01 FAB
Method: single particle / : Pletnev S, Kwong P

EMDB-28618:
Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-COMBO1 FAB
Method: single particle / : Pletnev S, Kwong P

EMDB-28619:
Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-MM28 FAB
Method: single particle / : Pletnev S, Kwong P

PDB-8euu:
Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01 FAB
Method: single particle / : Pletnev S, Kwong P

PDB-8euv:
Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-COMBO1 FAB
Method: single particle / : Pletnev S, Kwong P

PDB-8euw:
Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-MM28 FAB
Method: single particle / : Pletnev S, Kwong P

EMDB-28910:
Glycan-Base ConC Env Trimer
Method: single particle / : Olia AS, Kwong PD

PDB-8f7t:
Glycan-Base ConC Env Trimer
Method: single particle / : Olia AS, Kwong PD

EMDB-29725:
Vaccine-elicited human antibody 2C06 in complex with HIV-1 envelope trimer BG505 DS-SOSIP
Method: single particle / : Wang S, Morano NC, Shapiro L, Kwong PD

EMDB-29731:
Vaccine-elicited human antibody 2C09 in complex with HIV-1 envelope trimer BG505 DS-SOSIP
Method: single particle / : Wang S, Kwong PD

PDB-8g4m:
Vaccine-elicited human antibody 2C06 in complex with HIV-1 envelope trimer BG505 DS-SOSIP
Method: single particle / : Wang S, Morano NC, Shapiro L, Kwong PD

PDB-8g4t:
Vaccine-elicited human antibody 2C09 in complex with HIV-1 envelope trimer BG505 DS-SOSIP
Method: single particle / : Wang S, Kwong PD

EMDB-29396:
Antibody vFP53.02 in complex with HIV-1 envelope trimer BG505 DS-SOSIP
Method: single particle / : Wang S, Kwong PD

EMDB-29836:
vFP52.02 Fab in complex with BG505 DS-SOSIP Env trimer
Method: single particle / : Gorman J, Kwong PD

EMDB-29880:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 1)
Method: single particle / : Changela A, Gorman J, Kwong PD

EMDB-29881:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 2)
Method: single particle / : Changela A, Gorman J, Kwong PD

EMDB-29882:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 3)
Method: single particle / : Changela A, Gorman J, Kwong PD

EMDB-29905:
vFP48.02 Fab in complex with BG505 DS-SOSIP Env trimer
Method: single particle / : Gorman J, Kwong PD

PDB-8fr6:
Antibody vFP53.02 in complex with HIV-1 envelope trimer BG505 DS-SOSIP
Method: single particle / : Wang S, Kwong PD

PDB-8g85:
vFP52.02 Fab in complex with BG505 DS-SOSIP Env trimer
Method: single particle / : Gorman J, Kwong PD

PDB-8g9w:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 1)
Method: single particle / : Changela A, Gorman J, Kwong PD

PDB-8g9x:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 2)
Method: single particle / : Changela A, Gorman J, Kwong PD

PDB-8g9y:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 3)
Method: single particle / : Changela A, Gorman J, Kwong PD

PDB-8gas:
vFP48.02 Fab in complex with BG505 DS-SOSIP Env trimer
Method: single particle / : Gorman J, Kwong PD

EMDB-26157:
Cryo-EM structure of BG505 SOSIP HIV-1 Env trimer in complex with CD4 receptor (D1D2) and broadly neutralizing darpin bnD.9
Method: single particle / : Cerutti G, Gorman J

PDB-7txd:
Cryo-EM structure of BG505 SOSIP HIV-1 Env trimer in complex with CD4 receptor (D1D2) and broadly neutralizing darpin bnD.9
Method: single particle / : Cerutti G, Gorman J, Kwong PD, Shapiro L

EMDB-29209:
Structure of Bispecific CAP256V2LS-J3 Fab in complex with BG505 DS-SOSIP.664
Method: single particle / : Gorman J, Kwong PD

PDB-8fis:
Structure of Bispecific CAP256V2LS-J3 Fab in complex with BG505 DS-SOSIP.664
Method: single particle / : Gorman J, Kwong PD

EMDB-26200:
Cryo-EM structure of SARS-CoV-2 spike in complex with FSR22, an anti-SARS-CoV-2 DARPin
Method: single particle / : Kwon YD, Gorman J, Kwong PD

EMDB-26201:
Cryo-EM structure of SARS-CoV-2 spike in complex with FSR22, an anti-SARS-CoV-2 DARPin (Local refinement of FSR22 and RBD)
Method: single particle / : Kwon YD, Gorman J, Kwong PD

EMDB-27749:
Cryo-EM structure of SARS-CoV-2 RBD in complex with anti-SARS-CoV-2 DARPin,SR22, and two antibody Fabs, S309 and CR3022
Method: single particle / : Kwon YD, Gorman J, Kwong PD

EMDB-27750:
Cryo-EM structure of SARS-CoV-2 RBD in complex with anti-SARS-CoV-2 DARPin,SR16m, and two antibody Fabs, S309 and CR3022
Method: single particle / : Kwon YD, Gorman J, Kwong PD

PDB-7tyz:
Cryo-EM structure of SARS-CoV-2 spike in complex with FSR22, an anti-SARS-CoV-2 DARPin
Method: single particle / : Kwon YD, Gorman J, Kwong PD

PDB-7tz0:
Cryo-EM structure of SARS-CoV-2 spike in complex with FSR22, an anti-SARS-CoV-2 DARPin (Local refinement of FSR22 and RBD)
Method: single particle / : Kwon YD, Gorman J, Kwong PD

PDB-8dw2:
Cryo-EM structure of SARS-CoV-2 RBD in complex with anti-SARS-CoV-2 DARPin,SR22, and two antibody Fabs, S309 and CR3022
Method: single particle / : Kwon YD, Gorman J, Kwong PD

PDB-8dw3:
Cryo-EM structure of SARS-CoV-2 RBD in complex with anti-SARS-CoV-2 DARPin,SR16m, and two antibody Fabs, S309 and CR3022
Method: single particle / : Kwon YD, Gorman J, Kwong PD

EMDB-26401:
SARS-CoV-2 spike trimer in complex with Fab NE12, ensemble map
Method: single particle / : Tsybovsky Y, Kwong PD, Farci P

EMDB-26402:
SARS-CoV-2 spike trimer in complex with Fab NE12, local refinement map
Method: single particle / : Tsybovsky Y, Kwong PD, Farci P

EMDB-26403:
SARS-CoV-2 spike trimer in complex with Fab NA8, ensemble map
Method: single particle / : Tsybovsky Y, Kwong PD, Farci P

EMDB-26404:
SARS-CoV-2 spike trimer in complex with Fab NA8, local refinement map
Method: single particle / : Tsybovsky Y, Kwong PD, Farci P

PDB-7u9o:
SARS-CoV-2 spike trimer RBD in complex with Fab NE12
Method: single particle / : Tsybovsky Y, Kwong PD, Farci P

PDB-7u9p:
SARS-CoV-2 spike trimer RBD in complex with Fab NA8
Method: single particle / : Tsybovsky Y, Kwong PD, Farci P

EMDB-24128:
Cryo-EM structure of broadly neutralizing V2-apex-targeting antibody J033 in complex with HIV-1 Env
Method: single particle / : Zhou T, Gao F

PDB-7n28:
Cryo-EM structure of broadly neutralizing V2-apex-targeting antibody J033 in complex with HIV-1 Env
Method: single particle / : Zhou T, Gao F

EMDB-25794:
Cryo-EM structure of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1
Method: single particle / : Zhou T, Tsybovsky T, Kwong PD

EMDB-25797:
Locally refined region of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1
Method: single particle / : Zhou T, Tsybovsky T, Kwong PD

EMDB-25806:
Locally refined region of SARS-CoV-2 spike in complex with antibody A19-46.1
Method: single particle / : Zhou T, Kwong PD

EMDB-25807:
Cryo-EM structure of SARS-CoV-2 Omicron spike in complex with antibody A19-46.1
Method: single particle / : Zhou T, Kwong PD

EMDB-25808:
Cryo-EM structure of SARS-CoV-2 Omicron spike in complex with antibodies A19-46.1 and B1-182.1
Method: single particle / : Zhou T, Kwong PD

EMDB-26256:
Local refinement of cryo-EM structure of the interface of the Omicron RBD in complex with antibodies B-182.1 and A19-46.1
Method: single particle / : Zhou T, kwong PD

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more