[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 53,359 items (all data)

EMDB-40918:
Human glutaminase C (Y466W) with L-Gln and Pi, filamentous form
Method: helical / : Feng S, Aplin C, Nguyen TTT, Milano SK, Cerione RA

EMDB-40920:
Human liver-type glutaminase (Apo form)
Method: single particle / : Feng S, Aplin C, Nguyen TTT, Milano SK, Cerione RA

EMDB-40950:
Human liver-type glutaminase (K253A) with L-Gln, filamentous form
Method: helical / : Feng S, Aplin C, Nguyen TTT, Milano SK, Cerione RA

EMDB-43533:
Human liver-type glutaminase, bound with inhibitor Compound 968
Method: single particle / : Feng S, Aplin C, Nguyen TTT, Milano SK, Cerione RA

PDB-8szj:
Human glutaminase C (Y466W) with L-Gln and Pi, filamentous form
Method: helical / : Feng S, Aplin C, Nguyen TTT, Milano SK, Cerione RA

PDB-8szl:
Human liver-type glutaminase (Apo form)
Method: single particle / : Feng S, Aplin C, Nguyen TTT, Milano SK, Cerione RA

PDB-8t0z:
Human liver-type glutaminase (K253A) with L-Gln, filamentous form
Method: helical / : Feng S, Aplin C, Nguyen TTT, Milano SK, Cerione RA

EMDB-19042:
MAP7 MTBD (microtubule binding domain) decorated microtubule protofilament
Method: single particle / : Bangera M, Moores CA

EMDB-19043:
MAP7 MTBD (microtubule binding domain) decorated Taxol stabilized microtubule (13pf) protofilament
Method: single particle / : Bangera M, Moores CA

EMDB-19044:
MAP7 MTBD (microtubule binding domain) decorated Taxol stabilized microtubule (14pf) protofilament
Method: single particle / : Bangera M, Moores CA

PDB-8rc1:
MAP7 MTBD (microtubule binding domain) decorated microtubule protofilament
Method: single particle / : Bangera M, Moores CA

EMDB-41816:
Cryo-EM structure of the RAF1-HSP90-CDC37 complex in the closed state
Method: single particle / : Finci LI, Simanshu DK

EMDB-41817:
Cryo-EM structure of the HSP90 dimer (NTD-MD) in the semi-open state
Method: single particle / : Finci LI, Simanshu DK

EMDB-41818:
Cryo-EM structure of the cross-linked HSP90 dimer (NTD-MD) in the semi-open state
Method: single particle / : Finci LI, Simanshu DK

PDB-8u1l:
Cryo-EM structure of the RAF1-HSP90-CDC37 complex in the closed state
Method: single particle / : Finci LI, Simanshu DK

PDB-8u1m:
Cryo-EM structure of the HSP90 dimer (NTD-MD) in the semi-open state
Method: single particle / : Finci LI, Simanshu DK

PDB-8u1n:
Cryo-EM structure of the cross-linked HSP90 dimer (NTD-MD) in the semi-open state
Method: single particle / : Finci LI, Simanshu DK

EMDB-18920:
Plastid-encoded RNA polymerase (consensus map)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-18935:
Plastid-encoded RNA polymerase
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-18952:
Plastid-encoded RNA polymerase transcription elongation complex (consensus map)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-18964:
Plastid-encoded RNA polymerase (Region 1)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-18965:
Plastid-encoded RNA polymerase (Region 2)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-18974:
Plastid-encoded RNA polymerase (Region 3)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-18975:
Plastid-encoded RNA polymerase (Region 4)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-18976:
Plastid-encoded RNA polymerase (Region 5)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-18982:
Plastid-encoded RNA polymerase (Region 6)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-18983:
Plastid-encoded RNA polymerase (Region 8)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-18985:
Plastid-encoded RNA polymerase (Region 9)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-18986:
Plastid-encoded RNA polymerase transcription elongation complex (Region 1)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-18995:
Plastid-encoded RNA polymerase transcription elongation complex (Region 2)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-18996:
Plastid-encoded RNA polymerase transcription elongation complex (Region 3)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-18998:
Plastid-encoded RNA polymerase (Region 7)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-19007:
Plastid-encoded RNA polymerase transcription elongation complex (Region 4)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-19010:
Plastid-encoded RNA polymerase transcription elongation complex (PAP2-mRNA)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

PDB-8r5o:
Plastid-encoded RNA polymerase
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

PDB-8r6s:
Plastid-encoded RNA polymerase (Integrated model)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

PDB-8rdj:
Plastid-encoded RNA polymerase transcription elongation complex (Integrated model)
Method: single particle / : Webster MW, Pramanick I, Vergara-Cruces A

EMDB-37386:
The cryo-EM structure of the Nicotiana tabacum PEP-PAP
Method: single particle / : Wu XX, Zhang Y

EMDB-37387:
The cryo-EM structure of the Nicotiana tabacum PEP-PAP-TEC1
Method: single particle / : Wu XX, Zhang Y

EMDB-37388:
The cryo-EM structure of the Nicotiana tabacum PEP-PAP-TEC2
Method: single particle / : Wu XX, Zhang Y

PDB-8w9z:
The cryo-EM structure of the Nicotiana tabacum PEP-PAP
Method: single particle / : Wu XX, Zhang Y

PDB-8wa0:
The cryo-EM structure of the Nicotiana tabacum PEP-PAP-TEC1
Method: single particle / : Wu XX, Zhang Y

PDB-8wa1:
The cryo-EM structure of the Nicotiana tabacum PEP-PAP-TEC2
Method: single particle / : Wu XX, Zhang Y

EMDB-17111:
Cryo-EM structure of the wild-type alpha-synuclein fibril.
Method: helical / : Pesch V, Reithofer S, Ma L, Flores-Fernandez JM, Oezduezenciler P, Busch Y, Lien Y, Rudtke O, Frieg B, Schroeder GF, Wille H, Tamgueney G

PDB-8oqi:
Cryo-EM structure of the wild-type alpha-synuclein fibril.
Method: helical / : Pesch V, Reithofer S, Ma L, Flores-Fernandez JM, Oezduezenciler P, Busch Y, Lien Y, Rudtke O, Frieg B, Schroeder GF, Wille H, Tamgueney G

EMDB-42820:
SARS-CoV-2 5' proximal stem-loop 5 and 6 with SL5b extended
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-37444:
Cryo-EM structure of PAO1-ImcA with GMPCPP
Method: single particle / : Zhan XL, Zhang K, Wang CC, Fan Q, Tang XJ, Zhang X, Wang K, Fu Y, Liang HH

PDB-8wcn:
Cryo-EM structure of PAO1-ImcA with GMPCPP
Method: single particle / : Zhan XL, Zhang K, Wang CC, Fan Q, Tang XJ, Zhang X, Wang K, Fu Y, Liang HH

EMDB-41730:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Ribavirin
Method: single particle / : Wright NJ, Lee SY

EMDB-41731:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in MSP2N2 nanodiscs, apo state
Method: single particle / : Wright NJ, Lee SY

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more