Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

MCY

Summary
Name:5-METHYL-2'-DEOXYCYTIDINE
Formula:C10 H15 N3 O4
Formal charge:0
Formula weight:241.244 Da
Component type:DNA LINKING

Chemical Identifiers

ProgramVersionName
ACDLabs10.042'-deoxy-5-methylcytidine
OpenEye OEToolkits1.5.04-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methyl-pyrimidin-2-one

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs10.04O=C1N=C(N)C(=CN1C2OC(C(O)C2)CO)C
SMILES_CANONICALCACTVS3.341CC1=CN([C@H]2C[C@H](O)[C@@H](CO)O2)C(=O)N=C1N
SMILESCACTVS3.341CC1=CN([CH]2C[CH](O)[CH](CO)O2)C(=O)N=C1N
SMILES_CANONICALOpenEye OEToolkits1.5.0CC1=CN(C(=O)N=C1N)[C@H]2C[C@@H]([C@H](O2)CO)O
SMILESOpenEye OEToolkits1.5.0CC1=CN(C(=O)N=C1N)C2CC(C(O2)CO)O
InChIInChI1.03InChI=1S/C10H15N3O4/c1-5-3-13(10(16)12-9(5)11)8-2-6(15)7(4-14)17-8/h3,6-8,14-15H,2,4H2,1H3,(H2,11,12,16)/t6-,7+,8+/m0/s1
InChIKeyInChI1.03LUCHPKXVUGJYGU-XLPZGREQSA-N

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon